RNA–Protein interactions for RNA: ENST00000557529.1

SHMT2-233, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,369 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-233ENST00000557529 TCTN3Q6NUS6 607 aa11.61□□□□□ -0.55
SHMT2-233ENST00000557529 DEF8Q6ZN54 512 aa11.61□□□□□ -0.55
SHMT2-233ENST00000557529 PPP1R3BQ86XI6 285 aa11.61□□□□□ -0.55
SHMT2-233ENST00000557529 TMEM151BQ8IW70 566 aa11.61□□□□□ -0.55
SHMT2-233ENST00000557529 TAGAPQ8N103 731 aa11.61□□□□□ -0.55
SHMT2-233ENST00000557529 AGBL5Q8NDL9 886 aa11.61□□□□□ -0.55
SHMT2-233ENST00000557529 OR10G2Q8NGC3 310 aa11.61□□□□□ -0.55
SHMT2-233ENST00000557529 ART5Q96L15 291 aa11.61□□□□□ -0.55
SHMT2-233ENST00000557529 DHRS1Q96LJ7 313 aa11.61□□□□□ -0.55
SHMT2-233ENST00000557529 VSTM2LQ96N03 204 aa11.61□□□□□ -0.55
SHMT2-233ENST00000557529 MBOAT4Q96T53 435 aa11.61□□□□□ -0.55
SHMT2-233ENST00000557529 BARD1Q99728 777 aaKnown RBP11.61□□□□□ -0.55
SHMT2-233ENST00000557529 ARHGDIGQ99819 225 aa11.61□□□□□ -0.55
SHMT2-233ENST00000557529 RSPO3Q9BXY4 272 aaPredicted RBP11.61□□□□□ -0.55
SHMT2-233ENST00000557529 TGIF2Q9GZN2 237 aa11.61□□□□□ -0.55
SHMT2-233ENST00000557529 OR10A5Q9H207 317 aa11.61□□□□□ -0.55
SHMT2-233ENST00000557529 EVA1AQ9H8M9 152 aa11.61□□□□□ -0.55
SHMT2-233ENST00000557529 Q9N2J8 555 aa11.61□□□□□ -0.55
SHMT2-233ENST00000557529 PNO1Q9NRX1 252 aaKnown RBP11.61□□□□□ -0.55
SHMT2-233ENST00000557529 KRT84Q9NSB2 600 aa11.61□□□□□ -0.55
SHMT2-233ENST00000557529 FAM118AQ9NWS6 357 aa11.61□□□□□ -0.55
SHMT2-233ENST00000557529 MKLN1Q9UL63 735 aa11.61□□□□□ -0.55
SHMT2-233ENST00000557529 TMCC3Q9ULS5 477 aa11.61□□□□□ -0.55
SHMT2-233ENST00000557529 ERVK-19Q9WJR5 959 aa11.61□□□□□ -0.55
SHMT2-233ENST00000557529 CFL2Q9Y281 166 aa11.61□□□□□ -0.55
SHMT2-233ENST00000557529 ZNF443Q9Y2A4 671 aaPredicted RBP11.61□□□□□ -0.55
SHMT2-233ENST00000557529 PCDHGA8Q9Y5G5 932 aa11.61□□□□□ -0.55
SHMT2-233ENST00000557529 R4GN57 208 aa11.61□□□□□ -0.55
SHMT2-233ENST00000557529 ADAMTS20P59510 1910 aa11.61□□□□□ -0.55
SHMT2-233ENST00000557529 IGLV3-12A0A075B6K2 115 aa11.6□□□□□ -0.55
SHMT2-233ENST00000557529 TCRBV16S1A1N1A0A5B0 115 aa11.6□□□□□ -0.55
SHMT2-233ENST00000557529 LNP1A1A4G5 178 aa11.6□□□□□ -0.55
SHMT2-233ENST00000557529 OR2W5A6NFC9 320 aa11.6□□□□□ -0.55
SHMT2-233ENST00000557529 C17orf105B2RV13 164 aa11.6□□□□□ -0.55
SHMT2-233ENST00000557529 J3KTA2 159 aa11.6□□□□□ -0.55
SHMT2-233ENST00000557529 M0R3H8 397 aa11.6□□□□□ -0.55
SHMT2-233ENST00000557529 SLC16A6O15403 523 aa11.6□□□□□ -0.55
SHMT2-233ENST00000557529 KIAA0513O60268 411 aa11.6□□□□□ -0.55
SHMT2-233ENST00000557529 BRINP1O60477 761 aa11.6□□□□□ -0.55
SHMT2-233ENST00000557529 UGT2B11O75310 529 aa11.6□□□□□ -0.55
SHMT2-233ENST00000557529 CCNB2O95067 398 aa11.6□□□□□ -0.55
SHMT2-233ENST00000557529 ZIC2O95409 532 aaPredicted RBP11.6□□□□□ -0.55
SHMT2-233ENST00000557529 ONECUT2O95948 504 aa11.6□□□□□ -0.55
SHMT2-233ENST00000557529 H1F0P07305 194 aaKnown RBP11.6□□□□□ -0.55
SHMT2-233ENST00000557529 FGF5P12034 268 aa11.6□□□□□ -0.55
SHMT2-233ENST00000557529 IL7RP16871 459 aa11.6□□□□□ -0.55
SHMT2-233ENST00000557529 RPS4Y1P22090 263 aaKnown RBP11.6□□□□□ -0.55
SHMT2-233ENST00000557529 IFNA8P32881 189 aa11.6□□□□□ -0.55
SHMT2-233ENST00000557529 TRHRP34981 398 aaPredicted RBP11.6□□□□□ -0.55
SHMT2-233ENST00000557529 RORAP35398 523 aa11.6□□□□□ -0.55
SHMT2-233ENST00000557529 DAPP51397 102 aa11.6□□□□□ -0.55
SHMT2-233ENST00000557529 MYBPC1Q00872 1141 aa11.6□□□□□ -0.55
SHMT2-233ENST00000557529 PSG6Q00889 435 aa11.6□□□□□ -0.55
SHMT2-233ENST00000557529 OCA2Q04671 838 aa11.6□□□□□ -0.55
SHMT2-233ENST00000557529 ZFP36L1Q07352 338 aaKnown RBP11.6□□□□□ -0.55
SHMT2-233ENST00000557529 KCNAB2Q13303 367 aa11.6□□□□□ -0.55
SHMT2-233ENST00000557529 ELAVL1Q15717 326 aaKnown RBP11.6□□□□□ -0.55
SHMT2-233ENST00000557529 NKAIN1Q4KMZ8 207 aa11.6□□□□□ -0.55
SHMT2-233ENST00000557529 CCNJQ5T5M9 372 aa11.6□□□□□ -0.55
SHMT2-233ENST00000557529 VRK2Q86Y07 508 aa11.6□□□□□ -0.55
SHMT2-233ENST00000557529 PLPP5Q8NEB5 264 aa11.6□□□□□ -0.55
SHMT2-233ENST00000557529 OR52J3Q8NH60 311 aa11.6□□□□□ -0.55
SHMT2-233ENST00000557529 OR14A16Q8NHC5 309 aa11.6□□□□□ -0.55
SHMT2-233ENST00000557529 RHBDD1Q8TEB9 315 aa11.6□□□□□ -0.55
SHMT2-233ENST00000557529 PIK3R3Q92569 461 aa11.6□□□□□ -0.55
SHMT2-233ENST00000557529 TSLPQ969D9 159 aa11.6□□□□□ -0.55
SHMT2-233ENST00000557529 CLIP3Q96DZ5 547 aa11.6□□□□□ -0.55
SHMT2-233ENST00000557529 FBXL20Q96IG2 436 aa11.6□□□□□ -0.55
SHMT2-233ENST00000557529 PRRC1Q96M27 445 aa11.6□□□□□ -0.55
SHMT2-233ENST00000557529 ALPK1Q96QP1 1244 aa11.6□□□□□ -0.55
SHMT2-233ENST00000557529 QRSL1Q9H0R6 528 aaKnown RBP11.6□□□□□ -0.55
SHMT2-233ENST00000557529 ARMC7Q9H6L4 198 aa11.6□□□□□ -0.55
SHMT2-233ENST00000557529 ZNF696Q9H7X3 374 aa11.6□□□□□ -0.55
SHMT2-233ENST00000557529 NMNAT1Q9HAN9 279 aaPredicted RBP11.6□□□□□ -0.55
SHMT2-233ENST00000557529 C14orf105Q9NVL8 296 aa11.6□□□□□ -0.55
SHMT2-233ENST00000557529 ENOPH1Q9UHY7 261 aa11.6□□□□□ -0.55
SHMT2-233ENST00000557529 HCN4Q9Y3Q4 1203 aa11.6□□□□□ -0.55
SHMT2-233ENST00000557529 GXYLT2A0PJZ3 443 aa11.59□□□□□ -0.55
SHMT2-233ENST00000557529 EFCAB7A8K855 629 aa11.59□□□□□ -0.55
SHMT2-233ENST00000557529 HRKO00198 91 aa11.59□□□□□ -0.55
SHMT2-233ENST00000557529 FAAHO00519 579 aa11.59□□□□□ -0.55
SHMT2-233ENST00000557529 FFAR1O14842 300 aa11.59□□□□□ -0.55
SHMT2-233ENST00000557529 UGT2B17O75795 530 aa11.59□□□□□ -0.55
SHMT2-233ENST00000557529 KCNK2O95069 426 aa11.59□□□□□ -0.55
SHMT2-233ENST00000557529 OXSR1O95747 527 aaPredicted RBP11.59□□□□□ -0.55
SHMT2-233ENST00000557529 EPPINO95925 133 aa11.59□□□□□ -0.55
SHMT2-233ENST00000557529 GNAO1P09471 354 aa11.59□□□□□ -0.55
SHMT2-233ENST00000557529 ATXN8OSP0DMR3 200 aa11.59□□□□□ -0.55
SHMT2-233ENST00000557529 TPD52P55327 224 aaPredicted RBP11.59□□□□□ -0.55
SHMT2-233ENST00000557529 DCDP81605 110 aaKnown RBP11.59□□□□□ -0.55
SHMT2-233ENST00000557529 GANABQ14697 944 aaKnown RBP11.59□□□□□ -0.55
SHMT2-233ENST00000557529 NSDHLQ15738 373 aa11.59□□□□□ -0.55
SHMT2-233ENST00000557529 GPR68Q15743 365 aa11.59□□□□□ -0.55
SHMT2-233ENST00000557529 ZSWIM7Q19AV6 140 aa11.59□□□□□ -0.55
SHMT2-233ENST00000557529 VWA2Q5GFL6 755 aa11.59□□□□□ -0.55
SHMT2-233ENST00000557529 ANKRD34AQ69YU3 496 aa11.59□□□□□ -0.55
SHMT2-233ENST00000557529 PWWP2BQ6NUJ5 590 aa11.59□□□□□ -0.55
SHMT2-233ENST00000557529 COMTD1Q86VU5 262 aa11.59□□□□□ -0.55
SHMT2-233ENST00000557529 LACC1Q8IV20 430 aa11.59□□□□□ -0.55
SHMT2-233ENST00000557529 C8orf59Q8N0T1 100 aaPredicted RBP11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms