RNA–Protein interactions for RNA: ENST00000556718.1

PRPF39-210, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-210ENST00000556718 RNF6Q9Y252 685 aa3.6□□□□□ -1.83
PRPF39-210ENST00000556718 OR10H1Q9Y4A9 318 aa3.6□□□□□ -1.83
PRPF39-210ENST00000556718 V9GYY5 206 aaPredicted RBP3.6□□□□□ -1.83
PRPF39-210ENST00000556718 ROCK2O75116 1388 aaKnown RBP3.6□□□□□ -1.83
PRPF39-210ENST00000556718 INSRP06213 1382 aa3.6□□□□□ -1.83
PRPF39-210ENST00000556718 CCDC7Q96M83 1385 aa3.6□□□□□ -1.83
PRPF39-210ENST00000556718 IGKV3D-15A0A087WSY6 115 aa3.59□□□□□ -1.83
PRPF39-210ENST00000556718 TRGV8A0A0C4DH27 118 aa3.59□□□□□ -1.83
PRPF39-210ENST00000556718 FBLL1A6NHQ2 334 aaKnown RBP3.59□□□□□ -1.83
PRPF39-210ENST00000556718 G3V2L1 256 aa3.59□□□□□ -1.83
PRPF39-210ENST00000556718 H0YL77 283 aa3.59□□□□□ -1.83
PRPF39-210ENST00000556718 K7EQM0 130 aa3.59□□□□□ -1.83
PRPF39-210ENST00000556718 XPO1O14980 1071 aaKnown RBP3.59□□□□□ -1.83
PRPF39-210ENST00000556718 RANBP6O60518 1105 aaKnown RBP3.59□□□□□ -1.83
PRPF39-210ENST00000556718 MTX2O75431 263 aa3.59□□□□□ -1.83
PRPF39-210ENST00000556718 PDE5AO76074 875 aa3.59□□□□□ -1.83
PRPF39-210ENST00000556718 IGSF6O95976 241 aa3.59□□□□□ -1.83
PRPF39-210ENST00000556718 MBD3O95983 291 aa3.59□□□□□ -1.83
PRPF39-210ENST00000556718 GOT2P00505 430 aaKnown RBP3.59□□□□□ -1.83
PRPF39-210ENST00000556718 OPN1MWP04001 364 aa3.59□□□□□ -1.83
PRPF39-210ENST00000556718 FCGR3AP08637 254 aa3.59□□□□□ -1.83
PRPF39-210ENST00000556718 OR9G9P0C7N8 305 aa3.59□□□□□ -1.83
PRPF39-210ENST00000556718 OPN1MW2P0DN77 364 aa3.59□□□□□ -1.83
PRPF39-210ENST00000556718 OPN1MW3P0DN78 364 aa3.59□□□□□ -1.83
PRPF39-210ENST00000556718 CLUP10909 449 aa3.59□□□□□ -1.83
PRPF39-210ENST00000556718 NEFHP12036 1026 aa3.59□□□□□ -1.83
PRPF39-210ENST00000556718 HSD17B1P14061 328 aa3.59□□□□□ -1.83
PRPF39-210ENST00000556718 FOSL2P15408 326 aa3.59□□□□□ -1.83
PRPF39-210ENST00000556718 H2AFXP16104 143 aaPredicted RBP3.59□□□□□ -1.83
PRPF39-210ENST00000556718 GLRA2P23416 452 aa3.59□□□□□ -1.83
PRPF39-210ENST00000556718 CYLC1P35663 651 aaPredicted RBP3.59□□□□□ -1.83
PRPF39-210ENST00000556718 ACADVLP49748 655 aa3.59□□□□□ -1.83
PRPF39-210ENST00000556718 TPM4P67936 248 aa3.59□□□□□ -1.83
PRPF39-210ENST00000556718 MAP2K1Q02750 393 aaPredicted RBP3.59□□□□□ -1.83
PRPF39-210ENST00000556718 ZP4Q12836 540 aa3.59□□□□□ -1.83
PRPF39-210ENST00000556718 GPM6BQ13491 265 aa3.59□□□□□ -1.83
PRPF39-210ENST00000556718 SCYL2Q6P3W7 929 aa3.59□□□□□ -1.83
PRPF39-210ENST00000556718 ATRAIDQ6UW56 229 aa3.59□□□□□ -1.83
PRPF39-210ENST00000556718 GDPGP1Q6ZNW5 385 aa3.59□□□□□ -1.83
PRPF39-210ENST00000556718 VASH2Q86V25 355 aa3.59□□□□□ -1.83
PRPF39-210ENST00000556718 CATSPER3Q86XQ3 398 aa3.59□□□□□ -1.83
PRPF39-210ENST00000556718 RNF130Q86XS8 419 aa3.59□□□□□ -1.83
PRPF39-210ENST00000556718 OR2T34Q8NGX1 318 aa3.59□□□□□ -1.83
PRPF39-210ENST00000556718 PNPT1Q8TCS8 783 aaKnown RBP3.59□□□□□ -1.83
PRPF39-210ENST00000556718 DLX4Q92988 240 aaPredicted RBP3.59□□□□□ -1.83
PRPF39-210ENST00000556718 SENP8Q96LD8 212 aa3.59□□□□□ -1.83
PRPF39-210ENST00000556718 ZNF607Q96SK3 696 aa3.59□□□□□ -1.83
PRPF39-210ENST00000556718 LITAFQ99732 161 aa3.59□□□□□ -1.83
PRPF39-210ENST00000556718 NFKBIZQ9BYH8 718 aa3.59□□□□□ -1.83
PRPF39-210ENST00000556718 FAM107BQ9H098 131 aa3.59□□□□□ -1.83
PRPF39-210ENST00000556718 PARLQ9H300 379 aa3.59□□□□□ -1.83
PRPF39-210ENST00000556718 RNF41Q9H4P4 317 aaPredicted RBP3.59□□□□□ -1.83
PRPF39-210ENST00000556718 AGPAT5Q9NUQ2 364 aa3.59□□□□□ -1.83
PRPF39-210ENST00000556718 DCAF13Q9NV06 445 aaKnown RBP3.59□□□□□ -1.83
PRPF39-210ENST00000556718 THEGQ9P2T0 379 aa3.59□□□□□ -1.83
PRPF39-210ENST00000556718 EIF3LQ9Y262 564 aaKnown RBP3.59□□□□□ -1.83
PRPF39-210ENST00000556718 SMAD5-AS1Q9Y6J3 95 aa3.59□□□□□ -1.83
PRPF39-210ENST00000556718 BRD4O60885 1362 aaPredicted RBP3.59□□□□□ -1.83
PRPF39-210ENST00000556718 PARD3Q8TEW0 1356 aa3.59□□□□□ -1.83
PRPF39-210ENST00000556718 NCOA2Q15596 1464 aa3.59□□□□□ -1.84
PRPF39-210ENST00000556718 TRBV5-4A0A0C4DH59 114 aa3.58□□□□□ -1.84
PRPF39-210ENST00000556718 ASB14A6NK59 587 aa3.58□□□□□ -1.84
PRPF39-210ENST00000556718 TRIM64CA6NLI5 447 aa3.58□□□□□ -1.84
PRPF39-210ENST00000556718 LRRC30A6NM36 301 aa3.58□□□□□ -1.84
PRPF39-210ENST00000556718 SDHDO14521 159 aa3.58□□□□□ -1.84
PRPF39-210ENST00000556718 DUS4LO95620 317 aaKnown RBP3.58□□□□□ -1.84
PRPF39-210ENST00000556718 ZSCAN5DPP0CG00 497 aa3.58□□□□□ -1.84
PRPF39-210ENST00000556718 UCP1P25874 307 aa3.58□□□□□ -1.84
PRPF39-210ENST00000556718 CASQ1P31415 396 aa3.58□□□□□ -1.84
PRPF39-210ENST00000556718 SAA4P35542 130 aa3.58□□□□□ -1.84
PRPF39-210ENST00000556718 CAPGP40121 348 aa3.58□□□□□ -1.84
PRPF39-210ENST00000556718 PGFP49763 221 aa3.58□□□□□ -1.84
PRPF39-210ENST00000556718 EMDP50402 254 aa3.58□□□□□ -1.84
PRPF39-210ENST00000556718 CALCOCO2Q13137 446 aa3.58□□□□□ -1.84
PRPF39-210ENST00000556718 ITPK1Q13572 414 aa3.58□□□□□ -1.84
PRPF39-210ENST00000556718 ZNF146Q15072 292 aa3.58□□□□□ -1.84
PRPF39-210ENST00000556718 CEP55Q53EZ4 464 aa3.58□□□□□ -1.84
PRPF39-210ENST00000556718 SPATA46Q5T0L3 261 aa3.58□□□□□ -1.84
PRPF39-210ENST00000556718 STOX1Q6ZVD7 989 aa3.58□□□□□ -1.84
PRPF39-210ENST00000556718 LRRC70Q7Z2Q7 622 aa3.58□□□□□ -1.84
PRPF39-210ENST00000556718 NOTCH2NLQ7Z3S9 236 aa3.58□□□□□ -1.84
PRPF39-210ENST00000556718 CARM1Q86X55 608 aa3.58□□□□□ -1.84
PRPF39-210ENST00000556718 EGFL6Q8IUX8 553 aa3.58□□□□□ -1.84
PRPF39-210ENST00000556718 GRAMD2AQ8IUY3 354 aa3.58□□□□□ -1.84
PRPF39-210ENST00000556718 NFAM1Q8NET5 270 aaPredicted RBP3.58□□□□□ -1.84
PRPF39-210ENST00000556718 OR5AU1Q8NGC0 362 aa3.58□□□□□ -1.84
PRPF39-210ENST00000556718 OR52M1Q8NGK5 317 aa3.58□□□□□ -1.84
PRPF39-210ENST00000556718 SLC5A11Q8WWX8 675 aa3.58□□□□□ -1.84
PRPF39-210ENST00000556718 UPRTQ96BW1 309 aa3.58□□□□□ -1.84
PRPF39-210ENST00000556718 BIRC7Q96CA5 298 aa3.58□□□□□ -1.84
PRPF39-210ENST00000556718 C4orf36Q96KX1 117 aa3.58□□□□□ -1.84
PRPF39-210ENST00000556718 FAM210AQ96ND0 272 aa3.58□□□□□ -1.84
PRPF39-210ENST00000556718 IWS1Q96ST2 819 aa3.58□□□□□ -1.84
PRPF39-210ENST00000556718 CCT7Q99832 543 aa3.58□□□□□ -1.84
PRPF39-210ENST00000556718 HSD17B14Q9BPX1 270 aa3.58□□□□□ -1.84
PRPF39-210ENST00000556718 FAM173AQ9BQD7 235 aa3.58□□□□□ -1.84
PRPF39-210ENST00000556718 TRIM51Q9BSJ1 452 aa3.58□□□□□ -1.84
PRPF39-210ENST00000556718 ALG12Q9BV10 488 aa3.58□□□□□ -1.84
PRPF39-210ENST00000556718 LIME1Q9H400 295 aa3.58□□□□□ -1.84
PRPF39-210ENST00000556718 DHX33Q9H6R0 707 aaKnown RBP3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms