RNA–Protein interactions for RNA: ENST00000558966.5

CTDSPL2-204, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-204ENST00000558966 MRPS35P82673 323 aaKnown RBP5.54□□□□□ -1.52
CTDSPL2-204ENST00000558966 TEKQ02763 1124 aa5.54□□□□□ -1.52
CTDSPL2-204ENST00000558966 ZNF763Q0D2J5 394 aa5.54□□□□□ -1.52
CTDSPL2-204ENST00000558966 FOXO1Q12778 655 aa5.54□□□□□ -1.52
CTDSPL2-204ENST00000558966 KIAA0040Q15053 153 aa5.54□□□□□ -1.52
CTDSPL2-204ENST00000558966 CEBPEQ15744 281 aa5.54□□□□□ -1.52
CTDSPL2-204ENST00000558966 C3AR1Q16581 482 aa5.54□□□□□ -1.52
CTDSPL2-204ENST00000558966 TRMT12Q53H54 448 aaKnown RBP5.54□□□□□ -1.52
CTDSPL2-204ENST00000558966 KRTCAP3Q53RY4 240 aa5.54□□□□□ -1.52
CTDSPL2-204ENST00000558966 ZNF628Q5EBL2 1059 aa5.54□□□□□ -1.52
CTDSPL2-204ENST00000558966 TNFAIP8L3Q5GJ75 292 aa5.54□□□□□ -1.52
CTDSPL2-204ENST00000558966 ARL13AQ5H913 290 aaPredicted RBP5.54□□□□□ -1.52
CTDSPL2-204ENST00000558966 CES4AQ5XG92 561 aa5.54□□□□□ -1.52
CTDSPL2-204ENST00000558966 HIST2H2BCQ6DN03 193 aa5.54□□□□□ -1.52
CTDSPL2-204ENST00000558966 FAM71E1Q6IPT2 247 aa5.54□□□□□ -1.52
CTDSPL2-204ENST00000558966 NOXRED1Q6NXP6 359 aa5.54□□□□□ -1.52
CTDSPL2-204ENST00000558966 TMEM64Q6YI46 380 aa5.54□□□□□ -1.52
CTDSPL2-204ENST00000558966 Q6ZPB1 254 aaPredicted RBP5.54□□□□□ -1.52
CTDSPL2-204ENST00000558966 RNF165Q6ZSG1 346 aa5.54□□□□□ -1.52
CTDSPL2-204ENST00000558966 Q6ZSR9 355 aa5.54□□□□□ -1.52
CTDSPL2-204ENST00000558966 LHFPL2Q6ZUX7 228 aa5.54□□□□□ -1.52
CTDSPL2-204ENST00000558966 FJX1Q86VR8 437 aa5.54□□□□□ -1.52
CTDSPL2-204ENST00000558966 GHDCQ8N2G8 530 aa5.54□□□□□ -1.52
CTDSPL2-204ENST00000558966 LRRC25Q8N386 305 aaPredicted RBP5.54□□□□□ -1.52
CTDSPL2-204ENST00000558966 SLC15A4Q8N697 577 aa5.54□□□□□ -1.52
CTDSPL2-204ENST00000558966 OR7G1Q8NGA0 311 aa5.54□□□□□ -1.52
CTDSPL2-204ENST00000558966 PAQR8Q8TEZ7 354 aa5.54□□□□□ -1.52
CTDSPL2-204ENST00000558966 RELTQ969Z4 430 aa5.54□□□□□ -1.52
CTDSPL2-204ENST00000558966 EXOSC8Q96B26 276 aaKnown RBP5.54□□□□□ -1.52
CTDSPL2-204ENST00000558966 ZBTB9Q96C00 473 aa5.54□□□□□ -1.52
CTDSPL2-204ENST00000558966 SGCZQ96LD1 299 aa5.54□□□□□ -1.52
CTDSPL2-204ENST00000558966 ZIM3Q96PE6 472 aa5.54□□□□□ -1.52
CTDSPL2-204ENST00000558966 FAM173AQ9BQD7 235 aa5.54□□□□□ -1.52
CTDSPL2-204ENST00000558966 ITPAQ9BY32 194 aa5.54□□□□□ -1.52
CTDSPL2-204ENST00000558966 PROK2Q9HC23 129 aa5.54□□□□□ -1.52
CTDSPL2-204ENST00000558966 MYNNQ9NPC7 610 aa5.54□□□□□ -1.52
CTDSPL2-204ENST00000558966 RRAGDQ9NQL2 400 aaPredicted RBP5.54□□□□□ -1.52
CTDSPL2-204ENST00000558966 SACM1LQ9NTJ5 587 aa5.54□□□□□ -1.52
CTDSPL2-204ENST00000558966 EHD3Q9NZN3 535 aa5.54□□□□□ -1.52
CTDSPL2-204ENST00000558966 PLEKHB1Q9UF11 243 aaPredicted RBP5.54□□□□□ -1.52
CTDSPL2-204ENST00000558966 SH3BGRL2Q9UJC5 107 aa5.54□□□□□ -1.52
CTDSPL2-204ENST00000558966 TINAGQ9UJW2 476 aa5.54□□□□□ -1.52
CTDSPL2-204ENST00000558966 PSME2Q9UL46 239 aa5.54□□□□□ -1.52
CTDSPL2-204ENST00000558966 EXO1Q9UQ84 846 aaKnown RBP5.54□□□□□ -1.52
CTDSPL2-204ENST00000558966 FIS1Q9Y3D6 152 aa5.54□□□□□ -1.52
CTDSPL2-204ENST00000558966 DNAJC15Q9Y5T4 150 aa5.54□□□□□ -1.52
CTDSPL2-204ENST00000558966 CHCHD2Q9Y6H1 151 aaPredicted RBP5.54□□□□□ -1.52
CTDSPL2-204ENST00000558966 MED12Q93074 2177 aa5.53□□□□□ -1.52
CTDSPL2-204ENST00000558966 FAM166BA8MTA8 275 aa5.53□□□□□ -1.52
CTDSPL2-204ENST00000558966 RGS16O15492 202 aaPredicted RBP5.53□□□□□ -1.52
CTDSPL2-204ENST00000558966 LRATO95237 230 aa5.53□□□□□ -1.52
CTDSPL2-204ENST00000558966 TUBBP07437 444 aa5.53□□□□□ -1.52
CTDSPL2-204ENST00000558966 GP1BBP13224 206 aa5.53□□□□□ -1.52
CTDSPL2-204ENST00000558966 DDCP20711 480 aa5.53□□□□□ -1.52
CTDSPL2-204ENST00000558966 CNR1P21554 472 aa5.53□□□□□ -1.52
CTDSPL2-204ENST00000558966 GSTM5P46439 218 aa5.53□□□□□ -1.52
CTDSPL2-204ENST00000558966 EMDP50402 254 aa5.53□□□□□ -1.52
CTDSPL2-204ENST00000558966 RBPJQ06330 500 aa5.53□□□□□ -1.52
CTDSPL2-204ENST00000558966 C2orf80Q0P641 193 aa5.53□□□□□ -1.52
CTDSPL2-204ENST00000558966 HEPACAMQ14CZ8 416 aa5.53□□□□□ -1.52
CTDSPL2-204ENST00000558966 TESK1Q15569 626 aa5.53□□□□□ -1.52
CTDSPL2-204ENST00000558966 NNATQ16517 81 aa5.53□□□□□ -1.52
CTDSPL2-204ENST00000558966 NTRK2Q16620 822 aa5.53□□□□□ -1.52
CTDSPL2-204ENST00000558966 UGT3A2Q3SY77 523 aa5.53□□□□□ -1.52
CTDSPL2-204ENST00000558966 NKAPLQ5M9Q1 402 aa5.53□□□□□ -1.52
CTDSPL2-204ENST00000558966 CEP85LQ5SZL2 805 aa5.53□□□□□ -1.52
CTDSPL2-204ENST00000558966 C6orf163Q5TEZ5 329 aa5.53□□□□□ -1.52
CTDSPL2-204ENST00000558966 PRAMEF20Q5VT98 475 aa5.53□□□□□ -1.52
CTDSPL2-204ENST00000558966 FAM47EQ6ZV65 393 aa5.53□□□□□ -1.52
CTDSPL2-204ENST00000558966 EXOC3L1Q86VI1 746 aa5.53□□□□□ -1.52
CTDSPL2-204ENST00000558966 TICAM1Q8IUC6 712 aa5.53□□□□□ -1.52
CTDSPL2-204ENST00000558966 SPPL2CQ8IUH8 684 aa5.53□□□□□ -1.52
CTDSPL2-204ENST00000558966 OR10G3Q8NGC4 313 aa5.53□□□□□ -1.52
CTDSPL2-204ENST00000558966 OR52R1Q8NGF1 315 aa5.53□□□□□ -1.52
CTDSPL2-204ENST00000558966 OR52N2Q8NGI0 321 aa5.53□□□□□ -1.52
CTDSPL2-204ENST00000558966 CDC26Q8NHZ8 85 aa5.53□□□□□ -1.52
CTDSPL2-204ENST00000558966 FAM76AQ8TAV0 307 aa5.53□□□□□ -1.52
CTDSPL2-204ENST00000558966 AGR3Q8TD06 166 aa5.53□□□□□ -1.52
CTDSPL2-204ENST00000558966 ZNF675Q8TD23 568 aa5.53□□□□□ -1.52
CTDSPL2-204ENST00000558966 MAGED4Q96JG8 741 aa5.53□□□□□ -1.52
CTDSPL2-204ENST00000558966 PKNOX2Q96KN3 472 aa5.53□□□□□ -1.52
CTDSPL2-204ENST00000558966 EGLN2Q96KS0 407 aa5.53□□□□□ -1.52
CTDSPL2-204ENST00000558966 FCRL1Q96LA6 429 aa5.53□□□□□ -1.52
CTDSPL2-204ENST00000558966 TTTY12Q9BZ98 90 aa5.53□□□□□ -1.52
CTDSPL2-204ENST00000558966 NXF5Q9H1B4 397 aaKnown RBP5.53□□□□□ -1.52
CTDSPL2-204ENST00000558966 ZDHHC11Q9H8X9 412 aa5.53□□□□□ -1.52
CTDSPL2-204ENST00000558966 ANKRA2Q9H9E1 313 aa5.53□□□□□ -1.52
CTDSPL2-204ENST00000558966 PFDN4Q9NQP4 134 aa5.53□□□□□ -1.52
CTDSPL2-204ENST00000558966 SLC35C2Q9NQQ7 365 aa5.53□□□□□ -1.52
CTDSPL2-204ENST00000558966 C1orf109Q9NX04 203 aa5.53□□□□□ -1.52
CTDSPL2-204ENST00000558966 TUBA8Q9NY65 449 aaPredicted RBP5.53□□□□□ -1.52
CTDSPL2-204ENST00000558966 SENP1Q9P0U3 644 aa5.53□□□□□ -1.52
CTDSPL2-204ENST00000558966 BCAP29Q9UHQ4 241 aa5.53□□□□□ -1.52
CTDSPL2-204ENST00000558966 FBXL7Q9UJT9 491 aa5.53□□□□□ -1.52
CTDSPL2-204ENST00000558966 CNOT11Q9UKZ1 510 aaKnown RBP5.53□□□□□ -1.52
CTDSPL2-204ENST00000558966 ENTPD4Q9Y227 616 aa5.53□□□□□ -1.52
CTDSPL2-204ENST00000558966 ZNF780BQ9Y6R6 833 aa5.53□□□□□ -1.52
CTDSPL2-204ENST00000558966 DCHS2Q6V1P9 2916 aa5.52□□□□□ -1.53
CTDSPL2-204ENST00000558966 PKDREJQ9NTG1 2253 aa5.52□□□□□ -1.53
CTDSPL2-204ENST00000558966 LRBAP50851 2863 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms