RNA–Protein interactions for RNA: ENST00000560402.1

SMAD3-214, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-214ENST00000560402 TRPS1Q9UHF7 1281 aa12.46□□□□□ -0.41
SMAD3-214ENST00000560402 CNOT11Q9UKZ1 510 aaKnown RBP12.46□□□□□ -0.41
SMAD3-214ENST00000560402 L3MBTL1Q9Y468 752 aa12.46□□□□□ -0.41
SMAD3-214ENST00000560402 ASB4Q9Y574 426 aa12.46□□□□□ -0.41
SMAD3-214ENST00000560402 NINQ8N4C6 2090 aa12.46□□□□□ -0.42
SMAD3-214ENST00000560402 LOC100653049A0A140TA62 436 aa12.45□□□□□ -0.42
SMAD3-214ENST00000560402 LRRC14BA6NHZ5 514 aa12.45□□□□□ -0.42
SMAD3-214ENST00000560402 HSPB2A8KAH6 182 aa12.45□□□□□ -0.42
SMAD3-214ENST00000560402 HRKO00198 91 aa12.45□□□□□ -0.42
SMAD3-214ENST00000560402 SLC28A1O00337 649 aa12.45□□□□□ -0.42
SMAD3-214ENST00000560402 TP53I11O14683 189 aa12.45□□□□□ -0.42
SMAD3-214ENST00000560402 RGS14O43566 566 aa12.45□□□□□ -0.42
SMAD3-214ENST00000560402 KRT34O76011 436 aa12.45□□□□□ -0.42
SMAD3-214ENST00000560402 OR4F21O95013 312 aa12.45□□□□□ -0.42
SMAD3-214ENST00000560402 AIFM1O95831 613 aa12.45□□□□□ -0.42
SMAD3-214ENST00000560402 KRT6AP02538 564 aa12.45□□□□□ -0.42
SMAD3-214ENST00000560402 KRT6BP04259 564 aa12.45□□□□□ -0.42
SMAD3-214ENST00000560402 JUNP05412 331 aaKnown RBP12.45□□□□□ -0.42
SMAD3-214ENST00000560402 FREM3P0C091 2139 aa12.45□□□□□ -0.42
SMAD3-214ENST00000560402 FAM58BPP0C7Q3 252 aa12.45□□□□□ -0.42
SMAD3-214ENST00000560402 SLC35E2P0CK97 266 aa12.45□□□□□ -0.42
SMAD3-214ENST00000560402 BSGP35613 385 aa12.45□□□□□ -0.42
SMAD3-214ENST00000560402 KRT6CP48668 564 aa12.45□□□□□ -0.42
SMAD3-214ENST00000560402 ZNF267Q14586 743 aaPredicted RBP12.45□□□□□ -0.42
SMAD3-214ENST00000560402 SF3B4Q15427 424 aaKnown RBP eCLIP12.45□□□□□ -0.426e-6■□□□□ 11
SMAD3-214ENST00000560402 HSPB2Q16082 182 aa12.45□□□□□ -0.42
SMAD3-214ENST00000560402 UGT3A2Q3SY77 523 aa12.45□□□□□ -0.42
SMAD3-214ENST00000560402 AGKQ53H12 422 aa12.45□□□□□ -0.42
SMAD3-214ENST00000560402 DGAT2L6Q6ZPD8 337 aa12.45□□□□□ -0.42
SMAD3-214ENST00000560402 RNF165Q6ZSG1 346 aa12.45□□□□□ -0.42
SMAD3-214ENST00000560402 LARP4Q71RC2 724 aaKnown RBP eCLIP12.45□□□□□ -0.42
SMAD3-214ENST00000560402 GALNT12Q8IXK2 581 aa12.45□□□□□ -0.42
SMAD3-214ENST00000560402 ULK2Q8IYT8 1036 aa12.45□□□□□ -0.42
SMAD3-214ENST00000560402 FAM9CQ8IZT9 166 aa12.45□□□□□ -0.42
SMAD3-214ENST00000560402 RNF175Q8N4F7 328 aa12.45□□□□□ -0.42
SMAD3-214ENST00000560402 ZNF441Q8N8Z8 693 aa12.45□□□□□ -0.42
SMAD3-214ENST00000560402 OR10G3Q8NGC4 313 aa12.45□□□□□ -0.42
SMAD3-214ENST00000560402 JADE3Q92613 823 aa12.45□□□□□ -0.42
SMAD3-214ENST00000560402 UTP4Q969X6 686 aaKnown RBP12.45□□□□□ -0.42
SMAD3-214ENST00000560402 TP53INP1Q96A56 240 aa12.45□□□□□ -0.42
SMAD3-214ENST00000560402 PPP3R2Q96LZ3 170 aa12.45□□□□□ -0.42
SMAD3-214ENST00000560402 AKTIPQ9H8T0 292 aa12.45□□□□□ -0.42
SMAD3-214ENST00000560402 C2orf92A0A1B0GVN3 265 aa12.44□□□□□ -0.42
SMAD3-214ENST00000560402 AIM2O14862 343 aa12.44□□□□□ -0.42
SMAD3-214ENST00000560402 TMPRSS11DO60235 418 aa12.44□□□□□ -0.42
SMAD3-214ENST00000560402 EEDO75530 441 aaKnown RBP12.44□□□□□ -0.42
SMAD3-214ENST00000560402 PRKRAO75569 313 aaKnown RBP12.44□□□□□ -0.42
SMAD3-214ENST00000560402 CLDN9O95484 217 aa12.44□□□□□ -0.42
SMAD3-214ENST00000560402 STAMBPO95630 424 aa12.44□□□□□ -0.42
SMAD3-214ENST00000560402 RFPL3SP0C7P2 107 aa12.44□□□□□ -0.42
SMAD3-214ENST00000560402 LINC00032P0C843 101 aa12.44□□□□□ -0.42
SMAD3-214ENST00000560402 GDF1P27539 372 aa12.44□□□□□ -0.42
SMAD3-214ENST00000560402 ADH7P40394 386 aa12.44□□□□□ -0.42
SMAD3-214ENST00000560402 NRG3P56975 720 aa12.44□□□□□ -0.42
SMAD3-214ENST00000560402 CPSF6Q16630 551 aaKnown RBP eCLIP12.44□□□□□ -0.42
SMAD3-214ENST00000560402 IMPG1Q17R60 797 aa12.44□□□□□ -0.42
SMAD3-214ENST00000560402 SMU1Q2TAY7 513 aa12.44□□□□□ -0.42
SMAD3-214ENST00000560402 C1orf146Q5VVC0 180 aa12.44□□□□□ -0.42
SMAD3-214ENST00000560402 TMEM198Q66K66 360 aa12.44□□□□□ -0.42
SMAD3-214ENST00000560402 PAGE2Q7Z2X7 111 aa12.44□□□□□ -0.42
SMAD3-214ENST00000560402 WDR53Q7Z5U6 358 aaPredicted RBP12.44□□□□□ -0.42
SMAD3-214ENST00000560402 PACS2Q86VP3 889 aa12.44□□□□□ -0.42
SMAD3-214ENST00000560402 PM20D2Q8IYS1 436 aa12.44□□□□□ -0.42
SMAD3-214ENST00000560402 PGAM4Q8N0Y7 254 aa12.44□□□□□ -0.42
SMAD3-214ENST00000560402 CDYL2Q8N8U2 506 aa12.44□□□□□ -0.42
SMAD3-214ENST00000560402 C17orf47Q8NEP4 570 aa12.44□□□□□ -0.42
SMAD3-214ENST00000560402 TSPEARQ8WU66 669 aa12.44□□□□□ -0.42
SMAD3-214ENST00000560402 NTMT1Q9BV86 223 aa12.44□□□□□ -0.42
SMAD3-214ENST00000560402 SLC6A15Q9H2J7 730 aa12.44□□□□□ -0.42
SMAD3-214ENST00000560402 DCLRE1BQ9H816 532 aa12.44□□□□□ -0.42
SMAD3-214ENST00000560402 PROK2Q9HC23 129 aa12.44□□□□□ -0.42
SMAD3-214ENST00000560402 FOXD3Q9UJU5 478 aaPredicted RBP12.44□□□□□ -0.42
SMAD3-214ENST00000560402 SNX6Q9UNH7 406 aa12.44□□□□□ -0.42
SMAD3-214ENST00000560402 ZFHX3Q15911 3703 aa12.44□□□□□ -0.42
SMAD3-214ENST00000560402 A0A1W2PR48 441 aa12.43□□□□□ -0.42
SMAD3-214ENST00000560402 AHRRA9YTQ3 701 aa12.43□□□□□ -0.42
SMAD3-214ENST00000560402 DVL2O14641 736 aa12.43□□□□□ -0.42
SMAD3-214ENST00000560402 ANGPT2O15123 496 aa12.43□□□□□ -0.42
SMAD3-214ENST00000560402 TRIM3O75382 744 aaPredicted RBP12.43□□□□□ -0.42
SMAD3-214ENST00000560402 SNX4O95219 450 aa12.43□□□□□ -0.42
SMAD3-214ENST00000560402 CLPSP04118 112 aa12.43□□□□□ -0.42
SMAD3-214ENST00000560402 DNAJA1P31689 397 aaKnown RBP12.43□□□□□ -0.42
SMAD3-214ENST00000560402 MRPL19P49406 292 aaKnown RBP12.43□□□□□ -0.42
SMAD3-214ENST00000560402 ASCL1P50553 236 aa12.43□□□□□ -0.42
SMAD3-214ENST00000560402 ART1P52961 327 aa12.43□□□□□ -0.42
SMAD3-214ENST00000560402 FUT7Q11130 342 aa12.43□□□□□ -0.42
SMAD3-214ENST00000560402 FBXL19-AS1Q494R0 122 aa12.43□□□□□ -0.42
SMAD3-214ENST00000560402 HLA-DQA1Q5Y7H0 255 aa12.43□□□□□ -0.42
SMAD3-214ENST00000560402 ARSKQ6UWY0 536 aa12.43□□□□□ -0.42
SMAD3-214ENST00000560402 LACC1Q8IV20 430 aa12.43□□□□□ -0.42
SMAD3-214ENST00000560402 LIX1LQ8IVB5 337 aa12.43□□□□□ -0.42
SMAD3-214ENST00000560402 DEFB107AQ8IZN7 70 aa12.43□□□□□ -0.42
SMAD3-214ENST00000560402 OR4F6Q8NGB9 312 aa12.43□□□□□ -0.42
SMAD3-214ENST00000560402 DIO2Q92813 273 aa12.43□□□□□ -0.42
SMAD3-214ENST00000560402 RCN3Q96D15 328 aa12.43□□□□□ -0.42
SMAD3-214ENST00000560402 HSPBAP1Q96EW2 488 aa12.43□□□□□ -0.42
SMAD3-214ENST00000560402 MARK4Q96L34 752 aa12.43□□□□□ -0.42
SMAD3-214ENST00000560402 ZBTB18Q99592 522 aa12.43□□□□□ -0.42
SMAD3-214ENST00000560402 CXorf21Q9HAI6 301 aa12.43□□□□□ -0.42
SMAD3-214ENST00000560402 TNFRSF12AQ9NP84 129 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms