RNA–Protein interactions for RNA: ENST00000563184.1

LINC00557-201, long intergenic non-protein coding RNA 557, humanhuman

BASIC

Gene LINC00557, Length 1,279 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00557-201ENST00000563184 ATAD3CQ5T2N8 411 aa4.22□□□□□ -1.73
LINC00557-201ENST00000563184 C12orf60Q5U649 245 aa4.22□□□□□ -1.73
LINC00557-201ENST00000563184 GCNT7Q6ZNI0 430 aa4.22□□□□□ -1.73
LINC00557-201ENST00000563184 KLHL30-AS1Q8NEE0 82 aa4.22□□□□□ -1.73
LINC00557-201ENST00000563184 RHOXF1Q8NHV9 184 aa4.22□□□□□ -1.73
LINC00557-201ENST00000563184 GTSF1Q8WW33 167 aa4.22□□□□□ -1.73
LINC00557-201ENST00000563184 CARD6Q9BX69 1037 aa4.22□□□□□ -1.73
LINC00557-201ENST00000563184 KAT8Q9H7Z6 458 aaKnown RBP4.22□□□□□ -1.73
LINC00557-201ENST00000563184 MEPEQ9NQ76 525 aaPredicted RBP4.22□□□□□ -1.73
LINC00557-201ENST00000563184 TIGARQ9NQ88 270 aa4.22□□□□□ -1.73
LINC00557-201ENST00000563184 TRPV5Q9NQA5 729 aa4.22□□□□□ -1.73
LINC00557-201ENST00000563184 SLC7A10Q9NS82 523 aa4.22□□□□□ -1.73
LINC00557-201ENST00000563184 IMPAD1Q9NX62 359 aa4.22□□□□□ -1.73
LINC00557-201ENST00000563184 DUS2Q9NX74 493 aaKnown RBP4.22□□□□□ -1.73
LINC00557-201ENST00000563184 GHRLQ9UBU3 117 aa4.22□□□□□ -1.73
LINC00557-201ENST00000563184 EXOSC1Q9Y3B2 195 aaKnown RBP4.22□□□□□ -1.73
LINC00557-201ENST00000563184 METP08581 1390 aa4.22□□□□□ -1.73
LINC00557-201ENST00000563184 NCAPD2Q15021 1401 aa4.21□□□□□ -1.73
LINC00557-201ENST00000563184 A0A0U1RQV5 110 aa4.21□□□□□ -1.74
LINC00557-201ENST00000563184 FAM230AA0A1W2PPH8 454 aa4.21□□□□□ -1.74
LINC00557-201ENST00000563184 C19orf81C9J6K1 198 aa4.21□□□□□ -1.74
LINC00557-201ENST00000563184 PHOX2AO14813 284 aa4.21□□□□□ -1.74
LINC00557-201ENST00000563184 TM9SF1O15321 606 aa4.21□□□□□ -1.74
LINC00557-201ENST00000563184 PRAMEF12O95522 483 aa4.21□□□□□ -1.74
LINC00557-201ENST00000563184 THY1P04216 161 aa4.21□□□□□ -1.74
LINC00557-201ENST00000563184 ALPIP09923 528 aa4.21□□□□□ -1.74
LINC00557-201ENST00000563184 UMPSP11172 480 aa4.21□□□□□ -1.74
LINC00557-201ENST00000563184 SLC10A1Q14973 349 aa4.21□□□□□ -1.74
LINC00557-201ENST00000563184 CDKN3Q16667 212 aa4.21□□□□□ -1.74
LINC00557-201ENST00000563184 SLC39A4Q6P5W5 647 aa4.21□□□□□ -1.74
LINC00557-201ENST00000563184 VPS36Q86VN1 386 aa4.21□□□□□ -1.74
LINC00557-201ENST00000563184 UNC5CLQ8IV45 518 aa4.21□□□□□ -1.74
LINC00557-201ENST00000563184 ART4Q93070 314 aa4.21□□□□□ -1.74
LINC00557-201ENST00000563184 CCSER1Q9C0I3 900 aa4.21□□□□□ -1.74
LINC00557-201ENST00000563184 ECT2Q9H8V3 914 aa4.21□□□□□ -1.74
LINC00557-201ENST00000563184 KLRF1Q9NZS2 232 aa4.21□□□□□ -1.74
LINC00557-201ENST00000563184 ATXN10Q9UBB4 475 aa4.21□□□□□ -1.74
LINC00557-201ENST00000563184 NAALAD2Q9Y3Q0 740 aa4.21□□□□□ -1.74
LINC00557-201ENST00000563184 MTF2Q9Y483 593 aaPredicted RBP4.21□□□□□ -1.74
LINC00557-201ENST00000563184 SMAD5-AS1Q9Y6J3 95 aa4.21□□□□□ -1.74
LINC00557-201ENST00000563184 PARD3Q8TEW0 1356 aa4.21□□□□□ -1.74
LINC00557-201ENST00000563184 CUX2O14529 1486 aa4.2□□□□□ -1.74
LINC00557-201ENST00000563184 TRBV7-9A0A0J9YWB2 115 aa4.2□□□□□ -1.74
LINC00557-201ENST00000563184 F8WDY8 70 aa4.2□□□□□ -1.74
LINC00557-201ENST00000563184 TOM1L1O75674 476 aa4.2□□□□□ -1.74
LINC00557-201ENST00000563184 AKR7A3O95154 331 aa4.2□□□□□ -1.74
LINC00557-201ENST00000563184 TRIM16O95361 564 aa4.2□□□□□ -1.74
LINC00557-201ENST00000563184 GJB5O95377 273 aa4.2□□□□□ -1.74
LINC00557-201ENST00000563184 ANXA4P09525 319 aaPredicted RBP4.2□□□□□ -1.74
LINC00557-201ENST00000563184 GIG44P09565 113 aaPredicted RBP4.2□□□□□ -1.74
LINC00557-201ENST00000563184 RRASP10301 218 aa4.2□□□□□ -1.74
LINC00557-201ENST00000563184 ALDH3B2P48448 385 aa4.2□□□□□ -1.74
LINC00557-201ENST00000563184 METAP1P53582 386 aa4.2□□□□□ -1.74
LINC00557-201ENST00000563184 RPS6P62753 249 aaKnown RBP4.2□□□□□ -1.74
LINC00557-201ENST00000563184 RAB35Q15286 201 aa4.2□□□□□ -1.74
LINC00557-201ENST00000563184 CGB2Q6NT52 195 aa4.2□□□□□ -1.74
LINC00557-201ENST00000563184 VN1R17PQ8TDU5 208 aa4.2□□□□□ -1.74
LINC00557-201ENST00000563184 GPN2Q9H9Y4 310 aaPredicted RBP4.2□□□□□ -1.74
LINC00557-201ENST00000563184 SENP1Q9P0U3 644 aa4.2□□□□□ -1.74
LINC00557-201ENST00000563184 BARX2Q9UMQ3 279 aaPredicted RBP4.2□□□□□ -1.74
LINC00557-201ENST00000563184 DYNC1LI1Q9Y6G9 523 aaKnown RBP4.2□□□□□ -1.74
LINC00557-201ENST00000563184 CFAP65Q6ZU64 1925 aaKnown RBP4.19□□□□□ -1.74
LINC00557-201ENST00000563184 BICDL2A1A5D9 508 aa4.19□□□□□ -1.74
LINC00557-201ENST00000563184 EFCAB7A8K855 629 aa4.19□□□□□ -1.74
LINC00557-201ENST00000563184 SLC17A2O00624 439 aa4.19□□□□□ -1.74
LINC00557-201ENST00000563184 CA3P07451 260 aa4.19□□□□□ -1.74
LINC00557-201ENST00000563184 CT45A10P0DMU9 189 aa4.19□□□□□ -1.74
LINC00557-201ENST00000563184 FASP25445 335 aa4.19□□□□□ -1.74
LINC00557-201ENST00000563184 GPC3P51654 580 aa4.19□□□□□ -1.74
LINC00557-201ENST00000563184 CXCL6P80162 114 aa4.19□□□□□ -1.74
LINC00557-201ENST00000563184 IL9RQ01113 521 aa4.19□□□□□ -1.74
LINC00557-201ENST00000563184 EXOSC2Q13868 293 aaKnown RBP4.19□□□□□ -1.74
LINC00557-201ENST00000563184 DPYSQ14117 519 aa4.19□□□□□ -1.74
LINC00557-201ENST00000563184 TFDP1Q14186 410 aa4.19□□□□□ -1.74
LINC00557-201ENST00000563184 TGIF1Q15583 401 aa4.19□□□□□ -1.74
LINC00557-201ENST00000563184 BTNL3Q6UXE8 466 aa4.19□□□□□ -1.74
LINC00557-201ENST00000563184 BAIAP2L2Q6UXY1 529 aa4.19□□□□□ -1.74
LINC00557-201ENST00000563184 Q7L0L9 218 aa4.19□□□□□ -1.74
LINC00557-201ENST00000563184 UBE2Q2Q8WVN8 375 aa4.19□□□□□ -1.74
LINC00557-201ENST00000563184 SELENOMQ8WWX9 145 aa4.19□□□□□ -1.74
LINC00557-201ENST00000563184 PPP1R16AQ96I34 528 aa4.19□□□□□ -1.74
LINC00557-201ENST00000563184 TESK2Q96S53 571 aa4.19□□□□□ -1.74
LINC00557-201ENST00000563184 TM2D1Q9BX74 207 aa4.19□□□□□ -1.74
LINC00557-201ENST00000563184 HCAR1Q9BXC0 346 aa4.19□□□□□ -1.74
LINC00557-201ENST00000563184 RPAP3Q9H6T3 665 aaPredicted RBP4.19□□□□□ -1.74
LINC00557-201ENST00000563184 VAT1LQ9HCJ6 419 aa4.19□□□□□ -1.74
LINC00557-201ENST00000563184 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP4.19□□□□□ -1.74
LINC00557-201ENST00000563184 TAS2R3Q9NYW6 316 aa4.19□□□□□ -1.74
LINC00557-201ENST00000563184 RSPH14Q9UHP6 348 aa4.19□□□□□ -1.74
LINC00557-201ENST00000563184 MGAT4BQ9UQ53 548 aa4.19□□□□□ -1.74
LINC00557-201ENST00000563184 IGHV3-35A0A0C4DH35 117 aa4.18□□□□□ -1.74
LINC00557-201ENST00000563184 RGSL1A5PLK6 1076 aa4.18□□□□□ -1.74
LINC00557-201ENST00000563184 FRG2CA6NGY1 282 aa4.18□□□□□ -1.74
LINC00557-201ENST00000563184 LRRC30A6NM36 301 aa4.18□□□□□ -1.74
LINC00557-201ENST00000563184 ANKRD30BLA7E2S9 258 aa4.18□□□□□ -1.74
LINC00557-201ENST00000563184 G3V3Y1 287 aa4.18□□□□□ -1.74
LINC00557-201ENST00000563184 CHADO15335 359 aa4.18□□□□□ -1.74
LINC00557-201ENST00000563184 LCMT2O60294 686 aaKnown RBP4.18□□□□□ -1.74
LINC00557-201ENST00000563184 VPS26AO75436 327 aa4.18□□□□□ -1.74
LINC00557-201ENST00000563184 SLC2A10O95528 541 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms