RNA–Protein interactions for RNA: ENST00000559309.5

SNRPA1-207, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-207ENST00000559309 RABL3Q5HYI8 236 aa13.65□□□□□ -0.22
SNRPA1-207ENST00000559309 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.65□□□□□ -0.22
SNRPA1-207ENST00000559309 ZNF468Q5VIY5 522 aaPredicted RBP13.65□□□□□ -0.22
SNRPA1-207ENST00000559309 AGAP7PQ5VUJ5 663 aa13.65□□□□□ -0.22
SNRPA1-207ENST00000559309 ISLR2Q6UXK2 745 aa13.65□□□□□ -0.22
SNRPA1-207ENST00000559309 BNC2Q6ZN30 1099 aaPredicted RBP13.65□□□□□ -0.22
SNRPA1-207ENST00000559309 ARPINQ7Z6K5 226 aa13.65□□□□□ -0.22
SNRPA1-207ENST00000559309 SERPINA11Q86U17 422 aa13.65□□□□□ -0.22
SNRPA1-207ENST00000559309 PTOV1Q86YD1 416 aa13.65□□□□□ -0.22
SNRPA1-207ENST00000559309 SLC44A2Q8IWA5 706 aaPredicted RBP13.65□□□□□ -0.22
SNRPA1-207ENST00000559309 GPALPP1Q8IXQ4 340 aa13.65□□□□□ -0.22
SNRPA1-207ENST00000559309 DND1Q8IYX4 353 aaKnown RBP13.65□□□□□ -0.22
SNRPA1-207ENST00000559309 SLC34A3Q8N130 599 aa13.65□□□□□ -0.22
SNRPA1-207ENST00000559309 RBM15BQ8NDT2 890 aaKnown RBP13.65□□□□□ -0.22
SNRPA1-207ENST00000559309 HGDQ93099 445 aa13.65□□□□□ -0.22
SNRPA1-207ENST00000559309 ZNF583Q96ND8 569 aa13.65□□□□□ -0.22
SNRPA1-207ENST00000559309 AGAP4Q96P64 663 aa13.65□□□□□ -0.22
SNRPA1-207ENST00000559309 BTBD2Q9BX70 525 aa13.65□□□□□ -0.22
SNRPA1-207ENST00000559309 RAD21L1Q9H4I0 556 aa13.65□□□□□ -0.22
SNRPA1-207ENST00000559309 LIN28AQ9H9Z2 209 aaKnown RBP13.65□□□□□ -0.22
SNRPA1-207ENST00000559309 ZBTB20Q9HC78 741 aaPredicted RBP13.65□□□□□ -0.22
SNRPA1-207ENST00000559309 EQTNQ9NQ60 294 aa13.65□□□□□ -0.22
SNRPA1-207ENST00000559309 WDR70Q9NW82 654 aa13.65□□□□□ -0.22
SNRPA1-207ENST00000559309 THUMPD1Q9NXG2 353 aaKnown RBP13.65□□□□□ -0.22
SNRPA1-207ENST00000559309 GPR83Q9NYM4 423 aa13.65□□□□□ -0.22
SNRPA1-207ENST00000559309 TAS2R1Q9NYW7 299 aa13.65□□□□□ -0.22
SNRPA1-207ENST00000559309 TMEM181Q9P2C4 612 aa13.65□□□□□ -0.22
SNRPA1-207ENST00000559309 CORO2BQ9UQ03 480 aa13.65□□□□□ -0.22
SNRPA1-207ENST00000559309 NPFFR2Q9Y5X5 522 aa13.65□□□□□ -0.22
SNRPA1-207ENST00000559309 ZNF462Q96JM2 2506 aa13.65□□□□□ -0.22
SNRPA1-207ENST00000559309 DSPPQ9NZW4 1301 aa13.64□□□□□ -0.23
SNRPA1-207ENST00000559309 OR6C70A6NIJ9 312 aa13.64□□□□□ -0.23
SNRPA1-207ENST00000559309 A8MVJ9 347 aa13.64□□□□□ -0.23
SNRPA1-207ENST00000559309 NME4O00746 187 aa13.64□□□□□ -0.23
SNRPA1-207ENST00000559309 PPM1BO75688 479 aa13.64□□□□□ -0.23
SNRPA1-207ENST00000559309 IL33O95760 270 aa13.64□□□□□ -0.23
SNRPA1-207ENST00000559309 AK1P00568 194 aa13.64□□□□□ -0.23
SNRPA1-207ENST00000559309 PDGFAP04085 211 aa13.64□□□□□ -0.23
SNRPA1-207ENST00000559309 ALOX5P09917 674 aa13.64□□□□□ -0.23
SNRPA1-207ENST00000559309 OR12D1P0DN82 309 aa13.64□□□□□ -0.23
SNRPA1-207ENST00000559309 ARAFP10398 606 aa13.64□□□□□ -0.23
SNRPA1-207ENST00000559309 ESRRAP11474 423 aaPredicted RBP13.64□□□□□ -0.23
SNRPA1-207ENST00000559309 ETFAP13804 333 aa13.64□□□□□ -0.23
SNRPA1-207ENST00000559309 LCN1P31025 176 aa13.64□□□□□ -0.23
SNRPA1-207ENST00000559309 CPA2P48052 419 aa13.64□□□□□ -0.23
SNRPA1-207ENST00000559309 NUDT2P50583 147 aa13.64□□□□□ -0.23
SNRPA1-207ENST00000559309 HLCSP50747 726 aa13.64□□□□□ -0.23
SNRPA1-207ENST00000559309 PNLIPRP2P54317 469 aa13.64□□□□□ -0.23
SNRPA1-207ENST00000559309 POLE2P56282 527 aa13.64□□□□□ -0.23
SNRPA1-207ENST00000559309 MTPNP58546 118 aa13.64□□□□□ -0.23
SNRPA1-207ENST00000559309 MRPS22P82650 360 aaKnown RBP13.64□□□□□ -0.23
SNRPA1-207ENST00000559309 ZNHIT3Q15649 155 aaPredicted RBP13.64□□□□□ -0.23
SNRPA1-207ENST00000559309 FCRLBQ6BAA4 426 aa13.64□□□□□ -0.23
SNRPA1-207ENST00000559309 PCSK4Q6UW60 755 aa13.64□□□□□ -0.23
SNRPA1-207ENST00000559309 PGAM4Q8N0Y7 254 aa13.64□□□□□ -0.23
SNRPA1-207ENST00000559309 TAGAPQ8N103 731 aa13.64□□□□□ -0.23
SNRPA1-207ENST00000559309 BEST3Q8N1M1 668 aa13.64□□□□□ -0.23
SNRPA1-207ENST00000559309 METTL25Q8N6Q8 603 aa13.64□□□□□ -0.23
SNRPA1-207ENST00000559309 BCORP1Q8N888 145 aa13.64□□□□□ -0.23
SNRPA1-207ENST00000559309 LSM14AQ8ND56 463 aaKnown RBP13.64□□□□□ -0.23
SNRPA1-207ENST00000559309 PNPT1Q8TCS8 783 aaKnown RBP13.64□□□□□ -0.23
SNRPA1-207ENST00000559309 ADAMTS15Q8TE58 950 aa13.64□□□□□ -0.23
SNRPA1-207ENST00000559309 THAP3Q8WTV1 239 aaPredicted RBP13.64□□□□□ -0.23
SNRPA1-207ENST00000559309 PIK3R3Q92569 461 aa13.64□□□□□ -0.23
SNRPA1-207ENST00000559309 DIO2Q92813 273 aa13.64□□□□□ -0.23
SNRPA1-207ENST00000559309 CDS1Q92903 461 aa13.64□□□□□ -0.23
SNRPA1-207ENST00000559309 EXTL1Q92935 676 aa13.64□□□□□ -0.23
SNRPA1-207ENST00000559309 GAL3ST4Q96RP7 486 aa13.64□□□□□ -0.23
SNRPA1-207ENST00000559309 SDF2Q99470 211 aa13.64□□□□□ -0.23
SNRPA1-207ENST00000559309 SH3GL1Q99961 368 aa13.64□□□□□ -0.23
SNRPA1-207ENST00000559309 YIPF4Q9BSR8 244 aa13.64□□□□□ -0.23
SNRPA1-207ENST00000559309 TRIM8Q9BZR9 551 aa13.64□□□□□ -0.23
SNRPA1-207ENST00000559309 ZNF350Q9GZX5 532 aa13.64□□□□□ -0.23
SNRPA1-207ENST00000559309 IL1RL2Q9HB29 575 aa13.64□□□□□ -0.23
SNRPA1-207ENST00000559309 Q9N2J8 555 aa13.64□□□□□ -0.23
SNRPA1-207ENST00000559309 A4GALTQ9NPC4 353 aa13.64□□□□□ -0.23
SNRPA1-207ENST00000559309 FBXO34Q9NWN3 711 aa13.64□□□□□ -0.23
SNRPA1-207ENST00000559309 STMN3Q9NZ72 180 aa13.64□□□□□ -0.23
SNRPA1-207ENST00000559309 TEKT2Q9UIF3 430 aa13.64□□□□□ -0.23
SNRPA1-207ENST00000559309 CBLCQ9ULV8 474 aa13.64□□□□□ -0.23
SNRPA1-207ENST00000559309 FAF1Q9UNN5 650 aaPredicted RBP13.64□□□□□ -0.23
SNRPA1-207ENST00000559309 A8MUI8 341 aa13.63□□□□□ -0.23
SNRPA1-207ENST00000559309 NEURL1O76050 574 aa13.63□□□□□ -0.23
SNRPA1-207ENST00000559309 OR6B1O95007 311 aa13.63□□□□□ -0.23
SNRPA1-207ENST00000559309 NGFRP08138 427 aa13.63□□□□□ -0.23
SNRPA1-207ENST00000559309 NUDT7P0C024 238 aa13.63□□□□□ -0.23
SNRPA1-207ENST00000559309 GABRA3P34903 492 aa13.63□□□□□ -0.23
SNRPA1-207ENST00000559309 SOX3P41225 446 aa13.63□□□□□ -0.23
SNRPA1-207ENST00000559309 SSR4P51571 173 aa13.63□□□□□ -0.23
SNRPA1-207ENST00000559309 PSME3P61289 254 aa13.63□□□□□ -0.23
SNRPA1-207ENST00000559309 RHDQ02161 417 aa13.63□□□□□ -0.23
SNRPA1-207ENST00000559309 TUBA3CQ13748 450 aa13.63□□□□□ -0.23
SNRPA1-207ENST00000559309 DCST2Q5T1A1 773 aa13.63□□□□□ -0.23
SNRPA1-207ENST00000559309 PRAMEF8Q5VWM4 474 aa13.63□□□□□ -0.23
SNRPA1-207ENST00000559309 PRAMEF7Q5VXH5 474 aa13.63□□□□□ -0.23
SNRPA1-207ENST00000559309 HLA-DQA1Q5Y7H0 255 aa13.63□□□□□ -0.23
SNRPA1-207ENST00000559309 TNFAIP8L2Q6P589 184 aaPredicted RBP13.63□□□□□ -0.23
SNRPA1-207ENST00000559309 TUBA3EQ6PEY2 450 aa13.63□□□□□ -0.23
SNRPA1-207ENST00000559309 OPN5Q6U736 354 aa13.63□□□□□ -0.23
SNRPA1-207ENST00000559309 RINLQ6ZS11 566 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms