RNA–Protein interactions for RNA: ENST00000557352.1

VRK1-207, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-207ENST00000557352 IGSF9BQ9UPX0 1349 aa2.85□□□□□ -1.95
VRK1-207ENST00000557352 MICAL3Q7RTP6 2002 aa2.85□□□□□ -1.95
VRK1-207ENST00000557352 NLRC5Q86WI3 1866 aa2.84□□□□□ -1.95
VRK1-207ENST00000557352 ZNF638Q14966 1978 aaKnown RBP2.84□□□□□ -1.95
VRK1-207ENST00000557352 TMEM129A0AVI4 362 aa2.84□□□□□ -1.95
VRK1-207ENST00000557352 BICDL2A1A5D9 508 aa2.84□□□□□ -1.95
VRK1-207ENST00000557352 GOLGA6L19H0YKK7 550 aa2.84□□□□□ -1.95
VRK1-207ENST00000557352 PSMA7O14818 248 aa2.84□□□□□ -1.95
VRK1-207ENST00000557352 TSC22D2O75157 780 aa2.84□□□□□ -1.95
VRK1-207ENST00000557352 RHBDL1O75783 438 aa2.84□□□□□ -1.95
VRK1-207ENST00000557352 CNMDO75829 334 aa2.84□□□□□ -1.95
VRK1-207ENST00000557352 HSPA4LO95757 839 aa2.84□□□□□ -1.95
VRK1-207ENST00000557352 IGHG3P01860 377 aa2.84□□□□□ -1.95
VRK1-207ENST00000557352 RPN1P04843 607 aaKnown RBP2.84□□□□□ -1.95
VRK1-207ENST00000557352 DLATP10515 647 aaKnown RBP2.84□□□□□ -1.95
VRK1-207ENST00000557352 GAP43P17677 238 aa2.84□□□□□ -1.95
VRK1-207ENST00000557352 CCNE1P24864 410 aa2.84□□□□□ -1.95
VRK1-207ENST00000557352 GP5P40197 560 aa2.84□□□□□ -1.95
VRK1-207ENST00000557352 CCT6AP40227 531 aaKnown RBP2.84□□□□□ -1.95
VRK1-207ENST00000557352 SLC1A3P43003 542 aa2.84□□□□□ -1.95
VRK1-207ENST00000557352 MEOX2P50222 304 aa2.84□□□□□ -1.95
VRK1-207ENST00000557352 SLC26A2P50443 739 aa2.84□□□□□ -1.95
VRK1-207ENST00000557352 SNRPFP62306 86 aaKnown RBP2.84□□□□□ -1.95
VRK1-207ENST00000557352 LRRC63Q05C16 580 aa2.84□□□□□ -1.95
VRK1-207ENST00000557352 KARSQ15046 597 aaKnown RBP2.84□□□□□ -1.95
VRK1-207ENST00000557352 STXBP2Q15833 593 aa2.84□□□□□ -1.95
VRK1-207ENST00000557352 UGCGQ16739 394 aa2.84□□□□□ -1.95
VRK1-207ENST00000557352 ZCWPW2Q504Y3 356 aa2.84□□□□□ -1.95
VRK1-207ENST00000557352 CST9Q5W186 159 aa2.84□□□□□ -1.95
VRK1-207ENST00000557352 CENPPQ6IPU0 288 aa2.84□□□□□ -1.95
VRK1-207ENST00000557352 KLHL10Q6JEL2 608 aa2.84□□□□□ -1.95
VRK1-207ENST00000557352 RFPL4BQ6ZWI9 263 aa2.84□□□□□ -1.95
VRK1-207ENST00000557352 CCDC65Q8IXS2 484 aa2.84□□□□□ -1.95
VRK1-207ENST00000557352 C4orf19Q8IY42 314 aa2.84□□□□□ -1.95
VRK1-207ENST00000557352 TIGD4Q8IY51 512 aa2.84□□□□□ -1.95
VRK1-207ENST00000557352 SLC43A2Q8N370 569 aa2.84□□□□□ -1.95
VRK1-207ENST00000557352 AFAP1L1Q8TED9 768 aa2.84□□□□□ -1.95
VRK1-207ENST00000557352 ATP6V0A1Q93050 837 aa2.84□□□□□ -1.95
VRK1-207ENST00000557352 TSSK2Q96PF2 358 aa2.84□□□□□ -1.95
VRK1-207ENST00000557352 SIGLEC12Q96PQ1 595 aa2.84□□□□□ -1.95
VRK1-207ENST00000557352 FAM129AQ9BZQ8 928 aa2.84□□□□□ -1.95
VRK1-207ENST00000557352 HSD3B7Q9H2F3 369 aa2.84□□□□□ -1.95
VRK1-207ENST00000557352 RAB9BQ9NP90 201 aa2.84□□□□□ -1.95
VRK1-207ENST00000557352 VNN3Q9NY84 501 aa2.84□□□□□ -1.95
VRK1-207ENST00000557352 CGNQ9P2M7 1197 aaKnown RBP2.84□□□□□ -1.95
VRK1-207ENST00000557352 ASTN1O14525 1302 aa2.84□□□□□ -1.96
VRK1-207ENST00000557352 PHLPP2Q6ZVD8 1323 aa2.84□□□□□ -1.96
VRK1-207ENST00000557352 SYNRGQ9UMZ2 1314 aa2.84□□□□□ -1.96
VRK1-207ENST00000557352 DNAH12Q6ZR08 3092 aa2.83□□□□□ -1.96
VRK1-207ENST00000557352 HTTP42858 3142 aa2.83□□□□□ -1.96
VRK1-207ENST00000557352 CCL15-CCL14A0A0B4J2E2 113 aa2.83□□□□□ -1.96
VRK1-207ENST00000557352 HTR3EA5X5Y0 456 aa2.83□□□□□ -1.96
VRK1-207ENST00000557352 SLC15A5A6NIM6 579 aa2.83□□□□□ -1.96
VRK1-207ENST00000557352 PP2D1A8MPX8 630 aa2.83□□□□□ -1.96
VRK1-207ENST00000557352 ZNF487B1APH4 448 aa2.83□□□□□ -1.96
VRK1-207ENST00000557352 H0YCG3 227 aa2.83□□□□□ -1.96
VRK1-207ENST00000557352 PDXKO00764 312 aa2.83□□□□□ -1.96
VRK1-207ENST00000557352 MAPK13O15264 365 aa2.83□□□□□ -1.96
VRK1-207ENST00000557352 FLRT2O43155 660 aa2.83□□□□□ -1.96
VRK1-207ENST00000557352 LRRTM2O43300 516 aa2.83□□□□□ -1.96
VRK1-207ENST00000557352 SLITRK3O94933 977 aa2.83□□□□□ -1.96
VRK1-207ENST00000557352 ADCY5O95622 1261 aa2.83□□□□□ -1.96
VRK1-207ENST00000557352 FGFR1OPO95684 399 aaKnown RBP2.83□□□□□ -1.96
VRK1-207ENST00000557352 GNA14O95837 355 aa2.83□□□□□ -1.96
VRK1-207ENST00000557352 MOCS2O96007 188 aaPredicted RBP2.83□□□□□ -1.96
VRK1-207ENST00000557352 VIMP08670 466 aaKnown RBP2.83□□□□□ -1.96
VRK1-207ENST00000557352 SP9P0CG40 484 aa2.83□□□□□ -1.96
VRK1-207ENST00000557352 QARSP47897 775 aaKnown RBP2.83□□□□□ -1.96
VRK1-207ENST00000557352 NPY4RP50391 375 aa2.83□□□□□ -1.96
VRK1-207ENST00000557352 SNAP25P60880 206 aa2.83□□□□□ -1.96
VRK1-207ENST00000557352 PSMC5P62195 406 aa2.83□□□□□ -1.96
VRK1-207ENST00000557352 ASIC1P78348 528 aa2.83□□□□□ -1.96
VRK1-207ENST00000557352 ITGB3BPQ13352 177 aaPredicted RBP2.83□□□□□ -1.96
VRK1-207ENST00000557352 GIT2Q14161 759 aa2.83□□□□□ -1.96
VRK1-207ENST00000557352 CRMP1Q14194 572 aa2.83□□□□□ -1.96
VRK1-207ENST00000557352 CCL15Q16663 113 aa2.83□□□□□ -1.96
VRK1-207ENST00000557352 C17orf58Q2M2W7 97 aa2.83□□□□□ -1.96
VRK1-207ENST00000557352 FAM46CQ5VWP2 391 aa2.83□□□□□ -1.96
VRK1-207ENST00000557352 PLPP4Q5VZY2 271 aa2.83□□□□□ -1.96
VRK1-207ENST00000557352 IGFL3Q6UXB1 125 aa2.83□□□□□ -1.96
VRK1-207ENST00000557352 C1orf186Q6ZWK4 172 aa2.83□□□□□ -1.96
VRK1-207ENST00000557352 APTXQ7Z2E3 356 aaKnown RBP2.83□□□□□ -1.96
VRK1-207ENST00000557352 DNAJB7Q7Z6W7 309 aaPredicted RBP2.83□□□□□ -1.96
VRK1-207ENST00000557352 ABI3BPQ7Z7G0 1075 aa2.83□□□□□ -1.96
VRK1-207ENST00000557352 LUZP1Q86V48 1076 aa2.83□□□□□ -1.96
VRK1-207ENST00000557352 C12orf56Q8IXR9 622 aa2.83□□□□□ -1.96
VRK1-207ENST00000557352 ZNF525Q8N782 197 aa2.83□□□□□ -1.96
VRK1-207ENST00000557352 KIAA0895Q8NCT3 520 aa2.83□□□□□ -1.96
VRK1-207ENST00000557352 ANKRD20A12PQ8NF67 263 aa2.83□□□□□ -1.96
VRK1-207ENST00000557352 Q8NFD4 153 aa2.83□□□□□ -1.96
VRK1-207ENST00000557352 GOLGA5Q8TBA6 731 aa2.83□□□□□ -1.96
VRK1-207ENST00000557352 TAAR1Q96RJ0 339 aa2.83□□□□□ -1.96
VRK1-207ENST00000557352 LXNQ9BS40 222 aa2.83□□□□□ -1.96
VRK1-207ENST00000557352 THAP9Q9H5L6 903 aa2.83□□□□□ -1.96
VRK1-207ENST00000557352 TRAF3IP3Q9Y228 551 aa2.83□□□□□ -1.96
VRK1-207ENST00000557352 PATJQ8NI35 1801 aa2.83□□□□□ -1.96
VRK1-207ENST00000557352 COL1A2P08123 1366 aa2.83□□□□□ -1.96
VRK1-207ENST00000557352 GREB1Q4ZG55 1949 aa2.83□□□□□ -1.96
VRK1-207ENST00000557352 DENND4CQ5VZ89 1909 aa2.83□□□□□ -1.96
VRK1-207ENST00000557352 CENPFP49454 3210 aa2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms