RNA–Protein interactions for RNA: ENST00000558428.5

SMAD3-205, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-205ENST00000558428 MOAP1Q96BY2 351 aa11.34□□□□□ -0.59
SMAD3-205ENST00000558428 EFHD2Q96C19 240 aaPredicted RBP11.34□□□□□ -0.59
SMAD3-205ENST00000558428 TMCO6Q96DC7 493 aa11.34□□□□□ -0.59
SMAD3-205ENST00000558428 SLC35A4Q96G79 324 aa11.34□□□□□ -0.59
SMAD3-205ENST00000558428 JSRP1Q96MG2 331 aaPredicted RBP11.34□□□□□ -0.59
SMAD3-205ENST00000558428 RILPQ96NA2 401 aa11.34□□□□□ -0.59
SMAD3-205ENST00000558428 NODALQ96S42 347 aa11.34□□□□□ -0.59
SMAD3-205ENST00000558428 ADOQ96SZ5 270 aa11.34□□□□□ -0.59
SMAD3-205ENST00000558428 YIPF4Q9BSR8 244 aa11.34□□□□□ -0.59
SMAD3-205ENST00000558428 CCDC28BQ9BUN5 200 aa11.34□□□□□ -0.59
SMAD3-205ENST00000558428 IL1RL2Q9HB29 575 aa11.34□□□□□ -0.59
SMAD3-205ENST00000558428 PROK2Q9HC23 129 aa11.34□□□□□ -0.59
SMAD3-205ENST00000558428 NPHS2Q9NP85 383 aa11.34□□□□□ -0.59
SMAD3-205ENST00000558428 FAM120CQ9NX05 1096 aaKnown RBP11.34□□□□□ -0.59
SMAD3-205ENST00000558428 ZIM2Q9NZV7 527 aa11.34□□□□□ -0.59
SMAD3-205ENST00000558428 BOKQ9UMX3 212 aaPredicted RBP11.34□□□□□ -0.59
SMAD3-205ENST00000558428 UBR5O95071 2799 aaPredicted RBP11.34□□□□□ -0.59
SMAD3-205ENST00000558428 NCKAP5O14513 1909 aa11.34□□□□□ -0.59
SMAD3-205ENST00000558428 MYO7BQ6PIF6 2116 aa11.33□□□□□ -0.6
SMAD3-205ENST00000558428 TENM4Q6N022 2769 aa11.33□□□□□ -0.6
SMAD3-205ENST00000558428 PRSS51A0A1B0GVH4 220 aa11.33□□□□□ -0.6
SMAD3-205ENST00000558428 GXYLT2A0PJZ3 443 aa11.33□□□□□ -0.6
SMAD3-205ENST00000558428 ANKRD33BA6NCL7 494 aa11.33□□□□□ -0.6
SMAD3-205ENST00000558428 ASNA1O43681 348 aa11.33□□□□□ -0.6
SMAD3-205ENST00000558428 SCN2BO60939 215 aa11.33□□□□□ -0.6
SMAD3-205ENST00000558428 SLC22A3O75751 556 aa11.33□□□□□ -0.6
SMAD3-205ENST00000558428 GLSO94925 669 aaPredicted RBP11.33□□□□□ -0.6
SMAD3-205ENST00000558428 NKX2-2O95096 273 aa11.33□□□□□ -0.6
SMAD3-205ENST00000558428 KCNH1O95259 989 aa11.33□□□□□ -0.6
SMAD3-205ENST00000558428 HMGN2P05204 90 aaKnown RBP11.33□□□□□ -0.6
SMAD3-205ENST00000558428 PGRP06401 933 aa11.33□□□□□ -0.6
SMAD3-205ENST00000558428 ACP2P11117 423 aa11.33□□□□□ -0.6
SMAD3-205ENST00000558428 RFX3P48380 749 aa11.33□□□□□ -0.6
SMAD3-205ENST00000558428 DGKQP52824 942 aa11.33□□□□□ -0.6
SMAD3-205ENST00000558428 PNLIPRP2P54317 469 aa11.33□□□□□ -0.6
SMAD3-205ENST00000558428 STX1BP61266 288 aa11.33□□□□□ -0.6
SMAD3-205ENST00000558428 GUCY1A3Q02108 690 aa11.33□□□□□ -0.6
SMAD3-205ENST00000558428 EFR3AQ14156 821 aa11.33□□□□□ -0.6
SMAD3-205ENST00000558428 ZCCHC12Q6PEW1 402 aa11.33□□□□□ -0.6
SMAD3-205ENST00000558428 BHLHB9Q6PI77 547 aa11.33□□□□□ -0.6
SMAD3-205ENST00000558428 PAOXQ6QHF9 649 aa11.33□□□□□ -0.6
SMAD3-205ENST00000558428 GHDCQ8N2G8 530 aa11.33□□□□□ -0.6
SMAD3-205ENST00000558428 MIER2Q8N344 545 aa11.33□□□□□ -0.6
SMAD3-205ENST00000558428 SLC16A11Q8NCK7 471 aa11.33□□□□□ -0.6
SMAD3-205ENST00000558428 OR52N2Q8NGI0 321 aa11.33□□□□□ -0.6
SMAD3-205ENST00000558428 PRR7Q8TB68 274 aa11.33□□□□□ -0.6
SMAD3-205ENST00000558428 PIK3R3Q92569 461 aa11.33□□□□□ -0.6
SMAD3-205ENST00000558428 HOXB13Q92826 284 aaPredicted RBP11.33□□□□□ -0.6
SMAD3-205ENST00000558428 OTUB1Q96FW1 271 aaPredicted RBP11.33□□□□□ -0.6
SMAD3-205ENST00000558428 CHMP6Q96FZ7 201 aa11.33□□□□□ -0.6
SMAD3-205ENST00000558428 RMND5BQ96G75 393 aaPredicted RBP11.33□□□□□ -0.6
SMAD3-205ENST00000558428 C16orf58Q96GQ5 468 aa11.33□□□□□ -0.6
SMAD3-205ENST00000558428 ZNF597Q96LX8 424 aa11.33□□□□□ -0.6
SMAD3-205ENST00000558428 OR52E6Q96RD3 313 aa11.33□□□□□ -0.6
SMAD3-205ENST00000558428 OSBPL11Q9BXB4 747 aa11.33□□□□□ -0.6
SMAD3-205ENST00000558428 ANGPTL4Q9BY76 406 aa11.33□□□□□ -0.6
SMAD3-205ENST00000558428 ZFP64Q9NPA5 681 aa11.33□□□□□ -0.6
SMAD3-205ENST00000558428 SDR39U1Q9NRG7 319 aaPredicted RBP11.33□□□□□ -0.6
SMAD3-205ENST00000558428 KLRF1Q9NZS2 232 aa11.33□□□□□ -0.6
SMAD3-205ENST00000558428 DCTN4Q9UJW0 460 aa11.33□□□□□ -0.6
SMAD3-205ENST00000558428 MRTO4Q9UKD2 239 aaKnown RBP11.33□□□□□ -0.6
SMAD3-205ENST00000558428 BAHCC1Q9P281 2608 aa11.33□□□□□ -0.6
SMAD3-205ENST00000558428 RNF103-CHMP3A0A140T963 221 aa11.32□□□□□ -0.6
SMAD3-205ENST00000558428 PRAMEF25A6NGN4 478 aa11.32□□□□□ -0.6
SMAD3-205ENST00000558428 CDC40O60508 579 aaKnown RBP eCLIP11.32□□□□□ -0.6
SMAD3-205ENST00000558428 SNX4O95219 450 aa11.32□□□□□ -0.6
SMAD3-205ENST00000558428 IL33O95760 270 aa11.32□□□□□ -0.6
SMAD3-205ENST00000558428 ALOX5P09917 674 aa11.32□□□□□ -0.6
SMAD3-205ENST00000558428 CYP4B1P13584 511 aa11.32□□□□□ -0.6
SMAD3-205ENST00000558428 MAP3K8P41279 467 aa11.32□□□□□ -0.6
SMAD3-205ENST00000558428 MASP1P48740 699 aa11.32□□□□□ -0.6
SMAD3-205ENST00000558428 PSMD4P55036 377 aaKnown RBP11.32□□□□□ -0.6
SMAD3-205ENST00000558428 MRPS22P82650 360 aaKnown RBP11.32□□□□□ -0.6
SMAD3-205ENST00000558428 RBPJQ06330 500 aa11.32□□□□□ -0.6
SMAD3-205ENST00000558428 DUSP5Q16690 384 aa11.32□□□□□ -0.6
SMAD3-205ENST00000558428 CMPK2Q5EBM0 449 aa11.32□□□□□ -0.6
SMAD3-205ENST00000558428 SLC30A6Q6NXT4 461 aa11.32□□□□□ -0.6
SMAD3-205ENST00000558428 CDC73Q6P1J9 531 aa11.32□□□□□ -0.6
SMAD3-205ENST00000558428 TMEM81Q6P7N7 255 aa11.32□□□□□ -0.6
SMAD3-205ENST00000558428 BNC2Q6ZN30 1099 aaPredicted RBP11.32□□□□□ -0.6
SMAD3-205ENST00000558428 PACS2Q86VP3 889 aa11.32□□□□□ -0.6
SMAD3-205ENST00000558428 FAM109AQ8N4B1 249 aa11.32□□□□□ -0.6
SMAD3-205ENST00000558428 TMEM251Q8N6I4 163 aa11.32□□□□□ -0.6
SMAD3-205ENST00000558428 COX18Q8N8Q8 333 aa11.32□□□□□ -0.6
SMAD3-205ENST00000558428 OR9I1Q8NGQ6 314 aa11.32□□□□□ -0.6
SMAD3-205ENST00000558428 RFWD2Q8NHY2 731 aa11.32□□□□□ -0.6
SMAD3-205ENST00000558428 ACTRT3Q9BYD9 372 aa11.32□□□□□ -0.6
SMAD3-205ENST00000558428 DEFB127Q9H1M4 99 aa11.32□□□□□ -0.6
SMAD3-205ENST00000558428 BTNL2Q9UIR0 455 aa11.32□□□□□ -0.6
SMAD3-205ENST00000558428 FAF1Q9UNN5 650 aaPredicted RBP11.32□□□□□ -0.6
SMAD3-205ENST00000558428 OSGIN2Q9Y236 505 aa11.32□□□□□ -0.6
SMAD3-205ENST00000558428 FLNCQ14315 2725 aa11.32□□□□□ -0.6
SMAD3-205ENST00000558428 A0A0G2JND7 137 aa11.31□□□□□ -0.6
SMAD3-205ENST00000558428 LRRC3CA6NJW4 275 aa11.31□□□□□ -0.6
SMAD3-205ENST00000558428 GNB5O14775 395 aa11.31□□□□□ -0.6
SMAD3-205ENST00000558428 ICOSLGO75144 302 aa11.31□□□□□ -0.6
SMAD3-205ENST00000558428 TRIM3O75382 744 aaPredicted RBP11.31□□□□□ -0.6
SMAD3-205ENST00000558428 PDE9AO76083 593 aa11.31□□□□□ -0.6
SMAD3-205ENST00000558428 IL6P05231 212 aa11.31□□□□□ -0.6
SMAD3-205ENST00000558428 VIMP08670 466 aaKnown RBP11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms