RNA–Protein interactions for RNA: ENST00000557685.5

EFCAB11-213, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 3

Gene EFCAB11, Length 698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-213ENST00000557685 LRRTM2O43300 516 aa3.4□□□□□ -1.87
EFCAB11-213ENST00000557685 SRPX2O60687 465 aaPredicted RBP3.4□□□□□ -1.87
EFCAB11-213ENST00000557685 KBTBD11O94819 623 aa3.4□□□□□ -1.87
EFCAB11-213ENST00000557685 VENTXO95231 258 aa3.4□□□□□ -1.87
EFCAB11-213ENST00000557685 PRAMEF12O95522 483 aa3.4□□□□□ -1.87
EFCAB11-213ENST00000557685 TBX6O95947 436 aaPredicted RBP3.4□□□□□ -1.87
EFCAB11-213ENST00000557685 AK1P00568 194 aa3.4□□□□□ -1.87
EFCAB11-213ENST00000557685 HEXBP07686 556 aa3.4□□□□□ -1.87
EFCAB11-213ENST00000557685 GSTT2P0CG29 244 aa3.4□□□□□ -1.87
EFCAB11-213ENST00000557685 GSTT2BP0CG30 244 aa3.4□□□□□ -1.87
EFCAB11-213ENST00000557685 UQCRBP14927 111 aa3.4□□□□□ -1.87
EFCAB11-213ENST00000557685 PAICSP22234 425 aaKnown RBP3.4□□□□□ -1.87
EFCAB11-213ENST00000557685 IGFBP5P24593 272 aa3.4□□□□□ -1.87
EFCAB11-213ENST00000557685 CYP2F1P24903 491 aa3.4□□□□□ -1.87
EFCAB11-213ENST00000557685 ADRA1AP35348 466 aa3.4□□□□□ -1.87
EFCAB11-213ENST00000557685 ZNF33BQ06732 778 aa3.4□□□□□ -1.87
EFCAB11-213ENST00000557685 RAB35Q15286 201 aa3.4□□□□□ -1.87
EFCAB11-213ENST00000557685 MICAQ29983 383 aa3.4□□□□□ -1.87
EFCAB11-213ENST00000557685 DCAF4L1Q3SXM0 396 aa3.4□□□□□ -1.87
EFCAB11-213ENST00000557685 BTNL3Q6UXE8 466 aa3.4□□□□□ -1.87
EFCAB11-213ENST00000557685 HACD2Q6Y1H2 254 aa3.4□□□□□ -1.87
EFCAB11-213ENST00000557685 CEACAM19Q7Z692 300 aa3.4□□□□□ -1.87
EFCAB11-213ENST00000557685 GCNT2Q8N0V5 402 aa3.4□□□□□ -1.87
EFCAB11-213ENST00000557685 SLC22A18ASQ8N1D0 253 aa3.4□□□□□ -1.87
EFCAB11-213ENST00000557685 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.4□□□□□ -1.87
EFCAB11-213ENST00000557685 OR6T1Q8NGN1 323 aa3.4□□□□□ -1.87
EFCAB11-213ENST00000557685 ADIPOR1Q96A54 375 aa3.4□□□□□ -1.87
EFCAB11-213ENST00000557685 ZBED6CLQ96FA7 236 aaPredicted RBP3.4□□□□□ -1.87
EFCAB11-213ENST00000557685 ELMO2Q96JJ3 720 aa3.4□□□□□ -1.87
EFCAB11-213ENST00000557685 C1orf147Q96MC9 270 aaPredicted RBP3.4□□□□□ -1.87
EFCAB11-213ENST00000557685 RPP25Q9BUL9 199 aaKnown RBP3.4□□□□□ -1.87
EFCAB11-213ENST00000557685 IMPAD1Q9NX62 359 aa3.4□□□□□ -1.87
EFCAB11-213ENST00000557685 CLEC5AQ9NY25 188 aa3.4□□□□□ -1.87
EFCAB11-213ENST00000557685 EIF3LQ9Y262 564 aaKnown RBP3.4□□□□□ -1.87
EFCAB11-213ENST00000557685 CARMIL1Q5VZK9 1371 aa3.39□□□□□ -1.87
EFCAB11-213ENST00000557685 CCDC7Q96M83 1385 aa3.39□□□□□ -1.87
EFCAB11-213ENST00000557685 A0A1B0GUL7 405 aa3.39□□□□□ -1.87
EFCAB11-213ENST00000557685 TRIM49BA6NDI0 452 aa3.39□□□□□ -1.87
EFCAB11-213ENST00000557685 TM9SF1O15321 606 aa3.39□□□□□ -1.87
EFCAB11-213ENST00000557685 GPRIN2O60269 458 aa3.39□□□□□ -1.87
EFCAB11-213ENST00000557685 NOL3O60936 208 aaKnown RBP3.39□□□□□ -1.87
EFCAB11-213ENST00000557685 OR4F21O95013 312 aa3.39□□□□□ -1.87
EFCAB11-213ENST00000557685 IFNB1P01574 187 aa3.39□□□□□ -1.87
EFCAB11-213ENST00000557685 PIGRP01833 764 aa3.39□□□□□ -1.87
EFCAB11-213ENST00000557685 WNT2P09544 360 aa3.39□□□□□ -1.87
EFCAB11-213ENST00000557685 THRBP10828 461 aa3.39□□□□□ -1.87
EFCAB11-213ENST00000557685 GATA2P23769 480 aaPredicted RBP3.39□□□□□ -1.87
EFCAB11-213ENST00000557685 PTGFRP43088 359 aa3.39□□□□□ -1.87
EFCAB11-213ENST00000557685 POU3F4P49335 361 aa3.39□□□□□ -1.87
EFCAB11-213ENST00000557685 EMDP50402 254 aa3.39□□□□□ -1.87
EFCAB11-213ENST00000557685 HMGCS2P54868 508 aa3.39□□□□□ -1.87
EFCAB11-213ENST00000557685 NAPAP54920 295 aa3.39□□□□□ -1.87
EFCAB11-213ENST00000557685 TFDP1Q14186 410 aa3.39□□□□□ -1.87
EFCAB11-213ENST00000557685 LTB4RQ15722 352 aa3.39□□□□□ -1.87
EFCAB11-213ENST00000557685 PPP1R3AQ16821 1122 aa3.39□□□□□ -1.87
EFCAB11-213ENST00000557685 ZNF311Q5JNZ3 666 aa3.39□□□□□ -1.87
EFCAB11-213ENST00000557685 PNCKQ6P2M8 343 aa3.39□□□□□ -1.87
EFCAB11-213ENST00000557685 NIPAL3Q6P499 406 aa3.39□□□□□ -1.87
EFCAB11-213ENST00000557685 CCBE1Q6UXH8 406 aaPredicted RBP3.39□□□□□ -1.87
EFCAB11-213ENST00000557685 TMEM184AQ6ZMB5 413 aa3.39□□□□□ -1.87
EFCAB11-213ENST00000557685 LHFPL4Q7Z7J7 247 aa3.39□□□□□ -1.87
EFCAB11-213ENST00000557685 ERICH1Q86X53 443 aa3.39□□□□□ -1.87
EFCAB11-213ENST00000557685 RSPH1Q8WYR4 309 aa3.39□□□□□ -1.87
EFCAB11-213ENST00000557685 C11orf24Q96F05 449 aaPredicted RBP3.39□□□□□ -1.87
EFCAB11-213ENST00000557685 PIWIL1Q96J94 861 aaKnown RBP3.39□□□□□ -1.87
EFCAB11-213ENST00000557685 TBCDQ9BTW9 1192 aa3.39□□□□□ -1.87
EFCAB11-213ENST00000557685 MRPL13Q9BYD1 178 aaKnown RBP3.39□□□□□ -1.87
EFCAB11-213ENST00000557685 COQ10BQ9H8M1 238 aa3.39□□□□□ -1.87
EFCAB11-213ENST00000557685 FAM120CQ9NX05 1096 aaKnown RBP3.39□□□□□ -1.87
EFCAB11-213ENST00000557685 DHRS4-AS1Q9P1J3 65 aa3.39□□□□□ -1.87
EFCAB11-213ENST00000557685 ARMCX1Q9P291 453 aa3.39□□□□□ -1.87
EFCAB11-213ENST00000557685 BARX2Q9UMQ3 279 aaPredicted RBP3.39□□□□□ -1.87
EFCAB11-213ENST00000557685 RNF6Q9Y252 685 aa3.39□□□□□ -1.87
EFCAB11-213ENST00000557685 EXOSC1Q9Y3B2 195 aaKnown RBP3.39□□□□□ -1.87
EFCAB11-213ENST00000557685 ATP6V0A2Q9Y487 856 aa3.39□□□□□ -1.87
EFCAB11-213ENST00000557685 MFHAS1Q9Y4C4 1052 aa3.39□□□□□ -1.87
EFCAB11-213ENST00000557685 A0A1B0GWJ7 208 aa3.38□□□□□ -1.87
EFCAB11-213ENST00000557685 NDC80O14777 642 aa3.38□□□□□ -1.87
EFCAB11-213ENST00000557685 PHF1O43189 567 aaPredicted RBP3.38□□□□□ -1.87
EFCAB11-213ENST00000557685 LANCL1O43813 399 aa3.38□□□□□ -1.87
EFCAB11-213ENST00000557685 LCMT2O60294 686 aaKnown RBP3.38□□□□□ -1.87
EFCAB11-213ENST00000557685 RAMP1O60894 148 aa3.38□□□□□ -1.87
EFCAB11-213ENST00000557685 GUCA1CO95843 209 aa3.38□□□□□ -1.87
EFCAB11-213ENST00000557685 KRT6BP04259 564 aa3.38□□□□□ -1.87
EFCAB11-213ENST00000557685 NCF1P14598 390 aaPredicted RBP3.38□□□□□ -1.87
EFCAB11-213ENST00000557685 BCL3P20749 454 aa3.38□□□□□ -1.87
EFCAB11-213ENST00000557685 PTMSP20962 102 aa3.38□□□□□ -1.87
EFCAB11-213ENST00000557685 HPDP32754 393 aaPredicted RBP3.38□□□□□ -1.87
EFCAB11-213ENST00000557685 KRT6CP48668 564 aa3.38□□□□□ -1.87
EFCAB11-213ENST00000557685 TRPC1P48995 793 aa3.38□□□□□ -1.87
EFCAB11-213ENST00000557685 CSRP3P50461 194 aa3.38□□□□□ -1.87
EFCAB11-213ENST00000557685 RPS6P62753 249 aaKnown RBP3.38□□□□□ -1.87
EFCAB11-213ENST00000557685 TRIP10Q15642 601 aa3.38□□□□□ -1.87
EFCAB11-213ENST00000557685 UBE2V2Q15819 145 aa3.38□□□□□ -1.87
EFCAB11-213ENST00000557685 DNAJC21Q5F1R6 531 aaKnown RBP3.38□□□□□ -1.87
EFCAB11-213ENST00000557685 TCTEX1D4Q5JR98 221 aa3.38□□□□□ -1.87
EFCAB11-213ENST00000557685 SLC39A4Q6P5W5 647 aa3.38□□□□□ -1.87
EFCAB11-213ENST00000557685 CENPUQ71F23 418 aa3.38□□□□□ -1.87
EFCAB11-213ENST00000557685 PRSS48Q7RTY5 328 aa3.38□□□□□ -1.87
EFCAB11-213ENST00000557685 ZNF573Q86YE8 665 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms