RNA–Protein interactions for RNA: ENST00000557341.5

SNX6-210, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-210ENST00000557341 C9orf106Q8NAJ2 232 aa12.88□□□□□ -0.35
SNX6-210ENST00000557341 OR7G2Q8NG99 324 aa12.88□□□□□ -0.35
SNX6-210ENST00000557341 RMND5BQ96G75 393 aaPredicted RBP12.88□□□□□ -0.35
SNX6-210ENST00000557341 ZFP3Q96NJ6 502 aa12.88□□□□□ -0.35
SNX6-210ENST00000557341 TUBA1CQ9BQE3 449 aa12.88□□□□□ -0.35
SNX6-210ENST00000557341 MYNNQ9NPC7 610 aa12.88□□□□□ -0.35
SNX6-210ENST00000557341 RASSF1Q9NS23 344 aa12.88□□□□□ -0.35
SNX6-210ENST00000557341 GRID1Q9ULK0 1009 aa12.88□□□□□ -0.35
SNX6-210ENST00000557341 CBLCQ9ULV8 474 aa12.88□□□□□ -0.35
SNX6-210ENST00000557341 NF1P21359 2839 aa12.88□□□□□ -0.35
SNX6-210ENST00000557341 A0A1W2PPM1 405 aa12.87□□□□□ -0.35
SNX6-210ENST00000557341 MYO1GB0I1T2 1018 aa12.87□□□□□ -0.35
SNX6-210ENST00000557341 G3V2L1 256 aa12.87□□□□□ -0.35
SNX6-210ENST00000557341 RSL1D1O76021 490 aaKnown RBP12.87□□□□□ -0.35
SNX6-210ENST00000557341 PROCP04070 461 aa12.87□□□□□ -0.35
SNX6-210ENST00000557341 JUNP05412 331 aaKnown RBP12.87□□□□□ -0.35
SNX6-210ENST00000557341 GRK2P25098 689 aa12.87□□□□□ -0.35
SNX6-210ENST00000557341 NTSP30990 170 aa12.87□□□□□ -0.35
SNX6-210ENST00000557341 MC3RP41968 323 aa12.87□□□□□ -0.35
SNX6-210ENST00000557341 NCBP2P52298 156 aaKnown RBP eCLIP12.87□□□□□ -0.35
SNX6-210ENST00000557341 IST1P53990 364 aa12.87□□□□□ -0.35
SNX6-210ENST00000557341 SORDQ00796 357 aa12.87□□□□□ -0.35
SNX6-210ENST00000557341 SRYQ05066 204 aa12.87□□□□□ -0.35
SNX6-210ENST00000557341 C2orf80Q0P641 193 aa12.87□□□□□ -0.35
SNX6-210ENST00000557341 CFAP157Q5JU67 520 aa12.87□□□□□ -0.35
SNX6-210ENST00000557341 IKBIPQ70UQ0 350 aa12.87□□□□□ -0.35
SNX6-210ENST00000557341 TRIM46Q7Z4K8 759 aa12.87□□□□□ -0.35
SNX6-210ENST00000557341 SLC44A2Q8IWA5 706 aaPredicted RBP12.87□□□□□ -0.35
SNX6-210ENST00000557341 TRIM42Q8IWZ5 723 aa12.87□□□□□ -0.35
SNX6-210ENST00000557341 FAM76AQ8TAV0 307 aa12.87□□□□□ -0.35
SNX6-210ENST00000557341 RNF138Q8WVD3 245 aa12.87□□□□□ -0.35
SNX6-210ENST00000557341 EFHD2Q96C19 240 aaPredicted RBP12.87□□□□□ -0.35
SNX6-210ENST00000557341 SFXN2Q96NB2 322 aa12.87□□□□□ -0.35
SNX6-210ENST00000557341 TM9SF2Q99805 663 aa12.87□□□□□ -0.35
SNX6-210ENST00000557341 SFXN3Q9BWM7 321 aa12.87□□□□□ -0.35
SNX6-210ENST00000557341 PPCSQ9HAB8 311 aa12.87□□□□□ -0.35
SNX6-210ENST00000557341 RRAGDQ9NQL2 400 aaPredicted RBP12.87□□□□□ -0.35
SNX6-210ENST00000557341 FBXL2Q9UKC9 423 aa12.87□□□□□ -0.35
SNX6-210ENST00000557341 POLR3HQ9Y535 204 aaPredicted RBP12.87□□□□□ -0.35
SNX6-210ENST00000557341 ZNF469Q96JG9 3925 aaPredicted RBP12.86□□□□□ -0.35
SNX6-210ENST00000557341 A0A087WV62 115 aa12.86□□□□□ -0.35
SNX6-210ENST00000557341 FAM221AA4D161 298 aa12.86□□□□□ -0.35
SNX6-210ENST00000557341 TUBAL3A6NHL2 446 aa12.86□□□□□ -0.35
SNX6-210ENST00000557341 CLCA1A8K7I4 914 aa12.86□□□□□ -0.35
SNX6-210ENST00000557341 EVI2BP34910 448 aa12.86□□□□□ -0.35
SNX6-210ENST00000557341 SLCO1A2P46721 670 aa12.86□□□□□ -0.35
SNX6-210ENST00000557341 CCT5P48643 541 aa12.86□□□□□ -0.35
SNX6-210ENST00000557341 LHX2P50458 406 aa12.86□□□□□ -0.35
SNX6-210ENST00000557341 AGFG1P52594 562 aaKnown RBP12.86□□□□□ -0.35
SNX6-210ENST00000557341 PSG6Q00889 435 aa12.86□□□□□ -0.35
SNX6-210ENST00000557341 SH2D4BQ5SQS7 431 aa12.86□□□□□ -0.35
SNX6-210ENST00000557341 OR5M10Q6IEU7 315 aa12.86□□□□□ -0.35
SNX6-210ENST00000557341 FAM71E1Q6IPT2 247 aa12.86□□□□□ -0.35
SNX6-210ENST00000557341 TMEM107Q6UX40 140 aa12.86□□□□□ -0.35
SNX6-210ENST00000557341 ADGRE4PQ86SQ3 457 aa12.86□□□□□ -0.35
SNX6-210ENST00000557341 CCDC63Q8NA47 563 aa12.86□□□□□ -0.35
SNX6-210ENST00000557341 OR4K17Q8NGC6 315 aa12.86□□□□□ -0.35
SNX6-210ENST00000557341 OR4N2Q8NGD1 307 aa12.86□□□□□ -0.35
SNX6-210ENST00000557341 GOT1L1Q8NHS2 421 aaPredicted RBP12.86□□□□□ -0.35
SNX6-210ENST00000557341 UBLCP1Q8WVY7 318 aaPredicted RBP12.86□□□□□ -0.35
SNX6-210ENST00000557341 UCN2Q96RP3 112 aa12.86□□□□□ -0.35
SNX6-210ENST00000557341 ACBD3Q9H3P7 528 aa12.86□□□□□ -0.35
SNX6-210ENST00000557341 DDX18Q9NVP1 670 aaKnown RBP12.86□□□□□ -0.35
SNX6-210ENST00000557341 JKAMPQ9P055 326 aa12.86□□□□□ -0.35
SNX6-210ENST00000557341 PPP4R1LQ9P1A2 415 aa12.86□□□□□ -0.35
SNX6-210ENST00000557341 ST6GALNAC2Q9UJ37 374 aa12.86□□□□□ -0.35
SNX6-210ENST00000557341 EDARQ9UNE0 448 aa12.86□□□□□ -0.35
SNX6-210ENST00000557341 WBP11Q9Y2W2 641 aaKnown RBP12.86□□□□□ -0.35
SNX6-210ENST00000557341 MRPS18CQ9Y3D5 142 aaKnown RBP12.86□□□□□ -0.35
SNX6-210ENST00000557341 FLNAP21333 2647 aaKnown RBP12.86□□□□□ -0.35
SNX6-210ENST00000557341 MTORP42345 2549 aa12.86□□□□□ -0.35
SNX6-210ENST00000557341 ABCA4P78363 2273 aa12.85□□□□□ -0.35
SNX6-210ENST00000557341 SCO2O43819 266 aa12.85□□□□□ -0.35
SNX6-210ENST00000557341 PLIN3O60664 434 aa12.85□□□□□ -0.35
SNX6-210ENST00000557341 RCBTB2O95199 551 aa12.85□□□□□ -0.35
SNX6-210ENST00000557341 SHBGP04278 402 aa12.85□□□□□ -0.35
SNX6-210ENST00000557341 UROSP10746 265 aa12.85□□□□□ -0.35
SNX6-210ENST00000557341 ZNF708P17019 499 aa12.85□□□□□ -0.35
SNX6-210ENST00000557341 CHMP24386 653 aa12.85□□□□□ -0.35
SNX6-210ENST00000557341 DPP4P27487 766 aa12.85□□□□□ -0.35
SNX6-210ENST00000557341 CPA2P48052 419 aa12.85□□□□□ -0.35
SNX6-210ENST00000557341 GAS1P54826 345 aa12.85□□□□□ -0.35
SNX6-210ENST00000557341 DSCR4P56555 118 aaPredicted RBP12.85□□□□□ -0.35
SNX6-210ENST00000557341 DNAJB13P59910 316 aa12.85□□□□□ -0.35
SNX6-210ENST00000557341 GANABQ14697 944 aaKnown RBP12.85□□□□□ -0.35
SNX6-210ENST00000557341 ZNHIT3Q15649 155 aaPredicted RBP12.85□□□□□ -0.35
SNX6-210ENST00000557341 CYP27C1Q4G0S4 372 aa12.85□□□□□ -0.35
SNX6-210ENST00000557341 FBXW10Q5XX13 1052 aa12.85□□□□□ -0.35
SNX6-210ENST00000557341 NOXRED1Q6NXP6 359 aa12.85□□□□□ -0.35
SNX6-210ENST00000557341 SH2D5Q6ZV89 423 aa12.85□□□□□ -0.35
SNX6-210ENST00000557341 TDRPQ86YL5 185 aa12.85□□□□□ -0.35
SNX6-210ENST00000557341 GRAMD2AQ8IUY3 354 aa12.85□□□□□ -0.35
SNX6-210ENST00000557341 EIF1ADQ8N9N8 165 aaKnown RBP12.85□□□□□ -0.35
SNX6-210ENST00000557341 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.85□□□□□ -0.35
SNX6-210ENST00000557341 WNT2BQ93097 391 aa12.85□□□□□ -0.35
SNX6-210ENST00000557341 METTL2AQ96IZ6 378 aaKnown RBP12.85□□□□□ -0.35
SNX6-210ENST00000557341 FOXC2Q99958 501 aa12.85□□□□□ -0.35
SNX6-210ENST00000557341 Q9N2J8 555 aa12.85□□□□□ -0.35
SNX6-210ENST00000557341 TAS2R7Q9NYW3 318 aa12.85□□□□□ -0.35
SNX6-210ENST00000557341 CLCF1Q9UBD9 225 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms