RNA–Protein interactions for RNA: ENST00000556992.1

SRP54-212, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-212ENST00000556992 CPNE7Q9UBL6 633 aa4.19□□□□□ -1.74
SRP54-212ENST00000556992 PADI4Q9UM07 663 aa4.19□□□□□ -1.74
SRP54-212ENST00000556992 DUSP12Q9UNI6 340 aa4.19□□□□□ -1.74
SRP54-212ENST00000556992 USP22Q9UPT9 525 aa4.19□□□□□ -1.74
SRP54-212ENST00000556992 ERVK-11Q9UQG0 969 aa4.19□□□□□ -1.74
SRP54-212ENST00000556992 CA5BQ9Y2D0 317 aa4.19□□□□□ -1.74
SRP54-212ENST00000556992 PCDHGB3Q9Y5G1 929 aa4.19□□□□□ -1.74
SRP54-212ENST00000556992 KLK4Q9Y5K2 254 aa4.19□□□□□ -1.74
SRP54-212ENST00000556992 ORC6Q9Y5N6 252 aa4.19□□□□□ -1.74
SRP54-212ENST00000556992 AP4B1Q9Y6B7 739 aa4.19□□□□□ -1.74
SRP54-212ENST00000556992 DOCK4Q8N1I0 1966 aa4.19□□□□□ -1.74
SRP54-212ENST00000556992 BPTFQ12830 3046 aa4.19□□□□□ -1.74
SRP54-212ENST00000556992 NCOR2Q9Y618 2525 aa4.19□□□□□ -1.74
SRP54-212ENST00000556992 A0A0A6YYD5 115 aa4.18□□□□□ -1.74
SRP54-212ENST00000556992 IGKV1-8A0A0C4DH67 115 aa4.18□□□□□ -1.74
SRP54-212ENST00000556992 PRAMEF33A0A0G2JMD5 474 aa4.18□□□□□ -1.74
SRP54-212ENST00000556992 TMEM247A6NEH6 219 aa4.18□□□□□ -1.74
SRP54-212ENST00000556992 C5orf58C9J3I9 102 aa4.18□□□□□ -1.74
SRP54-212ENST00000556992 PROB1E7EW31 1015 aa4.18□□□□□ -1.74
SRP54-212ENST00000556992 TLR4O00206 839 aa4.18□□□□□ -1.74
SRP54-212ENST00000556992 RTCAO00442 366 aaKnown RBP4.18□□□□□ -1.74
SRP54-212ENST00000556992 SOCS2O14508 198 aa4.18□□□□□ -1.74
SRP54-212ENST00000556992 HAT1O14929 419 aa4.18□□□□□ -1.74
SRP54-212ENST00000556992 SCAMP1O15126 338 aa4.18□□□□□ -1.74
SRP54-212ENST00000556992 VILLO15195 856 aa4.18□□□□□ -1.74
SRP54-212ENST00000556992 ZSCAN9O15535 394 aaPredicted RBP4.18□□□□□ -1.74
SRP54-212ENST00000556992 ERI3O43414 337 aaKnown RBP4.18□□□□□ -1.74
SRP54-212ENST00000556992 PROM1O43490 865 aa4.18□□□□□ -1.74
SRP54-212ENST00000556992 TMPRSS11DO60235 418 aa4.18□□□□□ -1.74
SRP54-212ENST00000556992 E2F6O75461 281 aa4.18□□□□□ -1.74
SRP54-212ENST00000556992 SERPINB7O75635 380 aa4.18□□□□□ -1.74
SRP54-212ENST00000556992 EML2O95834 649 aa4.18□□□□□ -1.74
SRP54-212ENST00000556992 GPANK1O95872 356 aa4.18□□□□□ -1.74
SRP54-212ENST00000556992 TBX6O95947 436 aaPredicted RBP4.18□□□□□ -1.74
SRP54-212ENST00000556992 FABP3P05413 133 aa4.18□□□□□ -1.74
SRP54-212ENST00000556992 SLC35G6P0C7Q6 338 aa4.18□□□□□ -1.74
SRP54-212ENST00000556992 UBTFL6P0CB48 400 aaPredicted RBP4.18□□□□□ -1.74
SRP54-212ENST00000556992 FOSL2P15408 326 aa4.18□□□□□ -1.74
SRP54-212ENST00000556992 ZNF23P17027 643 aa4.18□□□□□ -1.74
SRP54-212ENST00000556992 CSNK2A2P19784 350 aaPredicted RBP4.18□□□□□ -1.74
SRP54-212ENST00000556992 ATP5A1P25705 553 aaKnown RBP4.18□□□□□ -1.74
SRP54-212ENST00000556992 PSMB5P28074 263 aa4.18□□□□□ -1.74
SRP54-212ENST00000556992 PCGF2P35227 344 aa4.18□□□□□ -1.74
SRP54-212ENST00000556992 FRKP42685 505 aaPredicted RBP4.18□□□□□ -1.74
SRP54-212ENST00000556992 SSR2P43308 183 aa4.18□□□□□ -1.74
SRP54-212ENST00000556992 MAGEA2P43356 314 aa4.18□□□□□ -1.74
SRP54-212ENST00000556992 RPL5P46777 297 aaKnown RBP4.18□□□□□ -1.74
SRP54-212ENST00000556992 ALDH9A1P49189 494 aa4.18□□□□□ -1.74
SRP54-212ENST00000556992 CCT3P49368 545 aaKnown RBP4.18□□□□□ -1.74
SRP54-212ENST00000556992 RPS6KA3P51812 740 aa4.18□□□□□ -1.74
SRP54-212ENST00000556992 UBE2IP63279 158 aaKnown RBP4.18□□□□□ -1.74
SRP54-212ENST00000556992 SELENOWP63302 87 aa4.18□□□□□ -1.74
SRP54-212ENST00000556992 BTN3A2P78410 334 aa4.18□□□□□ -1.74
SRP54-212ENST00000556992 CDK6Q00534 326 aa4.18□□□□□ -1.74
SRP54-212ENST00000556992 MERTKQ12866 999 aa4.18□□□□□ -1.74
SRP54-212ENST00000556992 EIF2B5Q13144 721 aaKnown RBP4.18□□□□□ -1.74
SRP54-212ENST00000556992 DAG1Q14118 895 aa4.18□□□□□ -1.74
SRP54-212ENST00000556992 GPR18Q14330 331 aa4.18□□□□□ -1.74
SRP54-212ENST00000556992 GK3PQ14409 553 aa4.18□□□□□ -1.74
SRP54-212ENST00000556992 UBXN2BQ14CS0 331 aa4.18□□□□□ -1.74
SRP54-212ENST00000556992 PDCD1Q15116 288 aa4.18□□□□□ -1.74
SRP54-212ENST00000556992 MST1LQ2TV78 715 aa4.18□□□□□ -1.74
SRP54-212ENST00000556992 RFX4Q33E94 735 aa4.18□□□□□ -1.74
SRP54-212ENST00000556992 CYBRD1Q53TN4 286 aa4.18□□□□□ -1.74
SRP54-212ENST00000556992 TOR1AIP1Q5JTV8 583 aa4.18□□□□□ -1.74
SRP54-212ENST00000556992 TPRG1LQ5T0D9 272 aa4.18□□□□□ -1.74
SRP54-212ENST00000556992 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.18□□□□□ -1.74
SRP54-212ENST00000556992 NDUFAF5Q5TEU4 345 aa4.18□□□□□ -1.74
SRP54-212ENST00000556992 BROXQ5VW32 411 aa4.18□□□□□ -1.74
SRP54-212ENST00000556992 KIAA1614Q5VZ46 1190 aa4.18□□□□□ -1.74
SRP54-212ENST00000556992 TTC23Q5W5X9 447 aa4.18□□□□□ -1.74
SRP54-212ENST00000556992 OR2T5Q6IEZ7 315 aa4.18□□□□□ -1.74
SRP54-212ENST00000556992 KRT80Q6KB66 452 aa4.18□□□□□ -1.74
SRP54-212ENST00000556992 REEP3Q6NUK4 255 aa4.18□□□□□ -1.74
SRP54-212ENST00000556992 FIGLAQ6QHK4 219 aa4.18□□□□□ -1.74
SRP54-212ENST00000556992 ENPP6Q6UWR7 440 aa4.18□□□□□ -1.74
SRP54-212ENST00000556992 ANGPTL8Q6UXH0 198 aa4.18□□□□□ -1.74
SRP54-212ENST00000556992 SLC36A4Q6YBV0 504 aa4.18□□□□□ -1.74
SRP54-212ENST00000556992 Q6ZS52 159 aa4.18□□□□□ -1.74
SRP54-212ENST00000556992 C6orf120Q7Z4R8 191 aa4.18□□□□□ -1.74
SRP54-212ENST00000556992 C1QL2Q7Z5L3 287 aa4.18□□□□□ -1.74
SRP54-212ENST00000556992 ASPGQ86U10 573 aa4.18□□□□□ -1.74
SRP54-212ENST00000556992 PARGQ86W56 976 aa4.18□□□□□ -1.74
SRP54-212ENST00000556992 OOSP2Q86WS3 158 aa4.18□□□□□ -1.74
SRP54-212ENST00000556992 GKN2Q86XP6 184 aa4.18□□□□□ -1.74
SRP54-212ENST00000556992 PTOV1Q86YD1 416 aa4.18□□□□□ -1.74
SRP54-212ENST00000556992 ARMC8Q8IUR7 673 aa4.18□□□□□ -1.74
SRP54-212ENST00000556992 PLD3Q8IV08 490 aa4.18□□□□□ -1.74
SRP54-212ENST00000556992 ZDHHC21Q8IVQ6 265 aa4.18□□□□□ -1.74
SRP54-212ENST00000556992 UBALD2Q8IYN6 164 aa4.18□□□□□ -1.74
SRP54-212ENST00000556992 CLEC4FQ8N1N0 589 aa4.18□□□□□ -1.74
SRP54-212ENST00000556992 ACOT4Q8N9L9 421 aa4.18□□□□□ -1.74
SRP54-212ENST00000556992 CAMKVQ8NCB2 501 aa4.18□□□□□ -1.74
SRP54-212ENST00000556992 FAM46DQ8NEK8 389 aa4.18□□□□□ -1.74
SRP54-212ENST00000556992 OR2T29Q8NH02 315 aa4.18□□□□□ -1.74
SRP54-212ENST00000556992 OR5K1Q8NHB7 308 aa4.18□□□□□ -1.74
SRP54-212ENST00000556992 CCL4L1Q8NHW4 92 aa4.18□□□□□ -1.74
SRP54-212ENST00000556992 PSMA8Q8TAA3 256 aa4.18□□□□□ -1.74
SRP54-212ENST00000556992 MAGEE2Q8TD90 523 aaPredicted RBP4.18□□□□□ -1.74
SRP54-212ENST00000556992 TMBIM1Q969X1 311 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms