RNA–Protein interactions for RNA: ENST00000557470.5

VPS33B-207, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 5

Gene VPS33B, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-207ENST00000557470 MILR1Q7Z6M3 343 aa5.32□□□□□ -1.56
VPS33B-207ENST00000557470 PHC2Q8IXK0 858 aa5.32□□□□□ -1.56
VPS33B-207ENST00000557470 DND1Q8IYX4 353 aaKnown RBP5.32□□□□□ -1.56
VPS33B-207ENST00000557470 GCNT2Q8N0V5 402 aa5.32□□□□□ -1.56
VPS33B-207ENST00000557470 NAT8LQ8N9F0 302 aa5.32□□□□□ -1.56
VPS33B-207ENST00000557470 ACOT4Q8N9L9 421 aa5.32□□□□□ -1.56
VPS33B-207ENST00000557470 PPP1R14CQ8TAE6 165 aa5.32□□□□□ -1.56
VPS33B-207ENST00000557470 FBLIM1Q8WUP2 373 aa5.32□□□□□ -1.56
VPS33B-207ENST00000557470 MAIP1Q8WWC4 291 aa5.32□□□□□ -1.56
VPS33B-207ENST00000557470 SLC44A1Q8WWI5 657 aa5.32□□□□□ -1.56
VPS33B-207ENST00000557470 ABTB1Q969K4 478 aaPredicted RBP5.32□□□□□ -1.56
VPS33B-207ENST00000557470 RHBDF1Q96CC6 855 aa5.32□□□□□ -1.56
VPS33B-207ENST00000557470 PDLIM5Q96HC4 596 aaKnown RBP5.32□□□□□ -1.56
VPS33B-207ENST00000557470 FBXL20Q96IG2 436 aa5.32□□□□□ -1.56
VPS33B-207ENST00000557470 RAX2Q96IS3 184 aa5.32□□□□□ -1.56
VPS33B-207ENST00000557470 GNRHR2Q96P88 292 aa5.32□□□□□ -1.56
VPS33B-207ENST00000557470 DGAT2Q96PD7 388 aa5.32□□□□□ -1.56
VPS33B-207ENST00000557470 KCNC2Q96PR1 638 aa5.32□□□□□ -1.56
VPS33B-207ENST00000557470 EGFL8Q99944 293 aa5.32□□□□□ -1.56
VPS33B-207ENST00000557470 PIGQQ9BRB3 760 aa5.32□□□□□ -1.56
VPS33B-207ENST00000557470 SFXN3Q9BWM7 321 aa5.32□□□□□ -1.56
VPS33B-207ENST00000557470 PITHD1Q9GZP4 211 aaPredicted RBP5.32□□□□□ -1.56
VPS33B-207ENST00000557470 WWTR1Q9GZV5 400 aa5.32□□□□□ -1.56
VPS33B-207ENST00000557470 NT5DC2Q9H857 520 aa5.32□□□□□ -1.56
VPS33B-207ENST00000557470 UBTD1Q9HAC8 227 aa5.32□□□□□ -1.56
VPS33B-207ENST00000557470 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.32□□□□□ -1.56
VPS33B-207ENST00000557470 TEX10Q9NXF1 929 aaPredicted RBP5.32□□□□□ -1.56
VPS33B-207ENST00000557470 ZNF490Q9ULM2 529 aaPredicted RBP5.32□□□□□ -1.56
VPS33B-207ENST00000557470 C15orf41Q9Y2V0 281 aa5.32□□□□□ -1.56
VPS33B-207ENST00000557470 VWA7Q9Y334 891 aa5.32□□□□□ -1.56
VPS33B-207ENST00000557470 ROS1P08922 2347 aa5.31□□□□□ -1.56
VPS33B-207ENST00000557470 IQANK1A0A1B0GTG1 560 aa5.31□□□□□ -1.56
VPS33B-207ENST00000557470 NCF1BA6NI72 391 aaPredicted RBP5.31□□□□□ -1.56
VPS33B-207ENST00000557470 NCF1CA8MVU1 366 aaPredicted RBP5.31□□□□□ -1.56
VPS33B-207ENST00000557470 TP53I11O14683 189 aa5.31□□□□□ -1.56
VPS33B-207ENST00000557470 CTIFO43310 598 aaKnown RBP5.31□□□□□ -1.56
VPS33B-207ENST00000557470 SH3BGRLO75368 114 aa5.31□□□□□ -1.56
VPS33B-207ENST00000557470 PRKRAO75569 313 aaKnown RBP5.31□□□□□ -1.56
VPS33B-207ENST00000557470 SCELO95171 688 aa5.31□□□□□ -1.56
VPS33B-207ENST00000557470 CLPSP04118 112 aa5.31□□□□□ -1.56
VPS33B-207ENST00000557470 F13BP05160 661 aa5.31□□□□□ -1.56
VPS33B-207ENST00000557470 CYP4B1P13584 511 aa5.31□□□□□ -1.56
VPS33B-207ENST00000557470 NCF1P14598 390 aaPredicted RBP5.31□□□□□ -1.56
VPS33B-207ENST00000557470 STMN1P16949 149 aa5.31□□□□□ -1.56
VPS33B-207ENST00000557470 HIST1H1TP22492 207 aaPredicted RBP5.31□□□□□ -1.56
VPS33B-207ENST00000557470 CPN2P22792 545 aa5.31□□□□□ -1.56
VPS33B-207ENST00000557470 CASQ1P31415 396 aa5.31□□□□□ -1.56
VPS33B-207ENST00000557470 CCKARP32238 428 aa5.31□□□□□ -1.56
VPS33B-207ENST00000557470 CXCR5P32302 372 aa5.31□□□□□ -1.56
VPS33B-207ENST00000557470 CPOXP36551 454 aa5.31□□□□□ -1.56
VPS33B-207ENST00000557470 RPL21P46778 160 aaKnown RBP5.31□□□□□ -1.56
VPS33B-207ENST00000557470 PTH2RP49190 550 aa5.31□□□□□ -1.56
VPS33B-207ENST00000557470 HNMTP50135 292 aa5.31□□□□□ -1.56
VPS33B-207ENST00000557470 SLC37A1P57057 533 aa5.31□□□□□ -1.56
VPS33B-207ENST00000557470 FBXW4P57775 412 aa5.31□□□□□ -1.56
VPS33B-207ENST00000557470 RAB1AP62820 205 aa5.31□□□□□ -1.56
VPS33B-207ENST00000557470 HERVK_113P63132 956 aa5.31□□□□□ -1.56
VPS33B-207ENST00000557470 ERVK-8P63133 956 aa5.31□□□□□ -1.56
VPS33B-207ENST00000557470 TGM3Q08188 693 aa5.31□□□□□ -1.56
VPS33B-207ENST00000557470 EFR3AQ14156 821 aa5.31□□□□□ -1.56
VPS33B-207ENST00000557470 DOC2AQ14183 400 aa5.31□□□□□ -1.56
VPS33B-207ENST00000557470 RCAN2Q14206 197 aa5.31□□□□□ -1.56
VPS33B-207ENST00000557470 TSNQ15631 228 aaKnown RBP5.31□□□□□ -1.56
VPS33B-207ENST00000557470 ACKR1Q16570 336 aa5.31□□□□□ -1.56
VPS33B-207ENST00000557470 FBXO48Q5FWF7 155 aa5.31□□□□□ -1.56
VPS33B-207ENST00000557470 HP1BP3Q5SSJ5 553 aaPredicted RBP5.31□□□□□ -1.56
VPS33B-207ENST00000557470 TEDDM1Q5T9Z0 273 aa5.31□□□□□ -1.56
VPS33B-207ENST00000557470 FAM45BPQ6NSW5 357 aa5.31□□□□□ -1.56
VPS33B-207ENST00000557470 RNF111Q6ZNA4 994 aa5.31□□□□□ -1.56
VPS33B-207ENST00000557470 FRA10AC1Q70Z53 315 aa5.31□□□□□ -1.56
VPS33B-207ENST00000557470 SLC29A4Q7RTT9 530 aa5.31□□□□□ -1.56
VPS33B-207ENST00000557470 GALNT7Q86SF2 657 aa5.31□□□□□ -1.56
VPS33B-207ENST00000557470 ADGRE4PQ86SQ3 457 aa5.31□□□□□ -1.56
VPS33B-207ENST00000557470 ANKRD13BQ86YJ7 626 aa5.31□□□□□ -1.56
VPS33B-207ENST00000557470 IGDCC3Q8IVU1 814 aa5.31□□□□□ -1.56
VPS33B-207ENST00000557470 ZNF441Q8N8Z8 693 aa5.31□□□□□ -1.56
VPS33B-207ENST00000557470 BBOF1Q8ND07 529 aa5.31□□□□□ -1.56
VPS33B-207ENST00000557470 FAM83FQ8NEG4 500 aaPredicted RBP5.31□□□□□ -1.56
VPS33B-207ENST00000557470 OR10H5Q8NGA6 315 aa5.31□□□□□ -1.56
VPS33B-207ENST00000557470 FAM45AQ8TCE6 357 aa5.31□□□□□ -1.56
VPS33B-207ENST00000557470 SPPL2AQ8TCT8 520 aa5.31□□□□□ -1.56
VPS33B-207ENST00000557470 ZPLD1Q8TCW7 415 aa5.31□□□□□ -1.56
VPS33B-207ENST00000557470 ANKRD49Q8WVL7 239 aa5.31□□□□□ -1.56
VPS33B-207ENST00000557470 INTS12Q96CB8 462 aaKnown RBP5.31□□□□□ -1.56
VPS33B-207ENST00000557470 NTNG2Q96CW9 530 aa5.31□□□□□ -1.56
VPS33B-207ENST00000557470 PTCD3Q96EY7 689 aaKnown RBP5.31□□□□□ -1.56
VPS33B-207ENST00000557470 PIK3IP1Q96FE7 263 aa5.31□□□□□ -1.56
VPS33B-207ENST00000557470 CERS2Q96G23 380 aa5.31□□□□□ -1.56
VPS33B-207ENST00000557470 RBM18Q96H35 190 aaKnown RBP5.31□□□□□ -1.56
VPS33B-207ENST00000557470 ART5Q96L15 291 aa5.31□□□□□ -1.56
VPS33B-207ENST00000557470 ZFP3Q96NJ6 502 aa5.31□□□□□ -1.56
VPS33B-207ENST00000557470 WFIKKN1Q96NZ8 548 aa5.31□□□□□ -1.56
VPS33B-207ENST00000557470 TUBA1CQ9BQE3 449 aa5.31□□□□□ -1.56
VPS33B-207ENST00000557470 TMEM79Q9BSE2 394 aa5.31□□□□□ -1.56
VPS33B-207ENST00000557470 TBCDQ9BTW9 1192 aa5.31□□□□□ -1.56
VPS33B-207ENST00000557470 G6PC3Q9BUM1 346 aa5.31□□□□□ -1.56
VPS33B-207ENST00000557470 ERVK-6Q9BXR3 956 aa5.31□□□□□ -1.56
VPS33B-207ENST00000557470 ANGPTL4Q9BY76 406 aa5.31□□□□□ -1.56
VPS33B-207ENST00000557470 ROGDIQ9GZN7 287 aa5.31□□□□□ -1.56
VPS33B-207ENST00000557470 EHD1Q9H4M9 534 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms