RNA–Protein interactions for RNA: ENST00000559222.5

CASC4-209, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-209ENST00000559222 ZNF407Q9C0G0 2248 aa17.14■□□□□ 0.33
CASC4-209ENST00000559222 HIVEP3Q5T1R4 2406 aa17.13■□□□□ 0.33
CASC4-209ENST00000559222 CAPN14A8MX76 684 aa17.13■□□□□ 0.33
CASC4-209ENST00000559222 TP53I11O14683 189 aa17.13■□□□□ 0.33
CASC4-209ENST00000559222 CFLARO15519 480 aa17.13■□□□□ 0.33
CASC4-209ENST00000559222 ASNA1O43681 348 aa17.13■□□□□ 0.33
CASC4-209ENST00000559222 CDC40O60508 579 aaKnown RBP eCLIP17.13■□□□□ 0.33
CASC4-209ENST00000559222 EDF1O60869 148 aaKnown RBP17.13■□□□□ 0.33
CASC4-209ENST00000559222 NKX2-2O95096 273 aa17.13■□□□□ 0.33
CASC4-209ENST00000559222 HMGN2P05204 90 aaKnown RBP17.13■□□□□ 0.33
CASC4-209ENST00000559222 NAGAP17050 411 aa17.13■□□□□ 0.33
CASC4-209ENST00000559222 KIR3DL1P43629 444 aa17.13■□□□□ 0.33
CASC4-209ENST00000559222 RFX3P48380 749 aa17.13■□□□□ 0.33
CASC4-209ENST00000559222 CCT3P49368 545 aaKnown RBP17.13■□□□□ 0.33
CASC4-209ENST00000559222 RPS26P62854 115 aaKnown RBP17.13■□□□□ 0.33
CASC4-209ENST00000559222 TP53BP2Q13625 1128 aa17.13■□□□□ 0.33
CASC4-209ENST00000559222 LASP1Q14847 261 aaKnown RBP17.13■□□□□ 0.33
CASC4-209ENST00000559222 PDCD4Q53EL6 469 aaKnown RBP17.13■□□□□ 0.33
CASC4-209ENST00000559222 NUP54Q7Z3B4 507 aa17.13■□□□□ 0.33
CASC4-209ENST00000559222 OR4A15Q8NGL6 344 aa17.13■□□□□ 0.33
CASC4-209ENST00000559222 CEP70Q8NHQ1 597 aa17.13■□□□□ 0.33
CASC4-209ENST00000559222 SLC9A6Q92581 669 aa17.13■□□□□ 0.33
CASC4-209ENST00000559222 RMND5BQ96G75 393 aaPredicted RBP17.13■□□□□ 0.33
CASC4-209ENST00000559222 INPP5KQ9BT40 448 aa17.13■□□□□ 0.33
CASC4-209ENST00000559222 RTN4RQ9BZR6 473 aa17.13■□□□□ 0.33
CASC4-209ENST00000559222 ZNF703Q9H7S9 590 aaPredicted RBP17.13■□□□□ 0.33
CASC4-209ENST00000559222 ZDHHC11Q9H8X9 412 aa17.13■□□□□ 0.33
CASC4-209ENST00000559222 IL1RL2Q9HB29 575 aa17.13■□□□□ 0.33
CASC4-209ENST00000559222 C3orf14Q9HBI5 128 aa17.13■□□□□ 0.33
CASC4-209ENST00000559222 GPATCH2Q9NW75 528 aa17.13■□□□□ 0.33
CASC4-209ENST00000559222 FBXO34Q9NWN3 711 aa17.13■□□□□ 0.33
CASC4-209ENST00000559222 CBLCQ9ULV8 474 aa17.13■□□□□ 0.33
CASC4-209ENST00000559222 KCNE3Q9Y6H6 103 aa17.13■□□□□ 0.33
CASC4-209ENST00000559222 FLNCQ14315 2725 aa17.12■□□□□ 0.33
CASC4-209ENST00000559222 PRAMEF25A6NGN4 478 aa17.12■□□□□ 0.33
CASC4-209ENST00000559222 OR6C70A6NIJ9 312 aa17.12■□□□□ 0.33
CASC4-209ENST00000559222 RNASET2O00584 256 aaKnown RBP17.12■□□□□ 0.33
CASC4-209ENST00000559222 GNB5O14775 395 aa17.12■□□□□ 0.33
CASC4-209ENST00000559222 UBDO15205 165 aa17.12■□□□□ 0.33
CASC4-209ENST00000559222 ICOSLGO75144 302 aa17.12■□□□□ 0.33
CASC4-209ENST00000559222 CPSF4O95639 269 aaKnown RBP17.12■□□□□ 0.33
CASC4-209ENST00000559222 IL12BP29460 328 aa17.12■□□□□ 0.33
CASC4-209ENST00000559222 CDKN2CP42773 168 aa17.12■□□□□ 0.33
CASC4-209ENST00000559222 CLNS1AP54105 237 aaKnown RBP17.12■□□□□ 0.33
CASC4-209ENST00000559222 CASP9P55211 416 aa17.12■□□□□ 0.33
CASC4-209ENST00000559222 GUCY1A3Q02108 690 aa17.12■□□□□ 0.33
CASC4-209ENST00000559222 SF3A3Q12874 501 aaKnown RBP eCLIP17.12■□□□□ 0.33
CASC4-209ENST00000559222 ELOAQ14241 798 aaKnown RBP17.12■□□□□ 0.33
CASC4-209ENST00000559222 SPDYE7PQ495Y7 208 aa17.12■□□□□ 0.33
CASC4-209ENST00000559222 CCNJQ5T5M9 372 aa17.12■□□□□ 0.33
CASC4-209ENST00000559222 C1QL3Q5VWW1 255 aa17.12■□□□□ 0.33
CASC4-209ENST00000559222 CGB2Q6NT52 195 aa17.12■□□□□ 0.33
CASC4-209ENST00000559222 PAOXQ6QHF9 649 aa17.12■□□□□ 0.33
CASC4-209ENST00000559222 SPPL2CQ8IUH8 684 aa17.12■□□□□ 0.33
CASC4-209ENST00000559222 GPR151Q8TDV0 419 aa17.12■□□□□ 0.33
CASC4-209ENST00000559222 RNF138Q8WVD3 245 aa17.12■□□□□ 0.33
CASC4-209ENST00000559222 OSBPL11Q9BXB4 747 aa17.12■□□□□ 0.33
CASC4-209ENST00000559222 METTL7AQ9H8H3 244 aa17.12■□□□□ 0.33
CASC4-209ENST00000559222 TCF7L2Q9NQB0 619 aa17.12■□□□□ 0.33
CASC4-209ENST00000559222 SH3BGRL2Q9UJC5 107 aa17.12■□□□□ 0.33
CASC4-209ENST00000559222 PCNX3Q9H6A9 2034 aa17.11■□□□□ 0.33
CASC4-209ENST00000559222 GTF3C1Q12789 2109 aa17.11■□□□□ 0.33
CASC4-209ENST00000559222 ANKRD33BA6NCL7 494 aa17.11■□□□□ 0.33
CASC4-209ENST00000559222 IDO1P14902 403 aa17.11■□□□□ 0.33
CASC4-209ENST00000559222 DDX5P17844 614 aaKnown RBP17.11■□□□□ 0.33
CASC4-209ENST00000559222 S100A3P33764 101 aa17.11■□□□□ 0.33
CASC4-209ENST00000559222 MRPS22P82650 360 aaKnown RBP17.11■□□□□ 0.33
CASC4-209ENST00000559222 PRR5P85299 388 aa17.11■□□□□ 0.33
CASC4-209ENST00000559222 FIGNL1Q6PIW4 674 aa17.11■□□□□ 0.33
CASC4-209ENST00000559222 ACAD11Q709F0 780 aa17.11■□□□□ 0.33
CASC4-209ENST00000559222 CDRT4Q8N9R6 151 aa17.11■□□□□ 0.33
CASC4-209ENST00000559222 SFXN5Q8TD22 340 aa17.11■□□□□ 0.33
CASC4-209ENST00000559222 JADE3Q92613 823 aa17.11■□□□□ 0.33
CASC4-209ENST00000559222 CDS1Q92903 461 aa17.11■□□□□ 0.33
CASC4-209ENST00000559222 ZNF597Q96LX8 424 aa17.11■□□□□ 0.33
CASC4-209ENST00000559222 SECISBP2Q96T21 854 aaKnown RBP17.11■□□□□ 0.33
CASC4-209ENST00000559222 Q9N2J8 555 aa17.11■□□□□ 0.33
CASC4-209ENST00000559222 NPHS2Q9NP85 383 aa17.11■□□□□ 0.33
CASC4-209ENST00000559222 ZFP64Q9NPA5 681 aa17.11■□□□□ 0.33
CASC4-209ENST00000559222 SDR39U1Q9NRG7 319 aaPredicted RBP17.11■□□□□ 0.33
CASC4-209ENST00000559222 TNFRSF10DQ9UBN6 386 aa17.11■□□□□ 0.33
CASC4-209ENST00000559222 ERRFI1Q9UJM3 462 aaPredicted RBP17.11■□□□□ 0.33
CASC4-209ENST00000559222 MAPRE3Q9UPY8 281 aa17.11■□□□□ 0.33
CASC4-209ENST00000559222 RNF103-CHMP3A0A140T963 221 aa17.1■□□□□ 0.33
CASC4-209ENST00000559222 A0A1B0GTH9 108 aa17.1■□□□□ 0.33
CASC4-209ENST00000559222 ACOT7O00154 380 aa17.1■□□□□ 0.33
CASC4-209ENST00000559222 POLR3GO15318 223 aaPredicted RBP17.1■□□□□ 0.33
CASC4-209ENST00000559222 TGDSO95455 350 aa17.1■□□□□ 0.33
CASC4-209ENST00000559222 IL33O95760 270 aa17.1■□□□□ 0.33
CASC4-209ENST00000559222 ENDOUP21128 410 aaKnown RBP17.1■□□□□ 0.33
CASC4-209ENST00000559222 MAN2A2P49641 1150 aa17.1■□□□□ 0.33
CASC4-209ENST00000559222 PNLIPRP2P54317 469 aa17.1■□□□□ 0.33
CASC4-209ENST00000559222 GAS1P54826 345 aa17.1■□□□□ 0.33
CASC4-209ENST00000559222 ZNHIT3Q15649 155 aaPredicted RBP17.1■□□□□ 0.33
CASC4-209ENST00000559222 C3AR1Q16581 482 aa17.1■□□□□ 0.33
CASC4-209ENST00000559222 HYAL4Q2M3T9 481 aa17.1■□□□□ 0.33
CASC4-209ENST00000559222 CYP27C1Q4G0S4 372 aa17.1■□□□□ 0.33
CASC4-209ENST00000559222 HSP90B2PQ58FF3 399 aa17.1■□□□□ 0.33
CASC4-209ENST00000559222 ANGPTL8Q6UXH0 198 aa17.1■□□□□ 0.33
CASC4-209ENST00000559222 NCCRP1Q6ZVX7 275 aaPredicted RBP17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms