RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 GRPRP30550 384 aa12.75□□□□□ -0.37
TRAF3-208ENST00000560371 UQCRC1P31930 480 aa12.75□□□□□ -0.37
TRAF3-208ENST00000560371 ACVR1BP36896 505 aa12.75□□□□□ -0.37
TRAF3-208ENST00000560371 ATP6AP1Q15904 470 aa12.75□□□□□ -0.37
TRAF3-208ENST00000560371 NADK2Q4G0N4 442 aa12.75□□□□□ -0.37
TRAF3-208ENST00000560371 CEACAM19Q7Z692 300 aa12.75□□□□□ -0.37
TRAF3-208ENST00000560371 OR9A2Q8NGT5 310 aa12.75□□□□□ -0.37
TRAF3-208ENST00000560371 WDR20Q8TBZ3 569 aa12.75□□□□□ -0.37
TRAF3-208ENST00000560371 KLHL21Q9UJP4 597 aa12.75□□□□□ -0.37
TRAF3-208ENST00000560371 CASP8AP2Q9UKL3 1982 aa12.75□□□□□ -0.37
TRAF3-208ENST00000560371 C1orf105O95561 183 aa12.75□□□□□ -0.37
TRAF3-208ENST00000560371 FASLGP48023 281 aa12.75□□□□□ -0.37
TRAF3-208ENST00000560371 ZNF554Q86TJ5 538 aa12.75□□□□□ -0.37
TRAF3-208ENST00000560371 TMPRSS12Q86WS5 348 aa12.75□□□□□ -0.37
TRAF3-208ENST00000560371 SAMD12Q8N8I0 201 aa12.75□□□□□ -0.37
TRAF3-208ENST00000560371 GALNT11Q8NCW6 608 aa12.75□□□□□ -0.37
TRAF3-208ENST00000560371 OR8J1Q8NGP2 316 aa12.75□□□□□ -0.37
TRAF3-208ENST00000560371 FKBP10Q96AY3 582 aa12.75□□□□□ -0.37
TRAF3-208ENST00000560371 CNN2Q99439 309 aaKnown RBP12.75□□□□□ -0.37
TRAF3-208ENST00000560371 DMRT3Q9NQL9 472 aa12.75□□□□□ -0.37
TRAF3-208ENST00000560371 GVINP1Q7Z2Y8 2422 aa12.75□□□□□ -0.37
TRAF3-208ENST00000560371 AHCTF1Q8WYP5 2266 aa12.75□□□□□ -0.37
TRAF3-208ENST00000560371 RFXAPO00287 272 aa12.75□□□□□ -0.37
TRAF3-208ENST00000560371 GSTT2P0CG29 244 aa12.75□□□□□ -0.37
TRAF3-208ENST00000560371 CD79AP11912 226 aa12.75□□□□□ -0.37
TRAF3-208ENST00000560371 CKMT1AP12532 417 aa12.75□□□□□ -0.37
TRAF3-208ENST00000560371 LEG1Q6P5S2 330 aa12.75□□□□□ -0.37
TRAF3-208ENST00000560371 GALNT6Q8NCL4 622 aa12.75□□□□□ -0.37
TRAF3-208ENST00000560371 TRMT10AQ8TBZ6 339 aaKnown RBP12.75□□□□□ -0.37
TRAF3-208ENST00000560371 USB1Q9BQ65 265 aaKnown RBP12.75□□□□□ -0.37
TRAF3-208ENST00000560371 ZNF700Q9H0M5 742 aa12.75□□□□□ -0.37
TRAF3-208ENST00000560371 ARHGEF15O94989 841 aa12.75□□□□□ -0.37
TRAF3-208ENST00000560371 USF2Q15853 346 aaPredicted RBP12.75□□□□□ -0.37
TRAF3-208ENST00000560371 BCL2L15Q5TBC7 163 aa12.75□□□□□ -0.37
TRAF3-208ENST00000560371 ZNF773Q6PK81 442 aa12.75□□□□□ -0.37
TRAF3-208ENST00000560371 B3GNT9Q6UX72 402 aa12.75□□□□□ -0.37
TRAF3-208ENST00000560371 KCTD9Q7L273 389 aa12.75□□□□□ -0.37
TRAF3-208ENST00000560371 PDSS2Q86YH6 399 aa12.75□□□□□ -0.37
TRAF3-208ENST00000560371 ZNF584Q8IVC4 421 aa12.75□□□□□ -0.37
TRAF3-208ENST00000560371 TCEAL3Q969E4 200 aa12.75□□□□□ -0.37
TRAF3-208ENST00000560371 ARL5BQ96KC2 179 aa12.75□□□□□ -0.37
TRAF3-208ENST00000560371 SH3BGRL2Q9UJC5 107 aa12.75□□□□□ -0.37
TRAF3-208ENST00000560371 ZBTB42B2RXF5 422 aa12.75□□□□□ -0.37
TRAF3-208ENST00000560371 JRKO75564 520 aa12.75□□□□□ -0.37
TRAF3-208ENST00000560371 CSNK1EP49674 416 aaKnown RBP12.75□□□□□ -0.37
TRAF3-208ENST00000560371 EPHA4P54764 986 aa12.75□□□□□ -0.37
TRAF3-208ENST00000560371 RDH14Q9HBH5 336 aa12.75□□□□□ -0.37
TRAF3-208ENST00000560371 ACTL6BO94805 426 aa12.74□□□□□ -0.37
TRAF3-208ENST00000560371 EFR3AQ14156 821 aa12.74□□□□□ -0.37
TRAF3-208ENST00000560371 HS3ST5Q8IZT8 346 aa12.74□□□□□ -0.37
TRAF3-208ENST00000560371 TAMM41Q96BW9 452 aa12.74□□□□□ -0.37
TRAF3-208ENST00000560371 TBC1D20Q96BZ9 403 aa12.74□□□□□ -0.37
TRAF3-208ENST00000560371 SLC41A3Q96GZ6 507 aa12.74□□□□□ -0.37
TRAF3-208ENST00000560371 DMRTB1Q96MA1 342 aa12.74□□□□□ -0.37
TRAF3-208ENST00000560371 CMAHPQ9Y471 501 aa12.74□□□□□ -0.37
TRAF3-208ENST00000560371 ZNF451Q9Y4E5 1061 aa12.74□□□□□ -0.37
TRAF3-208ENST00000560371 ANTXRLA6NF34 631 aa12.74□□□□□ -0.37
TRAF3-208ENST00000560371 ICAM2P13598 275 aa12.74□□□□□ -0.37
TRAF3-208ENST00000560371 GMPRP36959 345 aa12.74□□□□□ -0.37
TRAF3-208ENST00000560371 CTBSQ01459 385 aa12.74□□□□□ -0.37
TRAF3-208ENST00000560371 NPRL3Q12980 569 aa12.74□□□□□ -0.37
TRAF3-208ENST00000560371 BNIP3Q12983 259 aa12.74□□□□□ -0.37
TRAF3-208ENST00000560371 TMEM69Q5SWH9 247 aa12.74□□□□□ -0.37
TRAF3-208ENST00000560371 OR8H3Q8N146 312 aa12.74□□□□□ -0.37
TRAF3-208ENST00000560371 ZNF619Q8N2I2 560 aa12.74□□□□□ -0.37
TRAF3-208ENST00000560371 MYLIPQ8WY64 445 aa12.74□□□□□ -0.37
TRAF3-208ENST00000560371 ATOH1Q92858 354 aaPredicted RBP12.74□□□□□ -0.37
TRAF3-208ENST00000560371 TIMM29Q9BSF4 260 aa12.74□□□□□ -0.37
TRAF3-208ENST00000560371 DNTTIP1Q9H147 329 aa12.74□□□□□ -0.37
TRAF3-208ENST00000560371 PTBP2Q9UKA9 531 aaKnown RBP12.74□□□□□ -0.37
TRAF3-208ENST00000560371 HEMK1Q9Y5R4 338 aaPredicted RBP12.74□□□□□ -0.37
TRAF3-208ENST00000560371 LAMB1P07942 1786 aa12.74□□□□□ -0.37
TRAF3-208ENST00000560371 ZFAND5O76080 213 aa12.74□□□□□ -0.37
TRAF3-208ENST00000560371 ADH7P40394 386 aa12.74□□□□□ -0.37
TRAF3-208ENST00000560371 OR4K13Q8NH42 304 aa12.74□□□□□ -0.37
TRAF3-208ENST00000560371 MUS81Q96NY9 551 aa12.74□□□□□ -0.37
TRAF3-208ENST00000560371 NECAB3Q96P71 396 aaPredicted RBP12.74□□□□□ -0.37
TRAF3-208ENST00000560371 DCBLD2Q96PD2 775 aa12.74□□□□□ -0.37
TRAF3-208ENST00000560371 MAGIXQ9H6Y5 334 aa12.74□□□□□ -0.37
TRAF3-208ENST00000560371 PAK1IP1Q9NWT1 392 aaPredicted RBP12.74□□□□□ -0.37
TRAF3-208ENST00000560371 BAIAP2Q9UQB8 552 aa12.74□□□□□ -0.37
TRAF3-208ENST00000560371 ALG5Q9Y673 324 aa12.74□□□□□ -0.37
TRAF3-208ENST00000560371 ZNFX1Q9P2E3 1918 aaKnown RBP12.74□□□□□ -0.37
TRAF3-208ENST00000560371 LINC01553A4QN01 128 aa12.74□□□□□ -0.37
TRAF3-208ENST00000560371 AQP9O43315 295 aa12.74□□□□□ -0.37
TRAF3-208ENST00000560371 RBBP9O75884 186 aa12.74□□□□□ -0.37
TRAF3-208ENST00000560371 PNMTP11086 282 aa12.74□□□□□ -0.37
TRAF3-208ENST00000560371 STK11Q15831 433 aa12.74□□□□□ -0.37
TRAF3-208ENST00000560371 ADOQ96SZ5 270 aa12.74□□□□□ -0.37
TRAF3-208ENST00000560371 CCM2LQ9NUG4 571 aaPredicted RBP12.74□□□□□ -0.37
TRAF3-208ENST00000560371 SULT2B1O00204 365 aa12.74□□□□□ -0.37
TRAF3-208ENST00000560371 POU3F4P49335 361 aa12.74□□□□□ -0.37
TRAF3-208ENST00000560371 HNRNPA0Q13151 305 aaKnown RBP12.74□□□□□ -0.37
TRAF3-208ENST00000560371 MLF2Q15773 248 aaPredicted RBP12.74□□□□□ -0.37
TRAF3-208ENST00000560371 ZNF829Q3KNS6 432 aaPredicted RBP12.74□□□□□ -0.37
TRAF3-208ENST00000560371 METTL2BQ6P1Q9 378 aaKnown RBP12.74□□□□□ -0.37
TRAF3-208ENST00000560371 LRRN1Q6UXK5 716 aa12.74□□□□□ -0.37
TRAF3-208ENST00000560371 VASH1Q7L8A9 365 aaPredicted RBP12.74□□□□□ -0.37
TRAF3-208ENST00000560371 ABHD12BQ7Z5M8 362 aaPredicted RBP12.74□□□□□ -0.37
TRAF3-208ENST00000560371 TRAPPC6BQ86SZ2 158 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 179.6 ms