RNA–Protein interactions for RNA: ENST00000558988.5

SPG11-213, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 3

Gene SPG11, Length 620 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-213ENST00000558988 KRT15P19012 456 aa6.72□□□□□ -1.33
SPG11-213ENST00000558988 TCEA1P23193 301 aaKnown RBP6.72□□□□□ -1.33
SPG11-213ENST00000558988 SERPINB3P29508 390 aa6.72□□□□□ -1.33
SPG11-213ENST00000558988 BSGP35613 385 aa6.72□□□□□ -1.33
SPG11-213ENST00000558988 DEKP35659 375 aaKnown RBP6.72□□□□□ -1.33
SPG11-213ENST00000558988 MASP1P48740 699 aa6.72□□□□□ -1.33
SPG11-213ENST00000558988 MAPK12P53778 367 aa6.72□□□□□ -1.33
SPG11-213ENST00000558988 CDH13P55290 713 aa6.72□□□□□ -1.33
SPG11-213ENST00000558988 FBXW4P57775 412 aa6.72□□□□□ -1.33
SPG11-213ENST00000558988 KRTAP10-6P60371 365 aaPredicted RBP6.72□□□□□ -1.33
SPG11-213ENST00000558988 IGLV3-21P80748 117 aaPredicted RBP6.72□□□□□ -1.33
SPG11-213ENST00000558988 IFT88Q13099 833 aa6.72□□□□□ -1.33
SPG11-213ENST00000558988 PCBP2Q15366 365 aaKnown RBP eCLIP6.72□□□□□ -1.33
SPG11-213ENST00000558988 MPEG1Q2M385 716 aa6.72□□□□□ -1.33
SPG11-213ENST00000558988 ZNF791Q3KP31 576 aaPredicted RBP6.72□□□□□ -1.33
SPG11-213ENST00000558988 CCNYL2Q5T2Q4 361 aa6.72□□□□□ -1.33
SPG11-213ENST00000558988 FRG2Q64ET8 278 aa6.72□□□□□ -1.33
SPG11-213ENST00000558988 B3GNT6Q6ZMB0 384 aa6.72□□□□□ -1.33
SPG11-213ENST00000558988 RGS9BPQ6ZS82 235 aa6.72□□□□□ -1.33
SPG11-213ENST00000558988 TRILQ7L0X0 811 aa6.72□□□□□ -1.33
SPG11-213ENST00000558988 CCDC91Q7Z6B0 441 aa6.72□□□□□ -1.33
SPG11-213ENST00000558988 ST13P4Q8IZP2 240 aaPredicted RBP6.72□□□□□ -1.33
SPG11-213ENST00000558988 MMP21Q8N119 569 aa6.72□□□□□ -1.33
SPG11-213ENST00000558988 ZCCHC7Q8N3Z6 543 aaKnown RBP6.72□□□□□ -1.33
SPG11-213ENST00000558988 NOA1Q8NC60 698 aaKnown RBP6.72□□□□□ -1.33
SPG11-213ENST00000558988 OR4F6Q8NGB9 312 aa6.72□□□□□ -1.33
SPG11-213ENST00000558988 OR8K3Q8NH51 312 aa6.72□□□□□ -1.33
SPG11-213ENST00000558988 NUBPLQ8TB37 319 aa6.72□□□□□ -1.33
SPG11-213ENST00000558988 PPP1R14AQ96A00 147 aa6.72□□□□□ -1.33
SPG11-213ENST00000558988 SARAFQ96BY9 339 aa6.72□□□□□ -1.33
SPG11-213ENST00000558988 GPR78Q96P69 363 aa6.72□□□□□ -1.33
SPG11-213ENST00000558988 FRG2BQ96QU4 278 aa6.72□□□□□ -1.33
SPG11-213ENST00000558988 FMO2Q99518 471 aa6.72□□□□□ -1.33
SPG11-213ENST00000558988 SERPINI1Q99574 410 aa6.72□□□□□ -1.33
SPG11-213ENST00000558988 ZNF559Q9BR84 538 aa6.72□□□□□ -1.33
SPG11-213ENST00000558988 PELOQ9BRX2 385 aaKnown RBP6.72□□□□□ -1.33
SPG11-213ENST00000558988 TTYH2Q9BSA4 534 aa6.72□□□□□ -1.33
SPG11-213ENST00000558988 ZNF717Q9BY31 904 aaPredicted RBP6.72□□□□□ -1.33
SPG11-213ENST00000558988 WWTR1Q9GZV5 400 aa6.72□□□□□ -1.33
SPG11-213ENST00000558988 DDX31Q9H8H2 851 aaKnown RBP6.72□□□□□ -1.33
SPG11-213ENST00000558988 ZDHHC11Q9H8X9 412 aa6.72□□□□□ -1.33
SPG11-213ENST00000558988 SPRR3Q9UBC9 169 aa6.72□□□□□ -1.33
SPG11-213ENST00000558988 B4GALT7Q9UBV7 327 aa6.72□□□□□ -1.33
SPG11-213ENST00000558988 BCAP29Q9UHQ4 241 aa6.72□□□□□ -1.33
SPG11-213ENST00000558988 PCTPQ9UKL6 214 aa6.72□□□□□ -1.33
SPG11-213ENST00000558988 ASB4Q9Y574 426 aa6.72□□□□□ -1.33
SPG11-213ENST00000558988 ABCA12Q86UK0 2595 aa6.72□□□□□ -1.33
SPG11-213ENST00000558988 ITPR2Q14571 2701 aa6.72□□□□□ -1.33
SPG11-213ENST00000558988 SPENQ96T58 3664 aaKnown RBP6.72□□□□□ -1.33
SPG11-213ENST00000558988 NCKAP5O14513 1909 aa6.72□□□□□ -1.33
SPG11-213ENST00000558988 CENPEQ02224 2701 aa6.71□□□□□ -1.33
SPG11-213ENST00000558988 EXOC1LA0A1B0GW35 172 aa6.71□□□□□ -1.34
SPG11-213ENST00000558988 LRRC3CA6NJW4 275 aa6.71□□□□□ -1.34
SPG11-213ENST00000558988 B2RBV5 119 aa6.71□□□□□ -1.34
SPG11-213ENST00000558988 GOLGA8RI6L899 631 aa6.71□□□□□ -1.34
SPG11-213ENST00000558988 PPP6CO00743 305 aa6.71□□□□□ -1.34
SPG11-213ENST00000558988 TP53I11O14683 189 aa6.71□□□□□ -1.34
SPG11-213ENST00000558988 KLK8O60259 260 aa6.71□□□□□ -1.34
SPG11-213ENST00000558988 UGDHO60701 494 aa6.71□□□□□ -1.34
SPG11-213ENST00000558988 KRT38O76015 456 aa6.71□□□□□ -1.34
SPG11-213ENST00000558988 TOXO94900 526 aa6.71□□□□□ -1.34
SPG11-213ENST00000558988 GLSO94925 669 aaPredicted RBP6.71□□□□□ -1.34
SPG11-213ENST00000558988 RBP1P09455 135 aa6.71□□□□□ -1.34
SPG11-213ENST00000558988 FEN1P39748 380 aaKnown RBP6.71□□□□□ -1.34
SPG11-213ENST00000558988 XKP51811 444 aa6.71□□□□□ -1.34
SPG11-213ENST00000558988 SLC37A1P57057 533 aa6.71□□□□□ -1.34
SPG11-213ENST00000558988 FOXO1Q12778 655 aa6.71□□□□□ -1.34
SPG11-213ENST00000558988 TRAF3Q13114 568 aa6.71□□□□□ -1.34
SPG11-213ENST00000558988 CUL3Q13618 768 aa6.71□□□□□ -1.34
SPG11-213ENST00000558988 E2F2Q14209 437 aa6.71□□□□□ -1.34
SPG11-213ENST00000558988 EXOSC7Q15024 291 aaKnown RBP6.71□□□□□ -1.34
SPG11-213ENST00000558988 EBPQ15125 230 aaKnown RBP6.71□□□□□ -1.34
SPG11-213ENST00000558988 WHAMMP3Q1A5X7 153 aa6.71□□□□□ -1.34
SPG11-213ENST00000558988 TCHHL1Q5QJ38 904 aaPredicted RBP6.71□□□□□ -1.34
SPG11-213ENST00000558988 ZNF362Q5T0B9 420 aaPredicted RBP6.71□□□□□ -1.34
SPG11-213ENST00000558988 C1orf185Q5T7R7 199 aa6.71□□□□□ -1.34
SPG11-213ENST00000558988 TMEM198Q66K66 360 aa6.71□□□□□ -1.34
SPG11-213ENST00000558988 MRM1Q6IN84 353 aaKnown RBP6.71□□□□□ -1.34
SPG11-213ENST00000558988 FAM111BQ6SJ93 734 aa6.71□□□□□ -1.34
SPG11-213ENST00000558988 ZNF572Q7Z3I7 529 aaPredicted RBP6.71□□□□□ -1.34
SPG11-213ENST00000558988 COMMD6Q7Z4G1 85 aa6.71□□□□□ -1.34
SPG11-213ENST00000558988 TAGAPQ8N103 731 aa6.71□□□□□ -1.34
SPG11-213ENST00000558988 FBXW8Q8N3Y1 598 aa6.71□□□□□ -1.34
SPG11-213ENST00000558988 L3MBTL4Q8NA19 623 aa6.71□□□□□ -1.34
SPG11-213ENST00000558988 OR4K14Q8NGD5 310 aa6.71□□□□□ -1.34
SPG11-213ENST00000558988 LILRB4Q8NHJ6 448 aa6.71□□□□□ -1.34
SPG11-213ENST00000558988 CDC26Q8NHZ8 85 aa6.71□□□□□ -1.34
SPG11-213ENST00000558988 WDR20Q8TBZ3 569 aa6.71□□□□□ -1.34
SPG11-213ENST00000558988 RDH11Q8TC12 318 aa6.71□□□□□ -1.34
SPG11-213ENST00000558988 TRPC4APQ8TEL6 797 aa6.71□□□□□ -1.34
SPG11-213ENST00000558988 SLC44A1Q8WWI5 657 aa6.71□□□□□ -1.34
SPG11-213ENST00000558988 SELENOMQ8WWX9 145 aa6.71□□□□□ -1.34
SPG11-213ENST00000558988 NRGNQ92686 78 aa6.71□□□□□ -1.34
SPG11-213ENST00000558988 KLHL29Q96CT2 875 aa6.71□□□□□ -1.34
SPG11-213ENST00000558988 ZNF597Q96LX8 424 aa6.71□□□□□ -1.34
SPG11-213ENST00000558988 MCCC2Q9HCC0 563 aa6.71□□□□□ -1.34
SPG11-213ENST00000558988 ZBTB26Q9HCK0 441 aa6.71□□□□□ -1.34
SPG11-213ENST00000558988 EHD3Q9NZN3 535 aa6.71□□□□□ -1.34
SPG11-213ENST00000558988 FAM215AQ9Y5M1 114 aa6.71□□□□□ -1.34
SPG11-213ENST00000558988 CHCHD2Q9Y6H1 151 aaPredicted RBP6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms