RNA–Protein interactions for RNA: ENST00000559100.1

GABPB1-209, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-209ENST00000559100 BTNL3Q6UXE8 466 aa1.95□□□□□ -2.1
GABPB1-209ENST00000559100 FRRS1Q6ZNA5 592 aa1.95□□□□□ -2.1
GABPB1-209ENST00000559100 LANCL3Q6ZV70 420 aa1.95□□□□□ -2.1
GABPB1-209ENST00000559100 MOB2Q70IA6 237 aa1.95□□□□□ -2.1
GABPB1-209ENST00000559100 CCDC80Q76M96 950 aa1.95□□□□□ -2.1
GABPB1-209ENST00000559100 SMIM29Q86T20 159 aa1.95□□□□□ -2.1
GABPB1-209ENST00000559100 APLFQ8IW19 511 aaPredicted RBP1.95□□□□□ -2.1
GABPB1-209ENST00000559100 SLC38A6Q8IZM9 456 aa1.95□□□□□ -2.1
GABPB1-209ENST00000559100 UBE2J2Q8N2K1 259 aa1.95□□□□□ -2.1
GABPB1-209ENST00000559100 ZNF781Q8N8C0 355 aa1.95□□□□□ -2.1
GABPB1-209ENST00000559100 NFAM1Q8NET5 270 aaPredicted RBP1.95□□□□□ -2.1
GABPB1-209ENST00000559100 OR5AU1Q8NGC0 362 aa1.95□□□□□ -2.1
GABPB1-209ENST00000559100 AKR7LQ8NHP1 331 aa1.95□□□□□ -2.1
GABPB1-209ENST00000559100 LRRC15Q8TF66 581 aa1.95□□□□□ -2.1
GABPB1-209ENST00000559100 SPRYD4Q8WW59 207 aaPredicted RBP1.95□□□□□ -2.1
GABPB1-209ENST00000559100 RPL3LQ92901 407 aaKnown RBP1.95□□□□□ -2.1
GABPB1-209ENST00000559100 SLCO2A1Q92959 643 aa1.95□□□□□ -2.1
GABPB1-209ENST00000559100 BIRC7Q96CA5 298 aa1.95□□□□□ -2.1
GABPB1-209ENST00000559100 CAPNS2Q96L46 248 aa1.95□□□□□ -2.1
GABPB1-209ENST00000559100 PSKH2Q96QS6 385 aa1.95□□□□□ -2.1
GABPB1-209ENST00000559100 ZNF300Q96RE9 604 aaPredicted RBP1.95□□□□□ -2.1
GABPB1-209ENST00000559100 F2RL3Q96RI0 385 aa1.95□□□□□ -2.1
GABPB1-209ENST00000559100 RIT2Q99578 217 aa1.95□□□□□ -2.1
GABPB1-209ENST00000559100 NPAS2Q99743 824 aa1.95□□□□□ -2.1
GABPB1-209ENST00000559100 OVOL2Q9BRP0 275 aa1.95□□□□□ -2.1
GABPB1-209ENST00000559100 GPR174Q9BXC1 333 aa1.95□□□□□ -2.1
GABPB1-209ENST00000559100 NXF5Q9H1B4 397 aaKnown RBP1.95□□□□□ -2.1
GABPB1-209ENST00000559100 UPF3AQ9H1J1 476 aaKnown RBP1.95□□□□□ -2.1
GABPB1-209ENST00000559100 MOB1AQ9H8S9 216 aa1.95□□□□□ -2.1
GABPB1-209ENST00000559100 MEAF6Q9HAF1 191 aa1.95□□□□□ -2.1
GABPB1-209ENST00000559100 ZNF556Q9HAH1 456 aa1.95□□□□□ -2.1
GABPB1-209ENST00000559100 ADGRL4Q9HBW9 690 aa1.95□□□□□ -2.1
GABPB1-209ENST00000559100 DEPPQ9NTK1 212 aa1.95□□□□□ -2.1
GABPB1-209ENST00000559100 GNG12Q9UBI6 72 aa1.95□□□□□ -2.1
GABPB1-209ENST00000559100 KCNG2Q9UJ96 466 aa1.95□□□□□ -2.1
GABPB1-209ENST00000559100 PURGQ9UJV8 347 aaKnown RBP1.95□□□□□ -2.1
GABPB1-209ENST00000559100 RNF6Q9Y252 685 aa1.95□□□□□ -2.1
GABPB1-209ENST00000559100 MRPS18CQ9Y3D5 142 aaKnown RBP1.95□□□□□ -2.1
GABPB1-209ENST00000559100 MAB21L2Q9Y586 359 aa1.95□□□□□ -2.1
GABPB1-209ENST00000559100 SYNJ2O15056 1496 aa1.94□□□□□ -2.1
GABPB1-209ENST00000559100 DOCK7Q96N67 2140 aa1.94□□□□□ -2.1
GABPB1-209ENST00000559100 KIAA1210Q9ULL0 1709 aa1.94□□□□□ -2.1
GABPB1-209ENST00000559100 A0A0A6YYD4 124 aa1.94□□□□□ -2.1
GABPB1-209ENST00000559100 TEX48A0A1B0GUV7 120 aa1.94□□□□□ -2.1
GABPB1-209ENST00000559100 MFSD2BA6NFX1 497 aa1.94□□□□□ -2.1
GABPB1-209ENST00000559100 FBLL1A6NHQ2 334 aaKnown RBP1.94□□□□□ -2.1
GABPB1-209ENST00000559100 ZSCAN5BA6NJL1 495 aa1.94□□□□□ -2.1
GABPB1-209ENST00000559100 TRAFD1O14545 582 aaPredicted RBP1.94□□□□□ -2.1
GABPB1-209ENST00000559100 ARPC3O15145 178 aa1.94□□□□□ -2.1
GABPB1-209ENST00000559100 CTAGE5O15320 804 aa1.94□□□□□ -2.1
GABPB1-209ENST00000559100 STX7O15400 261 aaKnown RBP1.94□□□□□ -2.1
GABPB1-209ENST00000559100 ZSCAN12O43309 604 aa1.94□□□□□ -2.1
GABPB1-209ENST00000559100 ERLIN1O75477 346 aa1.94□□□□□ -2.1
GABPB1-209ENST00000559100 KRTAP5-8O75690 187 aa1.94□□□□□ -2.1
GABPB1-209ENST00000559100 NEBLO76041 1014 aa1.94□□□□□ -2.1
GABPB1-209ENST00000559100 ZNF432O94892 652 aa1.94□□□□□ -2.1
GABPB1-209ENST00000559100 DUS4LO95620 317 aaKnown RBP1.94□□□□□ -2.1
GABPB1-209ENST00000559100 OAS1P00973 400 aaKnown RBP1.94□□□□□ -2.1
GABPB1-209ENST00000559100 CHRNA1P02708 482 aa1.94□□□□□ -2.1
GABPB1-209ENST00000559100 ALOX5P09917 674 aa1.94□□□□□ -2.1
GABPB1-209ENST00000559100 DBTP11182 482 aaKnown RBP1.94□□□□□ -2.1
GABPB1-209ENST00000559100 ACADSP16219 412 aa1.94□□□□□ -2.1
GABPB1-209ENST00000559100 CCKARP32238 428 aa1.94□□□□□ -2.1
GABPB1-209ENST00000559100 SPRP35270 261 aaPredicted RBP1.94□□□□□ -2.1
GABPB1-209ENST00000559100 SAA4P35542 130 aa1.94□□□□□ -2.1
GABPB1-209ENST00000559100 TIMP3P35625 211 aa1.94□□□□□ -2.1
GABPB1-209ENST00000559100 TAGLN2P37802 199 aaKnown RBP1.94□□□□□ -2.1
GABPB1-209ENST00000559100 PTGER3P43115 390 aa1.94□□□□□ -2.1
GABPB1-209ENST00000559100 CEBPDP49716 269 aaPredicted RBP1.94□□□□□ -2.1
GABPB1-209ENST00000559100 EMDP50402 254 aa1.94□□□□□ -2.1
GABPB1-209ENST00000559100 PPT1P50897 306 aa1.94□□□□□ -2.1
GABPB1-209ENST00000559100 NOVA1P51513 510 aaKnown RBP1.94□□□□□ -2.1
GABPB1-209ENST00000559100 RIDAP52758 137 aaKnown RBP1.94□□□□□ -2.1
GABPB1-209ENST00000559100 HAND2P61296 217 aa1.94□□□□□ -2.1
GABPB1-209ENST00000559100 SRPXP78539 464 aa1.94□□□□□ -2.1
GABPB1-209ENST00000559100 OTUD4Q01804 1114 aaKnown RBP1.94□□□□□ -2.1
GABPB1-209ENST00000559100 BDH1Q02338 343 aa1.94□□□□□ -2.1
GABPB1-209ENST00000559100 RGS1Q08116 209 aa1.94□□□□□ -2.1
GABPB1-209ENST00000559100 HYAL1Q12794 435 aa1.94□□□□□ -2.1
GABPB1-209ENST00000559100 EXOC3L2Q2M3D2 409 aa1.94□□□□□ -2.1
GABPB1-209ENST00000559100 MS4A18Q3C1V0 323 aa1.94□□□□□ -2.1
GABPB1-209ENST00000559100 MOGAT2Q3SYC2 334 aa1.94□□□□□ -2.1
GABPB1-209ENST00000559100 ZFP69Q49AA0 526 aa1.94□□□□□ -2.1
GABPB1-209ENST00000559100 LINC01620Q4KN68 170 aa1.94□□□□□ -2.1
GABPB1-209ENST00000559100 ACER2Q5QJU3 275 aa1.94□□□□□ -2.1
GABPB1-209ENST00000559100 PHYHD1Q5SRE7 291 aa1.94□□□□□ -2.1
GABPB1-209ENST00000559100 ADAMTSL4-AS1Q5T5F5 129 aa1.94□□□□□ -2.1
GABPB1-209ENST00000559100 LEG1Q6P5S2 330 aa1.94□□□□□ -2.1
GABPB1-209ENST00000559100 ZYG11AQ6WRX3 759 aa1.94□□□□□ -2.1
GABPB1-209ENST00000559100 HACD2Q6Y1H2 254 aa1.94□□□□□ -2.1
GABPB1-209ENST00000559100 C3P1Q6ZMU1 363 aa1.94□□□□□ -2.1
GABPB1-209ENST00000559100 Q6ZRP5 223 aa1.94□□□□□ -2.1
GABPB1-209ENST00000559100 NUFIP2Q7Z417 695 aaKnown RBP1.94□□□□□ -2.1
GABPB1-209ENST00000559100 PARGQ86W56 976 aa1.94□□□□□ -2.1
GABPB1-209ENST00000559100 CATSPER3Q86XQ3 398 aa1.94□□□□□ -2.1
GABPB1-209ENST00000559100 SLC22A9Q8IVM8 553 aa1.94□□□□□ -2.1
GABPB1-209ENST00000559100 ZNF683Q8IZ20 524 aa1.94□□□□□ -2.1
GABPB1-209ENST00000559100 TMEM123Q8N131 208 aa1.94□□□□□ -2.1
GABPB1-209ENST00000559100 LRRC43Q8N309 656 aa1.94□□□□□ -2.1
GABPB1-209ENST00000559100 ANKFN1Q8N957 763 aa1.94□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms