RNA–Protein interactions for RNA: ENST00000560998.5

RABGGTA-220, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,997 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-220ENST00000560998 LDOC1O95751 146 aaPredicted RBP13.15□□□□□ -0.3
RABGGTA-220ENST00000560998 ACADLP28330 430 aa13.15□□□□□ -0.3
RABGGTA-220ENST00000560998 TIA1P31483 386 aaKnown RBP eCLIP13.15□□□□□ -0.3
RABGGTA-220ENST00000560998 CPTPQ5TA50 214 aa13.15□□□□□ -0.3
RABGGTA-220ENST00000560998 LAPTM4BQ86VI4 370 aa13.15□□□□□ -0.3
RABGGTA-220ENST00000560998 LRRC56Q8IYG6 542 aaPredicted RBP13.15□□□□□ -0.3
RABGGTA-220ENST00000560998 C7orf61Q8IZ16 206 aa13.15□□□□□ -0.3
RABGGTA-220ENST00000560998 LMNTD1Q8N9Z9 388 aa13.15□□□□□ -0.3
RABGGTA-220ENST00000560998 GPR156Q8NFN8 814 aa13.15□□□□□ -0.3
RABGGTA-220ENST00000560998 OR11H4Q8NGC9 324 aa13.15□□□□□ -0.3
RABGGTA-220ENST00000560998 OR6M1Q8NGM8 313 aa13.15□□□□□ -0.3
RABGGTA-220ENST00000560998 OR2L2Q8NH16 312 aa13.15□□□□□ -0.3
RABGGTA-220ENST00000560998 FGF13Q92913 245 aa13.15□□□□□ -0.3
RABGGTA-220ENST00000560998 RIT1Q92963 219 aa13.15□□□□□ -0.3
RABGGTA-220ENST00000560998 ERMAPQ96PL5 475 aaPredicted RBP13.15□□□□□ -0.3
RABGGTA-220ENST00000560998 PIP5K1AQ99755 562 aa13.15□□□□□ -0.3
RABGGTA-220ENST00000560998 DPH2Q9BQC3 489 aaPredicted RBP13.15□□□□□ -0.3
RABGGTA-220ENST00000560998 REG4Q9BYZ8 158 aa13.15□□□□□ -0.3
RABGGTA-220ENST00000560998 SDHAF2Q9NX18 166 aa13.15□□□□□ -0.3
RABGGTA-220ENST00000560998 SLCO1C1Q9NYB5 712 aa13.15□□□□□ -0.3
RABGGTA-220ENST00000560998 COMMD3Q9UBI1 195 aa13.15□□□□□ -0.3
RABGGTA-220ENST00000560998 BTNL2Q9UIR0 455 aa13.15□□□□□ -0.3
RABGGTA-220ENST00000560998 SCP2D1Q9UJQ7 156 aa13.15□□□□□ -0.3
RABGGTA-220ENST00000560998 KIF26AQ9ULI4 1882 aaPredicted RBP13.15□□□□□ -0.3
RABGGTA-220ENST00000560998 GRXCR1A8MXD5 290 aa13.14□□□□□ -0.31
RABGGTA-220ENST00000560998 WWP2O00308 870 aa13.14□□□□□ -0.31
RABGGTA-220ENST00000560998 FOXE1O00358 373 aaPredicted RBP13.14□□□□□ -0.31
RABGGTA-220ENST00000560998 CASC3O15234 703 aaKnown RBP13.14□□□□□ -0.31
RABGGTA-220ENST00000560998 VEGFDO43915 354 aa13.14□□□□□ -0.31
RABGGTA-220ENST00000560998 PTP4A3O75365 173 aa13.14□□□□□ -0.31
RABGGTA-220ENST00000560998 CA3P07451 260 aa13.14□□□□□ -0.31
RABGGTA-220ENST00000560998 C1GALT1C1LP0DN25 315 aa13.14□□□□□ -0.31
RABGGTA-220ENST00000560998 PEPDP12955 493 aa13.14□□□□□ -0.31
RABGGTA-220ENST00000560998 IDSP22304 550 aa13.14□□□□□ -0.31
RABGGTA-220ENST00000560998 AGFG1P52594 562 aaKnown RBP13.14□□□□□ -0.31
RABGGTA-220ENST00000560998 ZNF91Q05481 1191 aa13.14□□□□□ -0.31
RABGGTA-220ENST00000560998 TSTA3Q13630 321 aaPredicted RBP13.14□□□□□ -0.31
RABGGTA-220ENST00000560998 SLBPQ14493 270 aaKnown RBP eCLIP13.14□□□□□ -0.31
RABGGTA-220ENST00000560998 P2RY14Q15391 338 aa13.14□□□□□ -0.31
RABGGTA-220ENST00000560998 OCLNQ16625 522 aa13.14□□□□□ -0.31
RABGGTA-220ENST00000560998 DUSP6Q16828 381 aa13.14□□□□□ -0.31
RABGGTA-220ENST00000560998 LGALSLQ3ZCW2 172 aaPredicted RBP13.14□□□□□ -0.31
RABGGTA-220ENST00000560998 TRMT11Q7Z4G4 463 aaKnown RBP13.14□□□□□ -0.31
RABGGTA-220ENST00000560998 MS4A15Q8N5U1 240 aa13.14□□□□□ -0.31
RABGGTA-220ENST00000560998 OR9Q2Q8NGE9 314 aa13.14□□□□□ -0.31
RABGGTA-220ENST00000560998 OR5T2Q8NGG2 359 aa13.14□□□□□ -0.31
RABGGTA-220ENST00000560998 CEP76Q8TAP6 659 aa13.14□□□□□ -0.31
RABGGTA-220ENST00000560998 EFCAB11Q9BUY7 163 aa13.14□□□□□ -0.31
RABGGTA-220ENST00000560998 ZDHHC5Q9C0B5 715 aa13.14□□□□□ -0.31
RABGGTA-220ENST00000560998 MTIF3Q9H2K0 278 aaKnown RBP13.14□□□□□ -0.31
RABGGTA-220ENST00000560998 DPEP2Q9H4A9 486 aa13.14□□□□□ -0.31
RABGGTA-220ENST00000560998 SERHL2Q9H4I8 314 aa13.14□□□□□ -0.31
RABGGTA-220ENST00000560998 TPT1P8Q9HAU6 139 aa13.14□□□□□ -0.31
RABGGTA-220ENST00000560998 PRM3Q9NNZ6 103 aa13.14□□□□□ -0.31
RABGGTA-220ENST00000560998 GPR34Q9UPC5 381 aa13.14□□□□□ -0.31
RABGGTA-220ENST00000560998 LIPT1Q9Y234 373 aa13.14□□□□□ -0.31
RABGGTA-220ENST00000560998 SNX11Q9Y5W9 270 aa13.14□□□□□ -0.31
RABGGTA-220ENST00000560998 NUBP2Q9Y5Y2 271 aa13.14□□□□□ -0.31
RABGGTA-220ENST00000560998 MEIKINA0A087WXM9 373 aa13.14□□□□□ -0.31
RABGGTA-220ENST00000560998 IRGMA1A4Y4 181 aa13.14□□□□□ -0.31
RABGGTA-220ENST00000560998 MGAT4DA6NG13 374 aa13.14□□□□□ -0.31
RABGGTA-220ENST00000560998 M0R233 179 aa13.14□□□□□ -0.31
RABGGTA-220ENST00000560998 PCDH7O60245 1069 aa13.14□□□□□ -0.31
RABGGTA-220ENST00000560998 HPGDSO60760 199 aa13.14□□□□□ -0.31
RABGGTA-220ENST00000560998 RAB36O95755 333 aa13.14□□□□□ -0.31
RABGGTA-220ENST00000560998 ADAP00813 363 aa13.14□□□□□ -0.31
RABGGTA-220ENST00000560998 PROS1P07225 676 aa13.14□□□□□ -0.31
RABGGTA-220ENST00000560998 P2RY2P41231 377 aa13.14□□□□□ -0.31
RABGGTA-220ENST00000560998 RAG2P55895 527 aa13.14□□□□□ -0.31
RABGGTA-220ENST00000560998 TAP2Q03519 686 aa13.14□□□□□ -0.31
RABGGTA-220ENST00000560998 TPBGQ13641 420 aa13.14□□□□□ -0.31
RABGGTA-220ENST00000560998 GPR176Q14439 515 aa13.14□□□□□ -0.31
RABGGTA-220ENST00000560998 PDGFRLQ15198 375 aa13.14□□□□□ -0.31
RABGGTA-220ENST00000560998 BCL2L15Q5TBC7 163 aa13.14□□□□□ -0.31
RABGGTA-220ENST00000560998 FAM83HQ6ZRV2 1179 aaPredicted RBP13.14□□□□□ -0.31
RABGGTA-220ENST00000560998 USP30Q70CQ3 517 aa13.14□□□□□ -0.31
RABGGTA-220ENST00000560998 C11orf96Q7Z7L8 435 aa13.14□□□□□ -0.31
RABGGTA-220ENST00000560998 OR2T4Q8NH00 348 aa13.14□□□□□ -0.31
RABGGTA-220ENST00000560998 OR52P1PQ8NH57 321 aa13.14□□□□□ -0.31
RABGGTA-220ENST00000560998 CXorf40AQ8TE69 158 aa13.14□□□□□ -0.31
RABGGTA-220ENST00000560998 GEMIN6Q8WXD5 167 aaKnown RBP13.14□□□□□ -0.31
RABGGTA-220ENST00000560998 ACOT12Q8WYK0 555 aa13.14□□□□□ -0.31
RABGGTA-220ENST00000560998 SUSD6Q92537 303 aa13.14□□□□□ -0.31
RABGGTA-220ENST00000560998 AHCYL2Q96HN2 611 aaKnown RBP13.14□□□□□ -0.31
RABGGTA-220ENST00000560998 LINC00052Q96N35 136 aa13.14□□□□□ -0.31
RABGGTA-220ENST00000560998 UBL7Q96S82 380 aaPredicted RBP13.14□□□□□ -0.31
RABGGTA-220ENST00000560998 ATF6BQ99941 703 aa13.14□□□□□ -0.31
RABGGTA-220ENST00000560998 HDAC8Q9BY41 377 aa13.14□□□□□ -0.31
RABGGTA-220ENST00000560998 OR51J1Q9H342 316 aa13.14□□□□□ -0.31
RABGGTA-220ENST00000560998 DMRT3Q9NQL9 472 aa13.14□□□□□ -0.31
RABGGTA-220ENST00000560998 EMC3Q9P0I2 261 aa13.14□□□□□ -0.31
RABGGTA-220ENST00000560998 FZD4Q9ULV1 537 aa13.14□□□□□ -0.31
RABGGTA-220ENST00000560998 SLC6A14Q9UN76 642 aa13.14□□□□□ -0.31
RABGGTA-220ENST00000560998 EXO1Q9UQ84 846 aaKnown RBP13.14□□□□□ -0.31
RABGGTA-220ENST00000560998 NOSIPQ9Y314 301 aaKnown RBP13.14□□□□□ -0.31
RABGGTA-220ENST00000560998 GNG14A0A1W2PPG7 69 aa13.13□□□□□ -0.31
RABGGTA-220ENST00000560998 C1orf226A1L170 272 aa13.13□□□□□ -0.31
RABGGTA-220ENST00000560998 PIPSLA2A3N6 862 aa13.13□□□□□ -0.31
RABGGTA-220ENST00000560998 TBC1D3BA6NDS4 549 aa13.13□□□□□ -0.31
RABGGTA-220ENST00000560998 ANTXRLA6NF34 631 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms