RNA–Protein interactions for RNA: ENST00000561036.1

HDDC3-206, Transcript of HD domain containing 3, humanhuman

TSL 3

Gene HDDC3, Length 457 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-206ENST00000561036 C17orf105B2RV13 164 aa15.92■□□□□ 0.14
HDDC3-206ENST00000561036 SLC16A6O15403 523 aa15.92■□□□□ 0.14
HDDC3-206ENST00000561036 KIAA0513O60268 411 aa15.92■□□□□ 0.14
HDDC3-206ENST00000561036 FCMRO60667 390 aa15.92■□□□□ 0.14
HDDC3-206ENST00000561036 SSTR4P31391 388 aa15.92■□□□□ 0.14
HDDC3-206ENST00000561036 CSTF2P33240 577 aaKnown RBP eCLIP15.92■□□□□ 0.14
HDDC3-206ENST00000561036 TRHRP34981 398 aaPredicted RBP15.92■□□□□ 0.14
HDDC3-206ENST00000561036 ELAVL1Q15717 326 aaKnown RBP15.92■□□□□ 0.14
HDDC3-206ENST00000561036 ZSWIM7Q19AV6 140 aa15.92■□□□□ 0.14
HDDC3-206ENST00000561036 EXOC3L2Q2M3D2 409 aa15.92■□□□□ 0.14
HDDC3-206ENST00000561036 C1orf189Q5VU69 101 aa15.92■□□□□ 0.14
HDDC3-206ENST00000561036 TCEAL6Q6IPX3 200 aa15.92■□□□□ 0.14
HDDC3-206ENST00000561036 TMEM154Q6P9G4 183 aa15.92■□□□□ 0.14
HDDC3-206ENST00000561036 OLIG3Q7RTU3 272 aa15.92■□□□□ 0.14
HDDC3-206ENST00000561036 PPP1R3BQ86XI6 285 aa15.92■□□□□ 0.14
HDDC3-206ENST00000561036 ZNF615Q8N8J6 731 aa15.92■□□□□ 0.14
HDDC3-206ENST00000561036 AGBL5Q8NDL9 886 aa15.92■□□□□ 0.14
HDDC3-206ENST00000561036 RCBTB1Q8NDN9 531 aa15.92■□□□□ 0.14
HDDC3-206ENST00000561036 OR10G2Q8NGC3 310 aa15.92■□□□□ 0.14
HDDC3-206ENST00000561036 RHBDD1Q8TEB9 315 aa15.92■□□□□ 0.14
HDDC3-206ENST00000561036 DOK4Q8TEW6 326 aa15.92■□□□□ 0.14
HDDC3-206ENST00000561036 PHF10Q8WUB8 498 aaKnown RBP15.92■□□□□ 0.14
HDDC3-206ENST00000561036 TCEAL3Q969E4 200 aa15.92■□□□□ 0.14
HDDC3-206ENST00000561036 ART5Q96L15 291 aa15.92■□□□□ 0.14
HDDC3-206ENST00000561036 CNPPD1Q9BV87 410 aa15.92■□□□□ 0.14
HDDC3-206ENST00000561036 OR10A5Q9H207 317 aa15.92■□□□□ 0.14
HDDC3-206ENST00000561036 NMNAT1Q9HAN9 279 aaPredicted RBP15.92■□□□□ 0.14
HDDC3-206ENST00000561036 FTSJ1Q9UET6 329 aa15.92■□□□□ 0.14
HDDC3-206ENST00000561036 MKLN1Q9UL63 735 aa15.92■□□□□ 0.14
HDDC3-206ENST00000561036 TMCC3Q9ULS5 477 aa15.92■□□□□ 0.14
HDDC3-206ENST00000561036 ERVK-19Q9WJR5 959 aa15.92■□□□□ 0.14
HDDC3-206ENST00000561036 CFL2Q9Y281 166 aa15.92■□□□□ 0.14
HDDC3-206ENST00000561036 ZNF443Q9Y2A4 671 aaPredicted RBP15.92■□□□□ 0.14
HDDC3-206ENST00000561036 R4GN57 208 aa15.92■□□□□ 0.14
HDDC3-206ENST00000561036 NCOR1O75376 2440 aa15.92■□□□□ 0.14
HDDC3-206ENST00000561036 LNP1A1A4G5 178 aa15.91■□□□□ 0.14
HDDC3-206ENST00000561036 J3KTA2 159 aa15.91■□□□□ 0.14
HDDC3-206ENST00000561036 FFAR1O14842 300 aa15.91■□□□□ 0.14
HDDC3-206ENST00000561036 BRINP1O60477 761 aa15.91■□□□□ 0.14
HDDC3-206ENST00000561036 UGT2B11O75310 529 aa15.91■□□□□ 0.14
HDDC3-206ENST00000561036 SCRG1O75711 98 aa15.91■□□□□ 0.14
HDDC3-206ENST00000561036 CCNB2O95067 398 aa15.91■□□□□ 0.14
HDDC3-206ENST00000561036 OXSR1O95747 527 aaPredicted RBP15.91■□□□□ 0.14
HDDC3-206ENST00000561036 EPPINO95925 133 aa15.91■□□□□ 0.14
HDDC3-206ENST00000561036 H1F0P07305 194 aaKnown RBP15.91■□□□□ 0.14
HDDC3-206ENST00000561036 GNAO1P09471 354 aa15.91■□□□□ 0.14
HDDC3-206ENST00000561036 YAP1P46937 504 aaKnown RBP15.91■□□□□ 0.14
HDDC3-206ENST00000561036 DCDP81605 110 aaKnown RBP15.91■□□□□ 0.14
HDDC3-206ENST00000561036 MYBPC1Q00872 1141 aa15.91■□□□□ 0.14
HDDC3-206ENST00000561036 PSG6Q00889 435 aa15.91■□□□□ 0.14
HDDC3-206ENST00000561036 KCNAB2Q13303 367 aa15.91■□□□□ 0.14
HDDC3-206ENST00000561036 ZIK1Q3SY52 487 aaPredicted RBP15.91■□□□□ 0.14
HDDC3-206ENST00000561036 MINDY4Q4G0A6 757 aa15.91■□□□□ 0.14
HDDC3-206ENST00000561036 NKAIN1Q4KMZ8 207 aa15.91■□□□□ 0.14
HDDC3-206ENST00000561036 LIN52Q52LA3 116 aa15.91■□□□□ 0.14
HDDC3-206ENST00000561036 MFSD4BQ5TF39 518 aa15.91■□□□□ 0.14
HDDC3-206ENST00000561036 PWWP2BQ6NUJ5 590 aa15.91■□□□□ 0.14
HDDC3-206ENST00000561036 DEF8Q6ZN54 512 aa15.91■□□□□ 0.14
HDDC3-206ENST00000561036 COX15Q7KZN9 410 aa15.91■□□□□ 0.14
HDDC3-206ENST00000561036 VRK2Q86Y07 508 aa15.91■□□□□ 0.14
HDDC3-206ENST00000561036 TMEM151BQ8IW70 566 aa15.91■□□□□ 0.14
HDDC3-206ENST00000561036 TAGAPQ8N103 731 aa15.91■□□□□ 0.14
HDDC3-206ENST00000561036 LINC00471Q8N535 108 aa15.91■□□□□ 0.14
HDDC3-206ENST00000561036 OR4D11Q8NGI4 311 aa15.91■□□□□ 0.14
HDDC3-206ENST00000561036 OR14A16Q8NHC5 309 aa15.91■□□□□ 0.14
HDDC3-206ENST00000561036 VANGL1Q8TAA9 524 aaPredicted RBP15.91■□□□□ 0.14
HDDC3-206ENST00000561036 PTPMT1Q8WUK0 201 aaPredicted RBP15.91■□□□□ 0.14
HDDC3-206ENST00000561036 PIK3R3Q92569 461 aa15.91■□□□□ 0.14
HDDC3-206ENST00000561036 ZG16BQ96DA0 208 aa15.91■□□□□ 0.14
HDDC3-206ENST00000561036 PRRC1Q96M27 445 aa15.91■□□□□ 0.14
HDDC3-206ENST00000561036 SLC46A1Q96NT5 459 aa15.91■□□□□ 0.14
HDDC3-206ENST00000561036 ALPK1Q96QP1 1244 aa15.91■□□□□ 0.14
HDDC3-206ENST00000561036 YTHDF1Q9BYJ9 559 aaKnown RBP15.91■□□□□ 0.14
HDDC3-206ENST00000561036 ARMC7Q9H6L4 198 aa15.91■□□□□ 0.14
HDDC3-206ENST00000561036 KRT84Q9NSB2 600 aa15.91■□□□□ 0.14
HDDC3-206ENST00000561036 C14orf105Q9NVL8 296 aa15.91■□□□□ 0.14
HDDC3-206ENST00000561036 ENOPH1Q9UHY7 261 aa15.91■□□□□ 0.14
HDDC3-206ENST00000561036 HCN4Q9Y3Q4 1203 aa15.91■□□□□ 0.14
HDDC3-206ENST00000561036 SPTBP11277 2137 aa15.91■□□□□ 0.14
HDDC3-206ENST00000561036 SCN2AQ99250 2005 aa15.9■□□□□ 0.14
HDDC3-206ENST00000561036 LOC100130705A0A1B0GUX0 176 aa15.9■□□□□ 0.14
HDDC3-206ENST00000561036 A0A1W2PRQ8 180 aa15.9■□□□□ 0.14
HDDC3-206ENST00000561036 OR2W5A6NFC9 320 aa15.9■□□□□ 0.14
HDDC3-206ENST00000561036 FAAHO00519 579 aa15.9■□□□□ 0.14
HDDC3-206ENST00000561036 KCNK2O95069 426 aa15.9■□□□□ 0.14
HDDC3-206ENST00000561036 CYC1P08574 325 aa15.9■□□□□ 0.14
HDDC3-206ENST00000561036 ZNF806P0C7X5 589 aa15.9■□□□□ 0.14
HDDC3-206ENST00000561036 IL7RP16871 459 aa15.9■□□□□ 0.14
HDDC3-206ENST00000561036 PGDP52209 483 aa15.9■□□□□ 0.14
HDDC3-206ENST00000561036 EEF1A1P68104 462 aaKnown RBP15.9■□□□□ 0.14
HDDC3-206ENST00000561036 OCA2Q04671 838 aa15.9■□□□□ 0.14
HDDC3-206ENST00000561036 DGCR6Q14129 220 aa15.9■□□□□ 0.14
HDDC3-206ENST00000561036 LAPTM4AQ15012 233 aa15.9■□□□□ 0.14
HDDC3-206ENST00000561036 RNF220Q5VTB9 566 aa15.9■□□□□ 0.14
HDDC3-206ENST00000561036 ANKRD34AQ69YU3 496 aa15.9■□□□□ 0.14
HDDC3-206ENST00000561036 PRR23CQ6ZRP0 262 aa15.9■□□□□ 0.14
HDDC3-206ENST00000561036 COMTD1Q86VU5 262 aa15.9■□□□□ 0.14
HDDC3-206ENST00000561036 LACC1Q8IV20 430 aa15.9■□□□□ 0.14
HDDC3-206ENST00000561036 OR6T1Q8NGN1 323 aa15.9■□□□□ 0.14
HDDC3-206ENST00000561036 C16orf52Q8NHV5 167 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms