RNA–Protein interactions for RNA: ENST00000558288.1

HMG20A-204, Transcript of high mobility group 20A, humanhuman

Gene HMG20A, Length 3,558 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-204ENST00000558288 FUBP3Q96I24 572 aaKnown RBP eCLIP4.78□□□□□ -1.64
HMG20A-204ENST00000558288 KLHL15Q96M94 604 aa4.78□□□□□ -1.64
HMG20A-204ENST00000558288 SFXN2Q96NB2 322 aa4.78□□□□□ -1.64
HMG20A-204ENST00000558288 HHIPQ96QV1 700 aa4.78□□□□□ -1.64
HMG20A-204ENST00000558288 DDOQ99489 341 aa4.78□□□□□ -1.64
HMG20A-204ENST00000558288 SOSTQ9BQB4 213 aa4.78□□□□□ -1.64
HMG20A-204ENST00000558288 UQCC2Q9BRT2 126 aa4.78□□□□□ -1.64
HMG20A-204ENST00000558288 FNDC11Q9BVV2 318 aa4.78□□□□□ -1.64
HMG20A-204ENST00000558288 SLC12A9Q9BXP2 914 aa4.78□□□□□ -1.64
HMG20A-204ENST00000558288 RNF32Q9H0A6 362 aa4.78□□□□□ -1.64
HMG20A-204ENST00000558288 REEP4Q9H6H4 257 aa4.78□□□□□ -1.64
HMG20A-204ENST00000558288 RC3H2Q9HBD1 1191 aaKnown RBP4.78□□□□□ -1.64
HMG20A-204ENST00000558288 MIEF1Q9NQG6 463 aa4.78□□□□□ -1.64
HMG20A-204ENST00000558288 DLL4Q9NR61 685 aa4.78□□□□□ -1.64
HMG20A-204ENST00000558288 C1GALT1Q9NS00 363 aa4.78□□□□□ -1.64
HMG20A-204ENST00000558288 ZMAT5Q9UDW3 170 aaKnown RBP4.78□□□□□ -1.64
HMG20A-204ENST00000558288 SCP2D1Q9UJQ7 156 aa4.78□□□□□ -1.64
HMG20A-204ENST00000558288 ACSL5Q9ULC5 683 aa4.78□□□□□ -1.64
HMG20A-204ENST00000558288 EXOSC1Q9Y3B2 195 aaKnown RBP4.78□□□□□ -1.64
HMG20A-204ENST00000558288 SF3B6Q9Y3B4 125 aaKnown RBP4.78□□□□□ -1.64
HMG20A-204ENST00000558288 PIKFYVEQ9Y2I7 2098 aa4.78□□□□□ -1.65
HMG20A-204ENST00000558288 GPR179Q6PRD1 2367 aa4.77□□□□□ -1.65
HMG20A-204ENST00000558288 A0A1W2PRB8 838 aa4.77□□□□□ -1.65
HMG20A-204ENST00000558288 TCRBV16S1A1N1A0A5B0 115 aa4.77□□□□□ -1.65
HMG20A-204ENST00000558288 K7ERQ8 282 aa4.77□□□□□ -1.65
HMG20A-204ENST00000558288 CLDN11O75508 207 aa4.77□□□□□ -1.65
HMG20A-204ENST00000558288 GATBO75879 557 aaKnown RBP4.77□□□□□ -1.65
HMG20A-204ENST00000558288 LALBAP00709 142 aa4.77□□□□□ -1.65
HMG20A-204ENST00000558288 PDGFBP01127 241 aaPredicted RBP4.77□□□□□ -1.65
HMG20A-204ENST00000558288 TGFB1P01137 390 aa4.77□□□□□ -1.65
HMG20A-204ENST00000558288 EPHX1P07099 455 aa4.77□□□□□ -1.65
HMG20A-204ENST00000558288 ACP2P11117 423 aa4.77□□□□□ -1.65
HMG20A-204ENST00000558288 FGF9P31371 208 aaPredicted RBP4.77□□□□□ -1.65
HMG20A-204ENST00000558288 TIA1P31483 386 aaKnown RBP eCLIP4.77□□□□□ -1.651e-6■■□□□ 13
HMG20A-204ENST00000558288 VIPR1P32241 457 aa4.77□□□□□ -1.65
HMG20A-204ENST00000558288 GIPRP48546 466 aa4.77□□□□□ -1.65
HMG20A-204ENST00000558288 CDH11P55287 796 aa4.77□□□□□ -1.65
HMG20A-204ENST00000558288 RAE1P78406 368 aaKnown RBP4.77□□□□□ -1.65
HMG20A-204ENST00000558288 ARF5P84085 180 aa4.77□□□□□ -1.65
HMG20A-204ENST00000558288 NHLH1Q02575 133 aa4.77□□□□□ -1.65
HMG20A-204ENST00000558288 RAB40BQ12829 278 aa4.77□□□□□ -1.65
HMG20A-204ENST00000558288 MAP4K2Q12851 820 aa4.77□□□□□ -1.65
HMG20A-204ENST00000558288 SMAD4Q13485 552 aaKnown RBP4.77□□□□□ -1.65
HMG20A-204ENST00000558288 DUSP6Q16828 381 aa4.77□□□□□ -1.65
HMG20A-204ENST00000558288 CTXN3Q4LDR2 81 aa4.77□□□□□ -1.65
HMG20A-204ENST00000558288 TCTE1Q5JU00 501 aa4.77□□□□□ -1.65
HMG20A-204ENST00000558288 LYPLAL1Q5VWZ2 237 aa4.77□□□□□ -1.65
HMG20A-204ENST00000558288 SLC36A4Q6YBV0 504 aa4.77□□□□□ -1.65
HMG20A-204ENST00000558288 SLC24A5Q71RS6 500 aa4.77□□□□□ -1.65
HMG20A-204ENST00000558288 TMPRSS11BQ86T26 416 aa4.77□□□□□ -1.65
HMG20A-204ENST00000558288 TSPAN33Q86UF1 283 aa4.77□□□□□ -1.65
HMG20A-204ENST00000558288 LRRC28Q86X40 367 aaPredicted RBP4.77□□□□□ -1.65
HMG20A-204ENST00000558288 SIAH3Q8IW03 269 aa4.77□□□□□ -1.65
HMG20A-204ENST00000558288 FAM26EQ8N5C1 309 aa4.77□□□□□ -1.65
HMG20A-204ENST00000558288 KREMEN2Q8NCW0 462 aa4.77□□□□□ -1.65
HMG20A-204ENST00000558288 OR2T4Q8NH00 348 aa4.77□□□□□ -1.65
HMG20A-204ENST00000558288 SLC7A13Q8TCU3 470 aa4.77□□□□□ -1.65
HMG20A-204ENST00000558288 SPRYD4Q8WW59 207 aaPredicted RBP4.77□□□□□ -1.65
HMG20A-204ENST00000558288 ASB12Q8WXK4 309 aa4.77□□□□□ -1.65
HMG20A-204ENST00000558288 VWCEQ96DN2 955 aa4.77□□□□□ -1.65
HMG20A-204ENST00000558288 SUSD3Q96L08 255 aa4.77□□□□□ -1.65
HMG20A-204ENST00000558288 FOPNLQ96NB1 174 aa4.77□□□□□ -1.65
HMG20A-204ENST00000558288 FCRL4Q96PJ5 515 aa4.77□□□□□ -1.65
HMG20A-204ENST00000558288 TBX5Q99593 518 aa4.77□□□□□ -1.65
HMG20A-204ENST00000558288 POLDIP3Q9BY77 421 aaKnown RBP4.77□□□□□ -1.65
HMG20A-204ENST00000558288 ZNF436Q9C0F3 470 aaPredicted RBP4.77□□□□□ -1.65
HMG20A-204ENST00000558288 BHLHE41Q9C0J9 482 aaPredicted RBP4.77□□□□□ -1.65
HMG20A-204ENST00000558288 SLC6A15Q9H2J7 730 aa4.77□□□□□ -1.65
HMG20A-204ENST00000558288 EGLN3Q9H6Z9 239 aa4.77□□□□□ -1.65
HMG20A-204ENST00000558288 MVB12BQ9H7P6 319 aa4.77□□□□□ -1.65
HMG20A-204ENST00000558288 BRD9Q9H8M2 597 aa4.77□□□□□ -1.65
HMG20A-204ENST00000558288 CD93Q9NPY3 652 aa4.77□□□□□ -1.65
HMG20A-204ENST00000558288 SEC14L3Q9UDX4 400 aa4.77□□□□□ -1.65
HMG20A-204ENST00000558288 RASD1Q9Y272 281 aa4.77□□□□□ -1.65
HMG20A-204ENST00000558288 CFAP54Q96N23 3096 aa4.77□□□□□ -1.65
HMG20A-204ENST00000558288 DSPPQ9NZW4 1301 aa4.77□□□□□ -1.65
HMG20A-204ENST00000558288 TMEM129A0AVI4 362 aa4.77□□□□□ -1.65
HMG20A-204ENST00000558288 IRGMA1A4Y4 181 aa4.77□□□□□ -1.65
HMG20A-204ENST00000558288 C7orf66A4D0T2 115 aa4.77□□□□□ -1.65
HMG20A-204ENST00000558288 ARRDC5A6NEK1 342 aa4.77□□□□□ -1.65
HMG20A-204ENST00000558288 ARHGEF33A8MVX0 844 aa4.77□□□□□ -1.65
HMG20A-204ENST00000558288 M0R3H8 397 aa4.77□□□□□ -1.65
HMG20A-204ENST00000558288 GAPDHSO14556 408 aaPredicted RBP4.77□□□□□ -1.65
HMG20A-204ENST00000558288 PDCD5O14737 125 aa4.77□□□□□ -1.65
HMG20A-204ENST00000558288 MID1O15344 667 aa4.77□□□□□ -1.65
HMG20A-204ENST00000558288 CHST10O43529 356 aa4.77□□□□□ -1.65
HMG20A-204ENST00000558288 GPR37L1O60883 481 aa4.77□□□□□ -1.65
HMG20A-204ENST00000558288 F11P03951 625 aa4.77□□□□□ -1.65
HMG20A-204ENST00000558288 CBSLP0DN79 551 aa4.77□□□□□ -1.65
HMG20A-204ENST00000558288 OR12D1P0DN82 309 aa4.77□□□□□ -1.65
HMG20A-204ENST00000558288 ARAFP10398 606 aa4.77□□□□□ -1.65
HMG20A-204ENST00000558288 TFPIP10646 304 aa4.77□□□□□ -1.65
HMG20A-204ENST00000558288 CBSP35520 551 aa4.77□□□□□ -1.65
HMG20A-204ENST00000558288 HNF1BP35680 557 aa4.77□□□□□ -1.65
HMG20A-204ENST00000558288 SELENOPP49908 381 aa4.77□□□□□ -1.65
HMG20A-204ENST00000558288 TAS2R50P59544 299 aa4.77□□□□□ -1.65
HMG20A-204ENST00000558288 PFN3P60673 137 aa4.77□□□□□ -1.65
HMG20A-204ENST00000558288 TAP2Q03519 686 aa4.77□□□□□ -1.65
HMG20A-204ENST00000558288 ZNF763Q0D2J5 394 aa4.77□□□□□ -1.65
HMG20A-204ENST00000558288 CDKL4Q5MAI5 379 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms