RNA–Protein interactions for RNA: ENST00000562609.2

GTF3C1-203, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 2,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-203ENST00000562609 GATAD2BQ8WXI9 593 aa13.22□□□□□ -0.29
GTF3C1-203ENST00000562609 IMP3Q9NV31 184 aaKnown RBP13.22□□□□□ -0.29
GTF3C1-203ENST00000562609 NLGN3Q9NZ94 848 aa13.22□□□□□ -0.29
GTF3C1-203ENST00000562609 NDRG3Q9UGV2 375 aa13.22□□□□□ -0.29
GTF3C1-203ENST00000562609 CRLS1Q9UJA2 301 aa13.22□□□□□ -0.29
GTF3C1-203ENST00000562609 FZD4Q9ULV1 537 aa13.22□□□□□ -0.29
GTF3C1-203ENST00000562609 ZFR2Q9UPR6 939 aaKnown RBP13.22□□□□□ -0.29
GTF3C1-203ENST00000562609 SF3B6Q9Y3B4 125 aaKnown RBP13.22□□□□□ -0.29
GTF3C1-203ENST00000562609 LOC730098B7Z3J9 87 aa13.21□□□□□ -0.29
GTF3C1-203ENST00000562609 FFAR2O15552 330 aa13.21□□□□□ -0.29
GTF3C1-203ENST00000562609 IGSF6O95976 241 aa13.21□□□□□ -0.29
GTF3C1-203ENST00000562609 SDC1P18827 310 aa13.21□□□□□ -0.29
GTF3C1-203ENST00000562609 GSTM5P46439 218 aa13.21□□□□□ -0.29
GTF3C1-203ENST00000562609 SWI5Q1ZZU3 235 aa13.21□□□□□ -0.29
GTF3C1-203ENST00000562609 MBOAT1Q6ZNC8 495 aa13.21□□□□□ -0.29
GTF3C1-203ENST00000562609 ZNF687Q8N1G0 1237 aa13.21□□□□□ -0.29
GTF3C1-203ENST00000562609 ZNF527Q8NB42 609 aa13.21□□□□□ -0.29
GTF3C1-203ENST00000562609 WDR20Q8TBZ3 569 aa13.21□□□□□ -0.29
GTF3C1-203ENST00000562609 BADQ92934 168 aa13.21□□□□□ -0.29
GTF3C1-203ENST00000562609 TPT1P8Q9HAU6 139 aa13.21□□□□□ -0.29
GTF3C1-203ENST00000562609 BIN3Q9NQY0 253 aa13.21□□□□□ -0.29
GTF3C1-203ENST00000562609 ELOVL2Q9NXB9 296 aa13.21□□□□□ -0.29
GTF3C1-203ENST00000562609 BABAM2Q9NXR7 383 aa13.21□□□□□ -0.29
GTF3C1-203ENST00000562609 RHCGQ9UBD6 479 aa13.21□□□□□ -0.29
GTF3C1-203ENST00000562609 PRKAG2Q9UGJ0 569 aa13.21□□□□□ -0.29
GTF3C1-203ENST00000562609 ING1Q9UK53 422 aaPredicted RBP13.21□□□□□ -0.29
GTF3C1-203ENST00000562609 KCNK7Q9Y2U2 307 aa13.21□□□□□ -0.29
GTF3C1-203ENST00000562609 SHISA3A0PJX4 238 aa13.21□□□□□ -0.29
GTF3C1-203ENST00000562609 PRAMEF25A6NGN4 478 aa13.21□□□□□ -0.29
GTF3C1-203ENST00000562609 MTX2O75431 263 aa13.21□□□□□ -0.29
GTF3C1-203ENST00000562609 GCM2O75603 506 aaPredicted RBP13.21□□□□□ -0.29
GTF3C1-203ENST00000562609 SIX6O95475 246 aa13.21□□□□□ -0.29
GTF3C1-203ENST00000562609 HIST1H2AGP0C0S8 130 aaPredicted RBP13.21□□□□□ -0.29
GTF3C1-203ENST00000562609 RAB3BP20337 219 aa13.21□□□□□ -0.29
GTF3C1-203ENST00000562609 HIST1H2ADP20671 130 aa13.21□□□□□ -0.29
GTF3C1-203ENST00000562609 AHCYP23526 432 aa13.21□□□□□ -0.29
GTF3C1-203ENST00000562609 CTNNB1P35222 781 aa13.21□□□□□ -0.29
GTF3C1-203ENST00000562609 CCR6P51684 374 aa13.21□□□□□ -0.29
GTF3C1-203ENST00000562609 SNRPGP62308 76 aaKnown RBP13.21□□□□□ -0.29
GTF3C1-203ENST00000562609 CPSF6Q16630 551 aaKnown RBP eCLIP13.21□□□□□ -0.29
GTF3C1-203ENST00000562609 IFI44LQ53G44 452 aa13.21□□□□□ -0.29
GTF3C1-203ENST00000562609 HIST2H2AA3Q6FI13 130 aa13.21□□□□□ -0.29
GTF3C1-203ENST00000562609 CRTC1Q6UUV9 634 aa13.21□□□□□ -0.29
GTF3C1-203ENST00000562609 LYPD4Q6UWN0 246 aa13.21□□□□□ -0.29
GTF3C1-203ENST00000562609 ZER1Q7Z7L7 766 aa13.21□□□□□ -0.29
GTF3C1-203ENST00000562609 TCEANCQ8N8B7 351 aa13.21□□□□□ -0.29
GTF3C1-203ENST00000562609 HIST1H2AHQ96KK5 128 aa13.21□□□□□ -0.29
GTF3C1-203ENST00000562609 DMRTA2Q96SC8 542 aa13.21□□□□□ -0.29
GTF3C1-203ENST00000562609 HIST1H2AJQ99878 128 aa13.21□□□□□ -0.29
GTF3C1-203ENST00000562609 NKX6-2Q9C056 277 aaPredicted RBP13.21□□□□□ -0.29
GTF3C1-203ENST00000562609 LATS2Q9NRM7 1088 aa13.21□□□□□ -0.29
GTF3C1-203ENST00000562609 ACER3Q9NUN7 267 aa13.21□□□□□ -0.29
GTF3C1-203ENST00000562609 TMEM5Q9Y2B1 443 aa13.21□□□□□ -0.29
GTF3C1-203ENST00000562609 WNT6Q9Y6F9 365 aa13.21□□□□□ -0.29
GTF3C1-203ENST00000562609 PRUNE2Q8WUY3 3088 aa13.21□□□□□ -0.3
GTF3C1-203ENST00000562609 UPK3BL1B0FP48 263 aa13.21□□□□□ -0.3
GTF3C1-203ENST00000562609 CHURC1-FNTBB4DL54 471 aa13.21□□□□□ -0.3
GTF3C1-203ENST00000562609 UPK3BL2E5RIL1 263 aa13.21□□□□□ -0.3
GTF3C1-203ENST00000562609 STK25O00506 426 aa13.21□□□□□ -0.3
GTF3C1-203ENST00000562609 TAPBPO15533 448 aa13.21□□□□□ -0.3
GTF3C1-203ENST00000562609 SLC19A2O60779 497 aa13.21□□□□□ -0.3
GTF3C1-203ENST00000562609 ECDO95905 644 aaPredicted RBP13.21□□□□□ -0.3
GTF3C1-203ENST00000562609 SOD1P00441 154 aa13.21□□□□□ -0.3
GTF3C1-203ENST00000562609 EPCAMP16422 314 aa13.21□□□□□ -0.3
GTF3C1-203ENST00000562609 PSMA3P25788 255 aa13.21□□□□□ -0.3
GTF3C1-203ENST00000562609 SERPINA4P29622 427 aa13.21□□□□□ -0.3
GTF3C1-203ENST00000562609 CDKN3Q16667 212 aa13.21□□□□□ -0.3
GTF3C1-203ENST00000562609 OR52I1Q8NGK6 324 aa13.21□□□□□ -0.3
GTF3C1-203ENST00000562609 TEX47Q8TBZ9 253 aa13.21□□□□□ -0.3
GTF3C1-203ENST00000562609 CYB5D2Q8WUJ1 264 aa13.21□□□□□ -0.3
GTF3C1-203ENST00000562609 CNOT9Q92600 299 aaKnown RBP13.21□□□□□ -0.3
GTF3C1-203ENST00000562609 EGFL8Q99944 293 aa13.21□□□□□ -0.3
GTF3C1-203ENST00000562609 CACNG6Q9BXT2 260 aa13.21□□□□□ -0.3
GTF3C1-203ENST00000562609 SYNDIG1Q9H7V2 258 aa13.21□□□□□ -0.3
GTF3C1-203ENST00000562609 NMNAT1Q9HAN9 279 aaPredicted RBP13.21□□□□□ -0.3
GTF3C1-203ENST00000562609 GSN-AS1Q9NRJ2 163 aa13.21□□□□□ -0.3
GTF3C1-203ENST00000562609 D6RAR5 112 aa13.2□□□□□ -0.3
GTF3C1-203ENST00000562609 GADD45GO95257 159 aa13.2□□□□□ -0.3
GTF3C1-203ENST00000562609 HPXP02790 462 aa13.2□□□□□ -0.3
GTF3C1-203ENST00000562609 MYOGP15173 224 aa13.2□□□□□ -0.3
GTF3C1-203ENST00000562609 ZNF7P17097 686 aaPredicted RBP13.2□□□□□ -0.3
GTF3C1-203ENST00000562609 ATP5A1P25705 553 aaKnown RBP13.2□□□□□ -0.3
GTF3C1-203ENST00000562609 VIPR1P32241 457 aa13.2□□□□□ -0.3
GTF3C1-203ENST00000562609 CASP9P55211 416 aa13.2□□□□□ -0.3
GTF3C1-203ENST00000562609 WNT4P56705 351 aa13.2□□□□□ -0.3
GTF3C1-203ENST00000562609 SMAD2Q15796 467 aaKnown RBP13.2□□□□□ -0.3
GTF3C1-203ENST00000562609 SBSNQ6UWP8 590 aa13.2□□□□□ -0.3
GTF3C1-203ENST00000562609 CEACAM20Q6UY09 585 aa13.2□□□□□ -0.3
GTF3C1-203ENST00000562609 MCATQ8IVS2 390 aaKnown RBP13.2□□□□□ -0.3
GTF3C1-203ENST00000562609 FAM9CQ8IZT9 166 aa13.2□□□□□ -0.3
GTF3C1-203ENST00000562609 SLC6A5Q9Y345 797 aa13.2□□□□□ -0.3
GTF3C1-203ENST00000562609 DHRS7Q9Y394 339 aa13.2□□□□□ -0.3
GTF3C1-203ENST00000562609 RAB19A4D1S5 217 aa13.2□□□□□ -0.3
GTF3C1-203ENST00000562609 A8MVJ9 347 aa13.2□□□□□ -0.3
GTF3C1-203ENST00000562609 ATG12O94817 140 aa13.2□□□□□ -0.3
GTF3C1-203ENST00000562609 SNAPINO95295 136 aa13.2□□□□□ -0.3
GTF3C1-203ENST00000562609 FGBP02675 491 aa13.2□□□□□ -0.3
GTF3C1-203ENST00000562609 H2AFB2P0C5Z0 115 aa13.2□□□□□ -0.3
GTF3C1-203ENST00000562609 NR2F6P10588 404 aa13.2□□□□□ -0.3
GTF3C1-203ENST00000562609 PRPS2P11908 318 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms