RNA–Protein interactions for RNA: ENST00000562540.1

DENND4A-205, Transcript of DENN domain containing 4A, humanhuman

TSL 2

Gene DENND4A, Length 629 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4A-205ENST00000562540 HOXB7P09629 217 aa2.2□□□□□ -2.06
DENND4A-205ENST00000562540 RALAP11233 206 aa2.2□□□□□ -2.06
DENND4A-205ENST00000562540 CYP11B1P15538 503 aa2.2□□□□□ -2.06
DENND4A-205ENST00000562540 MGMTP16455 207 aa2.2□□□□□ -2.06
DENND4A-205ENST00000562540 SDC1P18827 310 aa2.2□□□□□ -2.06
DENND4A-205ENST00000562540 AKT2P31751 481 aa2.2□□□□□ -2.06
DENND4A-205ENST00000562540 IL2RGP31785 369 aa2.2□□□□□ -2.06
DENND4A-205ENST00000562540 ACVR1BP36896 505 aa2.2□□□□□ -2.06
DENND4A-205ENST00000562540 ALDH3B2P48448 385 aa2.2□□□□□ -2.06
DENND4A-205ENST00000562540 KRT6CP48668 564 aa2.2□□□□□ -2.06
DENND4A-205ENST00000562540 HERVK_113P63132 956 aa2.2□□□□□ -2.06
DENND4A-205ENST00000562540 ERVK-8P63133 956 aa2.2□□□□□ -2.06
DENND4A-205ENST00000562540 SRYQ05066 204 aa2.2□□□□□ -2.06
DENND4A-205ENST00000562540 WASHC5Q12768 1159 aa2.2□□□□□ -2.06
DENND4A-205ENST00000562540 SNX1Q13596 522 aa2.2□□□□□ -2.06
DENND4A-205ENST00000562540 PAN3Q58A45 887 aaKnown RBP2.2□□□□□ -2.06
DENND4A-205ENST00000562540 BEND6Q5SZJ8 279 aaPredicted RBP2.2□□□□□ -2.06
DENND4A-205ENST00000562540 PNCKQ6P2M8 343 aa2.2□□□□□ -2.06
DENND4A-205ENST00000562540 FAM159AQ6UWV7 190 aa2.2□□□□□ -2.06
DENND4A-205ENST00000562540 OLFM4Q6UX06 510 aa2.2□□□□□ -2.06
DENND4A-205ENST00000562540 WDR88Q6ZMY6 472 aa2.2□□□□□ -2.06
DENND4A-205ENST00000562540 WDR36Q8NI36 951 aaKnown RBP2.2□□□□□ -2.06
DENND4A-205ENST00000562540 DLX4Q92988 240 aaPredicted RBP2.2□□□□□ -2.06
DENND4A-205ENST00000562540 C11orf24Q96F05 449 aaPredicted RBP2.2□□□□□ -2.06
DENND4A-205ENST00000562540 HCAR1Q9BXC0 346 aa2.2□□□□□ -2.06
DENND4A-205ENST00000562540 ERVK-6Q9BXR3 956 aa2.2□□□□□ -2.06
DENND4A-205ENST00000562540 XPO4Q9C0E2 1151 aaKnown RBP2.2□□□□□ -2.06
DENND4A-205ENST00000562540 ELOVL4Q9GZR5 314 aa2.2□□□□□ -2.06
DENND4A-205ENST00000562540 IKZF5Q9H5V7 419 aa2.2□□□□□ -2.06
DENND4A-205ENST00000562540 TMEM231Q9H6L2 316 aa2.2□□□□□ -2.06
DENND4A-205ENST00000562540 EXOSC3Q9NQT5 275 aaKnown RBP2.2□□□□□ -2.06
DENND4A-205ENST00000562540 FAM114A2Q9NRY5 505 aa2.2□□□□□ -2.06
DENND4A-205ENST00000562540 ANO10Q9NW15 660 aa2.2□□□□□ -2.06
DENND4A-205ENST00000562540 Q9UF83 564 aa2.2□□□□□ -2.06
DENND4A-205ENST00000562540 CCPG1Q9ULG6 757 aa2.2□□□□□ -2.06
DENND4A-205ENST00000562540 KNSTRNQ9Y448 316 aa2.2□□□□□ -2.06
DENND4A-205ENST00000562540 RAI1Q7Z5J4 1906 aaPredicted RBP2.2□□□□□ -2.06
DENND4A-205ENST00000562540 ZMYM6O95789 1325 aa2.19□□□□□ -2.06
DENND4A-205ENST00000562540 PTPRUQ92729 1446 aa2.19□□□□□ -2.06
DENND4A-205ENST00000562540 FRG2CA6NGY1 282 aa2.19□□□□□ -2.06
DENND4A-205ENST00000562540 SLC17A2O00624 439 aa2.19□□□□□ -2.06
DENND4A-205ENST00000562540 SSX5O60225 188 aa2.19□□□□□ -2.06
DENND4A-205ENST00000562540 SLC2A10O95528 541 aa2.19□□□□□ -2.06
DENND4A-205ENST00000562540 ALPPP05187 535 aa2.19□□□□□ -2.06
DENND4A-205ENST00000562540 SLC35G4P0C7Q5 338 aa2.19□□□□□ -2.06
DENND4A-205ENST00000562540 ALPPL2P10696 532 aa2.19□□□□□ -2.06
DENND4A-205ENST00000562540 VDRP11473 427 aa2.19□□□□□ -2.06
DENND4A-205ENST00000562540 PRDX6P30041 224 aa2.19□□□□□ -2.06
DENND4A-205ENST00000562540 PRDX2P32119 198 aa2.19□□□□□ -2.06
DENND4A-205ENST00000562540 HSPA1LP34931 641 aa2.19□□□□□ -2.06
DENND4A-205ENST00000562540 ATP6V1E1P36543 226 aa2.19□□□□□ -2.06
DENND4A-205ENST00000562540 RGRP47804 291 aa2.19□□□□□ -2.06
DENND4A-205ENST00000562540 OR1D4P47884 311 aa2.19□□□□□ -2.06
DENND4A-205ENST00000562540 POU3F4P49335 361 aa2.19□□□□□ -2.06
DENND4A-205ENST00000562540 STK19P49842 368 aaPredicted RBP2.19□□□□□ -2.06
DENND4A-205ENST00000562540 PUDPQ08623 228 aa2.19□□□□□ -2.06
DENND4A-205ENST00000562540 ZP4Q12836 540 aa2.19□□□□□ -2.06
DENND4A-205ENST00000562540 ASAH1Q13510 395 aa2.19□□□□□ -2.06
DENND4A-205ENST00000562540 RAB35Q15286 201 aa2.19□□□□□ -2.06
DENND4A-205ENST00000562540 PKN2Q16513 984 aaKnown RBP2.19□□□□□ -2.06
DENND4A-205ENST00000562540 OR6B2Q6IFH4 312 aa2.19□□□□□ -2.06
DENND4A-205ENST00000562540 C1orf186Q6ZWK4 172 aa2.19□□□□□ -2.06
DENND4A-205ENST00000562540 ADGRD2Q7Z7M1 963 aa2.19□□□□□ -2.06
DENND4A-205ENST00000562540 VASH2Q86V25 355 aa2.19□□□□□ -2.06
DENND4A-205ENST00000562540 PARGQ86W56 976 aa2.19□□□□□ -2.06
DENND4A-205ENST00000562540 PRR22Q8IZ63 422 aa2.19□□□□□ -2.06
DENND4A-205ENST00000562540 ARFGAP2Q8N6H7 521 aa2.19□□□□□ -2.06
DENND4A-205ENST00000562540 CCDC26Q8TAB7 109 aa2.19□□□□□ -2.06
DENND4A-205ENST00000562540 TADA1Q96BN2 335 aa2.19□□□□□ -2.06
DENND4A-205ENST00000562540 FAF2Q96CS3 445 aa2.19□□□□□ -2.06
DENND4A-205ENST00000562540 CCDC51Q96ER9 411 aa2.19□□□□□ -2.06
DENND4A-205ENST00000562540 DNAJA3Q96EY1 480 aa2.19□□□□□ -2.06
DENND4A-205ENST00000562540 SPXQ9BT56 116 aa2.19□□□□□ -2.06
DENND4A-205ENST00000562540 WRAP53Q9BUR4 548 aaKnown RBP2.19□□□□□ -2.06
DENND4A-205ENST00000562540 ATG10Q9H0Y0 220 aa2.19□□□□□ -2.06
DENND4A-205ENST00000562540 OPN3Q9H1Y3 402 aaPredicted RBP2.19□□□□□ -2.06
DENND4A-205ENST00000562540 DUS2Q9NX74 493 aaKnown RBP2.19□□□□□ -2.06
DENND4A-205ENST00000562540 GDAP2Q9NXN4 497 aa2.19□□□□□ -2.06
DENND4A-205ENST00000562540 VNN3Q9NY84 501 aa2.19□□□□□ -2.06
DENND4A-205ENST00000562540 IL20RAQ9UHF4 553 aa2.19□□□□□ -2.06
DENND4A-205ENST00000562540 KLHL21Q9UJP4 597 aa2.19□□□□□ -2.06
DENND4A-205ENST00000562540 BARX2Q9UMQ3 279 aaPredicted RBP2.19□□□□□ -2.06
DENND4A-205ENST00000562540 SPAG9O60271 1321 aaKnown RBP2.18□□□□□ -2.06
DENND4A-205ENST00000562540 TTC26A0AVF1 554 aa2.18□□□□□ -2.06
DENND4A-205ENST00000562540 FBLL1A6NHQ2 334 aaKnown RBP2.18□□□□□ -2.06
DENND4A-205ENST00000562540 FAM220BPB1ANY3 271 aa2.18□□□□□ -2.06
DENND4A-205ENST00000562540 H0Y9J4 135 aa2.18□□□□□ -2.06
DENND4A-205ENST00000562540 HDAC3O15379 428 aa2.18□□□□□ -2.06
DENND4A-205ENST00000562540 ADAM12O43184 909 aa2.18□□□□□ -2.06
DENND4A-205ENST00000562540 TOXO94900 526 aa2.18□□□□□ -2.06
DENND4A-205ENST00000562540 PGK1P00558 417 aa2.18□□□□□ -2.06
DENND4A-205ENST00000562540 MT-ND3P03897 115 aa2.18□□□□□ -2.06
DENND4A-205ENST00000562540 IGFBP1P08833 259 aaPredicted RBP2.18□□□□□ -2.06
DENND4A-205ENST00000562540 STMN1P16949 149 aa2.18□□□□□ -2.06
DENND4A-205ENST00000562540 ZNF19P17023 458 aa2.18□□□□□ -2.06
DENND4A-205ENST00000562540 IGHV1-2P23083 117 aa2.18□□□□□ -2.06
DENND4A-205ENST00000562540 PTBP1P26599 531 aaKnown RBP eCLIP2.18□□□□□ -2.06
DENND4A-205ENST00000562540 HNRNPA3P51991 378 aaKnown RBP2.18□□□□□ -2.06
DENND4A-205ENST00000562540 YBEYP58557 167 aaPredicted RBP2.18□□□□□ -2.06
DENND4A-205ENST00000562540 ERVPABLB-1P60509 514 aa2.18□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms