RNA–Protein interactions for RNA: ENST00000561751.1

CDH1-203, Transcript of cadherin 1, humanhuman

TSL 4

Gene CDH1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-203ENST00000561751 C1GALT1C1Q96EU7 318 aa6.85□□□□□ -1.31
CDH1-203ENST00000561751 ELMOD3Q96FG2 381 aa6.85□□□□□ -1.31
CDH1-203ENST00000561751 PFDN5Q99471 154 aa6.85□□□□□ -1.31
CDH1-203ENST00000561751 POLDIP3Q9BY77 421 aaKnown RBP6.85□□□□□ -1.31
CDH1-203ENST00000561751 SPRTNQ9H040 489 aaPredicted RBP6.85□□□□□ -1.31
CDH1-203ENST00000561751 OSGEPL1Q9H4B0 414 aa6.85□□□□□ -1.31
CDH1-203ENST00000561751 KLHL31Q9H511 634 aa6.85□□□□□ -1.31
CDH1-203ENST00000561751 IKZF5Q9H5V7 419 aa6.85□□□□□ -1.31
CDH1-203ENST00000561751 METTL17Q9H7H0 456 aaPredicted RBP6.85□□□□□ -1.31
CDH1-203ENST00000561751 PRDM5Q9NQX1 630 aaPredicted RBP6.85□□□□□ -1.31
CDH1-203ENST00000561751 SMCO4Q9NRQ5 59 aa6.85□□□□□ -1.31
CDH1-203ENST00000561751 RBM22Q9NW64 420 aaKnown RBP eCLIP6.85□□□□□ -1.31
CDH1-203ENST00000561751 ZSCAN32Q9NX65 697 aa6.85□□□□□ -1.31
CDH1-203ENST00000561751 TAS2R3Q9NYW6 316 aa6.85□□□□□ -1.31
CDH1-203ENST00000561751 MGAT4CQ9UBM8 478 aa6.85□□□□□ -1.31
CDH1-203ENST00000561751 RPS6KB2Q9UBS0 482 aa6.85□□□□□ -1.31
CDH1-203ENST00000561751 ZNF225Q9UK10 706 aa6.85□□□□□ -1.31
CDH1-203ENST00000561751 FBXW11Q9UKB1 542 aa6.85□□□□□ -1.31
CDH1-203ENST00000561751 TNFSF13BQ9Y275 285 aa6.85□□□□□ -1.31
CDH1-203ENST00000561751 NPFFR2Q9Y5X5 522 aa6.85□□□□□ -1.31
CDH1-203ENST00000561751 PTGDR2Q9Y5Y4 395 aa6.85□□□□□ -1.31
CDH1-203ENST00000561751 OTOFQ9HC10 1997 aa6.84□□□□□ -1.31
CDH1-203ENST00000561751 KIAA0100Q14667 2235 aaKnown RBP6.84□□□□□ -1.31
CDH1-203ENST00000561751 IGKV6D-21A0A0A0MT36 114 aa6.84□□□□□ -1.31
CDH1-203ENST00000561751 FAM221BA6H8Z2 402 aa6.84□□□□□ -1.31
CDH1-203ENST00000561751 OR6C75A6NL08 312 aa6.84□□□□□ -1.31
CDH1-203ENST00000561751 SUPT3HB4E1H0 165 aa6.84□□□□□ -1.31
CDH1-203ENST00000561751 GTPBP1O00178 669 aaKnown RBP6.84□□□□□ -1.31
CDH1-203ENST00000561751 TLR4O00206 839 aa6.84□□□□□ -1.31
CDH1-203ENST00000561751 RFXAPO00287 272 aa6.84□□□□□ -1.31
CDH1-203ENST00000561751 EFCAB14O75071 495 aa6.84□□□□□ -1.31
CDH1-203ENST00000561751 ECI2O75521 394 aa6.84□□□□□ -1.31
CDH1-203ENST00000561751 GRAP2O75791 330 aa6.84□□□□□ -1.31
CDH1-203ENST00000561751 POP7O75817 140 aaKnown RBP6.84□□□□□ -1.31
CDH1-203ENST00000561751 RBBP9O75884 186 aa6.84□□□□□ -1.31
CDH1-203ENST00000561751 RECQL4O94761 1208 aa6.84□□□□□ -1.31
CDH1-203ENST00000561751 VNN2O95498 520 aa6.84□□□□□ -1.31
CDH1-203ENST00000561751 MT-ND4LP03901 98 aa6.84□□□□□ -1.31
CDH1-203ENST00000561751 NFICP08651 508 aa6.84□□□□□ -1.31
CDH1-203ENST00000561751 CD63P08962 238 aa6.84□□□□□ -1.31
CDH1-203ENST00000561751 HAPLN1P10915 354 aaPredicted RBP6.84□□□□□ -1.31
CDH1-203ENST00000561751 PAX1P15863 534 aa6.84□□□□□ -1.31
CDH1-203ENST00000561751 ABOP16442 354 aa6.84□□□□□ -1.31
CDH1-203ENST00000561751 RCC1P18754 421 aaPredicted RBP6.84□□□□□ -1.31
CDH1-203ENST00000561751 PSMB1P20618 241 aaKnown RBP6.84□□□□□ -1.31
CDH1-203ENST00000561751 AKAP5P24588 427 aa6.84□□□□□ -1.31
CDH1-203ENST00000561751 GRNP28799 593 aaKnown RBP6.84□□□□□ -1.31
CDH1-203ENST00000561751 MPGP29372 298 aa6.84□□□□□ -1.31
CDH1-203ENST00000561751 MAS1LP35410 378 aa6.84□□□□□ -1.31
CDH1-203ENST00000561751 KCNJ3P48549 501 aa6.84□□□□□ -1.31
CDH1-203ENST00000561751 SULT1E1P49888 294 aa6.84□□□□□ -1.31
CDH1-203ENST00000561751 RAB5CP51148 216 aa6.84□□□□□ -1.31
CDH1-203ENST00000561751 CLCN7P51798 805 aa6.84□□□□□ -1.31
CDH1-203ENST00000561751 ARFIP1P53367 373 aa6.84□□□□□ -1.31
CDH1-203ENST00000561751 HCCSP53701 268 aa6.84□□□□□ -1.31
CDH1-203ENST00000561751 VSX2P58304 361 aaPredicted RBP6.84□□□□□ -1.31
CDH1-203ENST00000561751 SMIM11AP58511 58 aa6.84□□□□□ -1.31
CDH1-203ENST00000561751 TPI1P60174 286 aa6.84□□□□□ -1.31
CDH1-203ENST00000561751 ZP1P60852 638 aa6.84□□□□□ -1.31
CDH1-203ENST00000561751 MRPS10P82664 201 aaKnown RBP6.84□□□□□ -1.31
CDH1-203ENST00000561751 TIAL1Q01085 375 aaKnown RBP eCLIP6.84□□□□□ -1.31
CDH1-203ENST00000561751 TNFRSF17Q02223 184 aa6.84□□□□□ -1.31
CDH1-203ENST00000561751 ITKQ08881 620 aa6.84□□□□□ -1.31
CDH1-203ENST00000561751 FOXO1Q12778 655 aa6.84□□□□□ -1.31
CDH1-203ENST00000561751 SNTB2Q13425 540 aaKnown RBP6.84□□□□□ -1.31
CDH1-203ENST00000561751 ZNF345Q14585 488 aa6.84□□□□□ -1.31
CDH1-203ENST00000561751 SEC23BQ15437 767 aa6.84□□□□□ -1.31
CDH1-203ENST00000561751 TARBP2Q15633 366 aaKnown RBP6.84□□□□□ -1.31
CDH1-203ENST00000561751 HMGN3Q15651 99 aa6.84□□□□□ -1.31
CDH1-203ENST00000561751 ZNF239Q16600 458 aaKnown RBP6.84□□□□□ -1.31
CDH1-203ENST00000561751 NDUFA9Q16795 377 aa6.84□□□□□ -1.31
CDH1-203ENST00000561751 DUOXA1Q1HG43 343 aa6.84□□□□□ -1.31
CDH1-203ENST00000561751 RFTN2Q52LD8 501 aaPredicted RBP6.84□□□□□ -1.31
CDH1-203ENST00000561751 IFI44LQ53G44 452 aa6.84□□□□□ -1.31
CDH1-203ENST00000561751 USP39Q53GS9 565 aaKnown RBP6.84□□□□□ -1.31
CDH1-203ENST00000561751 AFMIDQ63HM1 303 aa6.84□□□□□ -1.31
CDH1-203ENST00000561751 C22orf42Q6IC83 251 aa6.84□□□□□ -1.31
CDH1-203ENST00000561751 GLDNQ6ZMI3 551 aaPredicted RBP6.84□□□□□ -1.31
CDH1-203ENST00000561751 DEF8Q6ZN54 512 aa6.84□□□□□ -1.31
CDH1-203ENST00000561751 TMEM91Q6ZNR0 172 aa6.84□□□□□ -1.31
CDH1-203ENST00000561751 GLCCI1Q86VQ1 547 aa6.84□□□□□ -1.31
CDH1-203ENST00000561751 VSIG10LQ86VR7 867 aa6.84□□□□□ -1.31
CDH1-203ENST00000561751 METTL23Q86XA0 190 aa6.84□□□□□ -1.31
CDH1-203ENST00000561751 PUSL1Q8N0Z8 303 aaKnown RBP6.84□□□□□ -1.31
CDH1-203ENST00000561751 C1orf127Q8N9H9 656 aa6.84□□□□□ -1.31
CDH1-203ENST00000561751 L3MBTL4Q8NA19 623 aa6.84□□□□□ -1.31
CDH1-203ENST00000561751 C11orf65Q8NCR3 313 aa6.84□□□□□ -1.31
CDH1-203ENST00000561751 BEST4Q8NFU0 473 aa6.84□□□□□ -1.31
CDH1-203ENST00000561751 ZNF461Q8TAF7 563 aa6.84□□□□□ -1.31
CDH1-203ENST00000561751 THAP6Q8TBB0 222 aa6.84□□□□□ -1.31
CDH1-203ENST00000561751 HAVCR2Q8TDQ0 301 aa6.84□□□□□ -1.31
CDH1-203ENST00000561751 NR4A3Q92570 626 aa6.84□□□□□ -1.31
CDH1-203ENST00000561751 CNOT9Q92600 299 aaKnown RBP6.84□□□□□ -1.31
CDH1-203ENST00000561751 SENP5Q96HI0 755 aaPredicted RBP6.84□□□□□ -1.31
CDH1-203ENST00000561751 HPDLQ96IR7 371 aa6.84□□□□□ -1.31
CDH1-203ENST00000561751 PIWIL1Q96J94 861 aaKnown RBP6.84□□□□□ -1.31
CDH1-203ENST00000561751 NSUN5Q96P11 429 aaKnown RBP6.84□□□□□ -1.31
CDH1-203ENST00000561751 TAAR9Q96RI9 348 aa6.84□□□□□ -1.31
CDH1-203ENST00000561751 FAM126AQ9BYI3 521 aaPredicted RBP6.84□□□□□ -1.31
CDH1-203ENST00000561751 KRTAP4-8Q9BYQ9 185 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms