RNA–Protein interactions for RNA: ENST00000559754.1

SPG11-218, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 411 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-218ENST00000559754 OR5AU1Q8NGC0 362 aa3.08□□□□□ -1.92
SPG11-218ENST00000559754 OR6S1Q8NH40 331 aa3.08□□□□□ -1.92
SPG11-218ENST00000559754 RAB3IL1Q8TBN0 382 aa3.08□□□□□ -1.92
SPG11-218ENST00000559754 CD99L2Q8TCZ2 262 aa3.08□□□□□ -1.92
SPG11-218ENST00000559754 MAPK15Q8TD08 544 aa3.08□□□□□ -1.92
SPG11-218ENST00000559754 SMAP2Q8WU79 429 aaPredicted RBP3.08□□□□□ -1.92
SPG11-218ENST00000559754 RASL10AQ92737 203 aa3.08□□□□□ -1.92
SPG11-218ENST00000559754 COQ2Q96H96 371 aa3.08□□□□□ -1.92
SPG11-218ENST00000559754 C10orf90Q96M02 699 aa3.08□□□□□ -1.92
SPG11-218ENST00000559754 GSDMAQ96QA5 445 aa3.08□□□□□ -1.92
SPG11-218ENST00000559754 NPY6RQ99463 290 aa3.08□□□□□ -1.92
SPG11-218ENST00000559754 PNNQ9H307 717 aaKnown RBP3.08□□□□□ -1.92
SPG11-218ENST00000559754 MED20Q9H944 212 aa3.08□□□□□ -1.92
SPG11-218ENST00000559754 POLD4Q9HCU8 107 aa3.08□□□□□ -1.92
SPG11-218ENST00000559754 FAM120CQ9NX05 1096 aaKnown RBP3.08□□□□□ -1.92
SPG11-218ENST00000559754 TEX10Q9NXF1 929 aaPredicted RBP3.08□□□□□ -1.92
SPG11-218ENST00000559754 SPATA7Q9P0W8 599 aa3.08□□□□□ -1.92
SPG11-218ENST00000559754 DBF4Q9UBU7 674 aaPredicted RBP3.08□□□□□ -1.92
SPG11-218ENST00000559754 C19orf25Q9UFG5 118 aaPredicted RBP3.08□□□□□ -1.92
SPG11-218ENST00000559754 PRDM4Q9UKN5 801 aa3.08□□□□□ -1.92
SPG11-218ENST00000559754 TP53TG3Q9ULZ0 132 aa3.08□□□□□ -1.92
SPG11-218ENST00000559754 ZNF175Q9Y473 711 aa3.08□□□□□ -1.92
SPG11-218ENST00000559754 RNF123Q5XPI4 1314 aa3.08□□□□□ -1.92
SPG11-218ENST00000559754 IGHV3OR16-10A0A075B7F0 116 aa3.07□□□□□ -1.92
SPG11-218ENST00000559754 PPIAL4CA0A0B4J2A2 164 aa3.07□□□□□ -1.92
SPG11-218ENST00000559754 MTMR11A4FU01 709 aa3.07□□□□□ -1.92
SPG11-218ENST00000559754 SRRM4A7MD48 611 aaKnown RBP3.07□□□□□ -1.92
SPG11-218ENST00000559754 OR1F1O43749 312 aa3.07□□□□□ -1.92
SPG11-218ENST00000559754 TM7SF2O76062 418 aa3.07□□□□□ -1.92
SPG11-218ENST00000559754 STK17BO94768 372 aa3.07□□□□□ -1.92
SPG11-218ENST00000559754 NDUFB10O96000 172 aa3.07□□□□□ -1.92
SPG11-218ENST00000559754 ANXA4P09525 319 aaPredicted RBP3.07□□□□□ -1.92
SPG11-218ENST00000559754 PPIAL4GP0DN37 164 aa3.07□□□□□ -1.92
SPG11-218ENST00000559754 DARSP14868 501 aaKnown RBP3.07□□□□□ -1.92
SPG11-218ENST00000559754 UQCRBP14927 111 aa3.07□□□□□ -1.92
SPG11-218ENST00000559754 FOSL2P15408 326 aa3.07□□□□□ -1.92
SPG11-218ENST00000559754 NT5EP21589 574 aa3.07□□□□□ -1.92
SPG11-218ENST00000559754 PRKACGP22612 351 aa3.07□□□□□ -1.92
SPG11-218ENST00000559754 GLRA1P23415 457 aa3.07□□□□□ -1.92
SPG11-218ENST00000559754 CTNNA2P26232 953 aa3.07□□□□□ -1.92
SPG11-218ENST00000559754 CAPGP40121 348 aa3.07□□□□□ -1.92
SPG11-218ENST00000559754 DNA2P51530 1060 aa3.07□□□□□ -1.92
SPG11-218ENST00000559754 OR1D5P58170 312 aa3.07□□□□□ -1.92
SPG11-218ENST00000559754 CNTN1Q12860 1018 aa3.07□□□□□ -1.92
SPG11-218ENST00000559754 CALCOCO2Q13137 446 aa3.07□□□□□ -1.92
SPG11-218ENST00000559754 SQLEQ14534 574 aa3.07□□□□□ -1.92
SPG11-218ENST00000559754 P2RY14Q15391 338 aa3.07□□□□□ -1.92
SPG11-218ENST00000559754 PARP6Q2NL67 630 aa3.07□□□□□ -1.92
SPG11-218ENST00000559754 MOGAT2Q3SYC2 334 aa3.07□□□□□ -1.92
SPG11-218ENST00000559754 LRRC37A5PQ49AS3 106 aa3.07□□□□□ -1.92
SPG11-218ENST00000559754 LINC01620Q4KN68 170 aa3.07□□□□□ -1.92
SPG11-218ENST00000559754 XKR3Q5GH77 459 aa3.07□□□□□ -1.92
SPG11-218ENST00000559754 ATF7IP2Q5U623 682 aa3.07□□□□□ -1.92
SPG11-218ENST00000559754 ZNF343Q6P1L6 599 aa3.07□□□□□ -1.92
SPG11-218ENST00000559754 SLC25A47Q6Q0C1 308 aa3.07□□□□□ -1.92
SPG11-218ENST00000559754 GPRIN3Q6ZVF9 776 aa3.07□□□□□ -1.92
SPG11-218ENST00000559754 TRPM8Q7Z2W7 1104 aa3.07□□□□□ -1.92
SPG11-218ENST00000559754 SERINC5Q86VE9 423 aa3.07□□□□□ -1.92
SPG11-218ENST00000559754 GPBP1Q86WP2 473 aa3.07□□□□□ -1.92
SPG11-218ENST00000559754 PARP8Q8N3A8 854 aa3.07□□□□□ -1.92
SPG11-218ENST00000559754 TEX26Q8N6G2 289 aa3.07□□□□□ -1.92
SPG11-218ENST00000559754 SYT14Q8NB59 555 aa3.07□□□□□ -1.92
SPG11-218ENST00000559754 OR9K2Q8NGE7 335 aa3.07□□□□□ -1.92
SPG11-218ENST00000559754 C8orf46Q8TAG6 207 aa3.07□□□□□ -1.92
SPG11-218ENST00000559754 RDH11Q8TC12 318 aa3.07□□□□□ -1.92
SPG11-218ENST00000559754 ZNF274Q96GC6 653 aaPredicted RBP3.07□□□□□ -1.92
SPG11-218ENST00000559754 LURAP1Q96LR2 239 aa3.07□□□□□ -1.92
SPG11-218ENST00000559754 ACCSQ96QU6 501 aa3.07□□□□□ -1.92
SPG11-218ENST00000559754 ERGIC2Q96RQ1 377 aa3.07□□□□□ -1.92
SPG11-218ENST00000559754 NPAS2Q99743 824 aa3.07□□□□□ -1.92
SPG11-218ENST00000559754 GSDMCQ9BYG8 508 aa3.07□□□□□ -1.92
SPG11-218ENST00000559754 FAM192AQ9GZU8 254 aa3.07□□□□□ -1.92
SPG11-218ENST00000559754 WWP1Q9H0M0 922 aa3.07□□□□□ -1.92
SPG11-218ENST00000559754 MAGT1Q9H0U3 335 aa3.07□□□□□ -1.92
SPG11-218ENST00000559754 EGLN3Q9H6Z9 239 aa3.07□□□□□ -1.92
SPG11-218ENST00000559754 KAT8Q9H7Z6 458 aaKnown RBP3.07□□□□□ -1.92
SPG11-218ENST00000559754 MEAF6Q9HAF1 191 aa3.07□□□□□ -1.92
SPG11-218ENST00000559754 SGK2Q9HBY8 427 aa3.07□□□□□ -1.92
SPG11-218ENST00000559754 S100A14Q9HCY8 104 aa3.07□□□□□ -1.92
SPG11-218ENST00000559754 GDF3Q9NR23 364 aa3.07□□□□□ -1.92
SPG11-218ENST00000559754 MAN2C1Q9NTJ4 1040 aa3.07□□□□□ -1.92
SPG11-218ENST00000559754 STAU2Q9NUL3 570 aaKnown RBP eCLIP3.07□□□□□ -1.92
SPG11-218ENST00000559754 MUTYHQ9UIF7 546 aa3.07□□□□□ -1.92
SPG11-218ENST00000559754 ELF5Q9UKW6 265 aaPredicted RBP3.07□□□□□ -1.92
SPG11-218ENST00000559754 ZNF346Q9UL40 294 aaKnown RBP3.07□□□□□ -1.92
SPG11-218ENST00000559754 RNF6Q9Y252 685 aa3.07□□□□□ -1.92
SPG11-218ENST00000559754 RNF115Q9Y4L5 304 aa3.07□□□□□ -1.92
SPG11-218ENST00000559754 KIF7Q2M1P5 1343 aa3.07□□□□□ -1.92
SPG11-218ENST00000559754 PIK3R4Q99570 1358 aa3.07□□□□□ -1.92
SPG11-218ENST00000559754 ATP10DQ9P241 1426 aa3.07□□□□□ -1.92
SPG11-218ENST00000559754 NKX6-3A6NJ46 265 aa3.06□□□□□ -1.92
SPG11-218ENST00000559754 MPTX1A8MV57 137 aa3.06□□□□□ -1.92
SPG11-218ENST00000559754 ZSCAN12O43309 604 aa3.06□□□□□ -1.92
SPG11-218ENST00000559754 SPOPO43791 374 aa3.06□□□□□ -1.92
SPG11-218ENST00000559754 NEBLO76041 1014 aa3.06□□□□□ -1.92
SPG11-218ENST00000559754 SEC24AO95486 1093 aa3.06□□□□□ -1.92
SPG11-218ENST00000559754 FGF19O95750 216 aa3.06□□□□□ -1.92
SPG11-218ENST00000559754 RHOXF2BP0C7M4 288 aa3.06□□□□□ -1.92
SPG11-218ENST00000559754 SLC35G4P0C7Q5 338 aa3.06□□□□□ -1.92
SPG11-218ENST00000559754 POLR2MP0CAP2 368 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms