RNA–Protein interactions for RNA: ENST00000558855.5

VPS18-203, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS18, Length 1,050 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-203ENST00000558855 TMEM107Q6UX40 140 aa12.28□□□□□ -0.44
VPS18-203ENST00000558855 FRMD7Q6ZUT3 714 aa12.28□□□□□ -0.44
VPS18-203ENST00000558855 LARP4Q71RC2 724 aaKnown RBP eCLIP12.28□□□□□ -0.44
VPS18-203ENST00000558855 PLCZ1Q86YW0 608 aa12.28□□□□□ -0.44
VPS18-203ENST00000558855 FAM9CQ8IZT9 166 aa12.28□□□□□ -0.44
VPS18-203ENST00000558855 GBP7Q8N8V2 638 aaPredicted RBP12.28□□□□□ -0.44
VPS18-203ENST00000558855 OR5M1Q8NGP8 315 aa12.28□□□□□ -0.44
VPS18-203ENST00000558855 OR2T11Q8NH01 316 aa12.28□□□□□ -0.44
VPS18-203ENST00000558855 ZPLD1Q8TCW7 415 aa12.28□□□□□ -0.44
VPS18-203ENST00000558855 NPAS1Q99742 590 aa12.28□□□□□ -0.44
VPS18-203ENST00000558855 CXXC4Q9H2H0 198 aa12.28□□□□□ -0.44
VPS18-203ENST00000558855 GLIPR2Q9H4G4 154 aa12.28□□□□□ -0.44
VPS18-203ENST00000558855 TAS2R10Q9NYW0 307 aa12.28□□□□□ -0.44
VPS18-203ENST00000558855 RAI1Q7Z5J4 1906 aaPredicted RBP12.28□□□□□ -0.44
VPS18-203ENST00000558855 HEATR5AQ86XA9 2040 aa12.28□□□□□ -0.44
VPS18-203ENST00000558855 ABCA4P78363 2273 aa12.27□□□□□ -0.44
VPS18-203ENST00000558855 SMIM23A6NLE4 172 aa12.27□□□□□ -0.45
VPS18-203ENST00000558855 FAM47E-STBD1D6RA91 191 aa12.27□□□□□ -0.45
VPS18-203ENST00000558855 H0Y3Z8 333 aa12.27□□□□□ -0.45
VPS18-203ENST00000558855 UPK1AO00322 258 aa12.27□□□□□ -0.45
VPS18-203ENST00000558855 PLOD2O00469 737 aa12.27□□□□□ -0.45
VPS18-203ENST00000558855 FADS1O60427 444 aa12.27□□□□□ -0.45
VPS18-203ENST00000558855 PLIN3O60664 434 aa12.27□□□□□ -0.45
VPS18-203ENST00000558855 CBR3O75828 277 aa12.27□□□□□ -0.45
VPS18-203ENST00000558855 IGKV1D-16P01601 117 aa12.27□□□□□ -0.45
VPS18-203ENST00000558855 GSTA1P08263 222 aa12.27□□□□□ -0.45
VPS18-203ENST00000558855 ZNF708P17019 499 aa12.27□□□□□ -0.45
VPS18-203ENST00000558855 DDCP20711 480 aa12.27□□□□□ -0.45
VPS18-203ENST00000558855 SRD5A2P31213 254 aa12.27□□□□□ -0.45
VPS18-203ENST00000558855 ZNF763Q0D2J5 394 aa12.27□□□□□ -0.45
VPS18-203ENST00000558855 KIAA0040Q15053 153 aa12.27□□□□□ -0.45
VPS18-203ENST00000558855 POU4F3Q15319 338 aa12.27□□□□□ -0.45
VPS18-203ENST00000558855 SPDYAQ5MJ70 313 aa12.27□□□□□ -0.45
VPS18-203ENST00000558855 SH2D4BQ5SQS7 431 aa12.27□□□□□ -0.45
VPS18-203ENST00000558855 APOOLQ6UXV4 268 aa12.27□□□□□ -0.45
VPS18-203ENST00000558855 LUZP2Q86TE4 346 aa12.27□□□□□ -0.45
VPS18-203ENST00000558855 IFNEQ86WN2 208 aa12.27□□□□□ -0.45
VPS18-203ENST00000558855 SLC22A9Q8IVM8 553 aa12.27□□□□□ -0.45
VPS18-203ENST00000558855 IFT20Q8IY31 132 aa12.27□□□□□ -0.45
VPS18-203ENST00000558855 FADS6Q8N9I5 356 aa12.27□□□□□ -0.45
VPS18-203ENST00000558855 ACMSDQ8TDX5 336 aa12.27□□□□□ -0.45
VPS18-203ENST00000558855 EPS8L3Q8TE67 593 aaKnown RBP12.27□□□□□ -0.45
VPS18-203ENST00000558855 INTS12Q96CB8 462 aaKnown RBP12.27□□□□□ -0.45
VPS18-203ENST00000558855 TMUB1Q9BVT8 246 aa12.27□□□□□ -0.45
VPS18-203ENST00000558855 TUBB1Q9H4B7 451 aa12.27□□□□□ -0.45
VPS18-203ENST00000558855 CALHM2Q9HA72 323 aa12.27□□□□□ -0.45
VPS18-203ENST00000558855 MYNNQ9NPC7 610 aa12.27□□□□□ -0.45
VPS18-203ENST00000558855 NMRK1Q9NWW6 199 aa12.27□□□□□ -0.45
VPS18-203ENST00000558855 GALNT8Q9NY28 637 aa12.27□□□□□ -0.45
VPS18-203ENST00000558855 ACANP16112 2415 aa12.27□□□□□ -0.45
VPS18-203ENST00000558855 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.26□□□□□ -0.45
VPS18-203ENST00000558855 GXYLT2A0PJZ3 443 aa12.26□□□□□ -0.45
VPS18-203ENST00000558855 SHISA8B8ZZ34 492 aa12.26□□□□□ -0.45
VPS18-203ENST00000558855 SIAH2O43255 324 aa12.26□□□□□ -0.45
VPS18-203ENST00000558855 HCRTR2O43614 444 aa12.26□□□□□ -0.45
VPS18-203ENST00000558855 TNFSF13O75888 250 aa12.26□□□□□ -0.45
VPS18-203ENST00000558855 MYL2P10916 166 aa12.26□□□□□ -0.45
VPS18-203ENST00000558855 NCBP2P52298 156 aaKnown RBP eCLIP12.26□□□□□ -0.45
VPS18-203ENST00000558855 DGKQP52824 942 aa12.26□□□□□ -0.45
VPS18-203ENST00000558855 STX5Q13190 355 aa12.26□□□□□ -0.45
VPS18-203ENST00000558855 DAZAP2Q15038 168 aaPredicted RBP12.26□□□□□ -0.45
VPS18-203ENST00000558855 ERCC6LQ2NKX8 1250 aa12.26□□□□□ -0.45
VPS18-203ENST00000558855 LGSNQ5TDP6 509 aa12.26□□□□□ -0.45
VPS18-203ENST00000558855 ZNF551Q7Z340 670 aaPredicted RBP12.26□□□□□ -0.45
VPS18-203ENST00000558855 TRIM46Q7Z4K8 759 aa12.26□□□□□ -0.45
VPS18-203ENST00000558855 ZAR1Q86SH2 424 aa12.26□□□□□ -0.45
VPS18-203ENST00000558855 GALNT10Q86SR1 603 aa12.26□□□□□ -0.45
VPS18-203ENST00000558855 LCA5Q86VQ0 697 aa12.26□□□□□ -0.45
VPS18-203ENST00000558855 OR2M3Q8NG83 312 aa12.26□□□□□ -0.45
VPS18-203ENST00000558855 FAM222BQ8WU58 562 aa12.26□□□□□ -0.45
VPS18-203ENST00000558855 GFM2Q969S9 779 aaKnown RBP12.26□□□□□ -0.45
VPS18-203ENST00000558855 AMDHD1Q96NU7 426 aa12.26□□□□□ -0.45
VPS18-203ENST00000558855 DSN1Q9H410 356 aa12.26□□□□□ -0.45
VPS18-203ENST00000558855 GIMAP2Q9UG22 337 aa12.26□□□□□ -0.45
VPS18-203ENST00000558855 FLNAP21333 2647 aaKnown RBP12.25□□□□□ -0.45
VPS18-203ENST00000558855 CDH16O75309 829 aa12.25□□□□□ -0.45
VPS18-203ENST00000558855 GLRA3O75311 464 aa12.25□□□□□ -0.45
VPS18-203ENST00000558855 RCBTB2O95199 551 aa12.25□□□□□ -0.45
VPS18-203ENST00000558855 CD1EP15812 388 aa12.25□□□□□ -0.45
VPS18-203ENST00000558855 EFNA1P20827 205 aaPredicted RBP12.25□□□□□ -0.45
VPS18-203ENST00000558855 DPP4P27487 766 aa12.25□□□□□ -0.45
VPS18-203ENST00000558855 IL12BP29460 328 aa12.25□□□□□ -0.45
VPS18-203ENST00000558855 CCKARP32238 428 aa12.25□□□□□ -0.45
VPS18-203ENST00000558855 EVI2BP34910 448 aa12.25□□□□□ -0.45
VPS18-203ENST00000558855 SUCLG1P53597 346 aaKnown RBP12.25□□□□□ -0.45
VPS18-203ENST00000558855 PNLIPRP2P54317 469 aa12.25□□□□□ -0.45
VPS18-203ENST00000558855 GAB1Q13480 694 aa12.25□□□□□ -0.45
VPS18-203ENST00000558855 RCAN2Q14206 197 aa12.25□□□□□ -0.45
VPS18-203ENST00000558855 HEPACAMQ14CZ8 416 aa12.25□□□□□ -0.45
VPS18-203ENST00000558855 PCLAFQ15004 111 aa12.25□□□□□ -0.45
VPS18-203ENST00000558855 NOXRED1Q6NXP6 359 aa12.25□□□□□ -0.45
VPS18-203ENST00000558855 VWA1Q6PCB0 445 aa12.25□□□□□ -0.45
VPS18-203ENST00000558855 KRTAP1-3Q8IUG1 177 aa12.25□□□□□ -0.45
VPS18-203ENST00000558855 UBQLNLQ8IYU4 475 aa12.25□□□□□ -0.45
VPS18-203ENST00000558855 C4orf33Q8N1A6 199 aa12.25□□□□□ -0.45
VPS18-203ENST00000558855 OR2L13Q8N349 312 aa12.25□□□□□ -0.45
VPS18-203ENST00000558855 CEP112Q8N8E3 955 aa12.25□□□□□ -0.45
VPS18-203ENST00000558855 CLHC1Q8NHS4 586 aa12.25□□□□□ -0.45
VPS18-203ENST00000558855 NUDT8Q8WV74 236 aa12.25□□□□□ -0.45
VPS18-203ENST00000558855 FIG4Q92562 907 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms