RNA–Protein interactions for RNA: ENST00000556210.1

CUX1-215, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,044 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-215ENST00000556210 HTR2BP41595 481 aa13.99□□□□□ -0.17
CUX1-215ENST00000556210 RAB14P61106 215 aa13.99□□□□□ -0.17
CUX1-215ENST00000556210 PRKCDQ05655 676 aa13.99□□□□□ -0.17
CUX1-215ENST00000556210 ANGPT1Q15389 498 aa13.99□□□□□ -0.17
CUX1-215ENST00000556210 KLHL22Q53GT1 634 aa13.99□□□□□ -0.17
CUX1-215ENST00000556210 ZNF362Q5T0B9 420 aaPredicted RBP13.99□□□□□ -0.17
CUX1-215ENST00000556210 PRPF38BQ5VTL8 546 aaKnown RBP13.99□□□□□ -0.17
CUX1-215ENST00000556210 UNC5DQ6UXZ4 953 aa13.99□□□□□ -0.17
CUX1-215ENST00000556210 ZNF438Q7Z4V0 828 aa13.99□□□□□ -0.17
CUX1-215ENST00000556210 NLGN4YQ8NFZ3 816 aaPredicted RBP13.99□□□□□ -0.17
CUX1-215ENST00000556210 SMAP2Q8WU79 429 aaPredicted RBP13.99□□□□□ -0.17
CUX1-215ENST00000556210 CDS1Q92903 461 aa13.99□□□□□ -0.17
CUX1-215ENST00000556210 AHCYL2Q96HN2 611 aaKnown RBP13.99□□□□□ -0.17
CUX1-215ENST00000556210 MS4A8Q9BY19 250 aa13.99□□□□□ -0.17
CUX1-215ENST00000556210 SLAMF7Q9NQ25 335 aa13.99□□□□□ -0.17
CUX1-215ENST00000556210 KCMF1Q9P0J7 381 aa13.99□□□□□ -0.17
CUX1-215ENST00000556210 CMAHPQ9Y471 501 aa13.99□□□□□ -0.17
CUX1-215ENST00000556210 IGLV3-16A0A075B6K0 115 aa13.99□□□□□ -0.17
CUX1-215ENST00000556210 A0A1W2PQ09 198 aa13.99□□□□□ -0.17
CUX1-215ENST00000556210 H3BQ06 376 aaPredicted RBP13.99□□□□□ -0.17
CUX1-215ENST00000556210 FCMRO60667 390 aa13.99□□□□□ -0.17
CUX1-215ENST00000556210 AIFM1O95831 613 aa13.99□□□□□ -0.17
CUX1-215ENST00000556210 SLC2A2P11168 524 aaPredicted RBP13.99□□□□□ -0.17
CUX1-215ENST00000556210 MTNR1AP48039 350 aa13.99□□□□□ -0.17
CUX1-215ENST00000556210 GIPRP48546 466 aa13.99□□□□□ -0.17
CUX1-215ENST00000556210 FAM111BQ6SJ93 734 aa13.99□□□□□ -0.17
CUX1-215ENST00000556210 LCTLQ6UWM7 567 aa13.99□□□□□ -0.17
CUX1-215ENST00000556210 CPOQ8IVL8 374 aa13.99□□□□□ -0.17
CUX1-215ENST00000556210 IZUMO1Q8IYV9 350 aa13.99□□□□□ -0.17
CUX1-215ENST00000556210 SLC16A11Q8NCK7 471 aa13.99□□□□□ -0.17
CUX1-215ENST00000556210 SNX33Q8WV41 574 aa13.99□□□□□ -0.17
CUX1-215ENST00000556210 C7orf34Q96L11 122 aa13.99□□□□□ -0.17
CUX1-215ENST00000556210 ASIC5Q9NY37 505 aa13.99□□□□□ -0.17
CUX1-215ENST00000556210 HCN3Q9P1Z3 774 aa13.99□□□□□ -0.17
CUX1-215ENST00000556210 ADAM30Q9UKF2 790 aa13.99□□□□□ -0.17
CUX1-215ENST00000556210 IKZF2Q9UKS7 526 aa13.99□□□□□ -0.17
CUX1-215ENST00000556210 GRIP1Q9Y3R0 1128 aa13.99□□□□□ -0.17
CUX1-215ENST00000556210 CASP8AP2Q9UKL3 1982 aa13.98□□□□□ -0.17
CUX1-215ENST00000556210 PRR23D1E9PI22 279 aaPredicted RBP13.98□□□□□ -0.17
CUX1-215ENST00000556210 PRR23D2P0DMB1 279 aaPredicted RBP13.98□□□□□ -0.17
CUX1-215ENST00000556210 GBX1Q14549 363 aa13.98□□□□□ -0.17
CUX1-215ENST00000556210 ZNF267Q14586 743 aaPredicted RBP13.98□□□□□ -0.17
CUX1-215ENST00000556210 ELMOD2Q8IZ81 293 aa13.98□□□□□ -0.17
CUX1-215ENST00000556210 COQ8BQ96D53 544 aa13.98□□□□□ -0.17
CUX1-215ENST00000556210 NELL2Q99435 816 aa13.98□□□□□ -0.17
CUX1-215ENST00000556210 CCDC32Q9BV29 185 aa13.98□□□□□ -0.17
CUX1-215ENST00000556210 SAGE1Q9NXZ1 904 aa13.98□□□□□ -0.17
CUX1-215ENST00000556210 OSGIN1Q9UJX0 560 aa13.98□□□□□ -0.17
CUX1-215ENST00000556210 SPATA2Q9UM82 520 aa13.98□□□□□ -0.17
CUX1-215ENST00000556210 ZSCAN5BA6NJL1 495 aa13.98□□□□□ -0.17
CUX1-215ENST00000556210 HSD17B2P37059 387 aa13.98□□□□□ -0.17
CUX1-215ENST00000556210 LIM2P55344 173 aa13.98□□□□□ -0.17
CUX1-215ENST00000556210 CSNK1G2P78368 415 aa13.98□□□□□ -0.17
CUX1-215ENST00000556210 SUZ12Q15022 739 aaKnown RBP13.98□□□□□ -0.17
CUX1-215ENST00000556210 TRAM2Q15035 370 aa13.98□□□□□ -0.17
CUX1-215ENST00000556210 SEC23BQ15437 767 aa13.98□□□□□ -0.17
CUX1-215ENST00000556210 LAIR1Q6GTX8 287 aa13.98□□□□□ -0.17
CUX1-215ENST00000556210 TCTN3Q6NUS6 607 aa13.98□□□□□ -0.17
CUX1-215ENST00000556210 VASH1Q7L8A9 365 aaPredicted RBP13.98□□□□□ -0.17
CUX1-215ENST00000556210 RANBP3LQ86VV4 465 aaPredicted RBP13.98□□□□□ -0.17
CUX1-215ENST00000556210 LAX1Q8IWV1 398 aa13.98□□□□□ -0.17
CUX1-215ENST00000556210 SYT14Q8NB59 555 aa13.98□□□□□ -0.17
CUX1-215ENST00000556210 NEIL3Q8TAT5 605 aa13.98□□□□□ -0.17
CUX1-215ENST00000556210 ZNF354BQ96LW1 612 aa13.98□□□□□ -0.17
CUX1-215ENST00000556210 TPSD1Q9BZJ3 242 aa13.98□□□□□ -0.17
CUX1-215ENST00000556210 BTBD1Q9H0C5 482 aa13.98□□□□□ -0.17
CUX1-215ENST00000556210 RANBP2P49792 3224 aaKnown RBP13.98□□□□□ -0.17
CUX1-215ENST00000556210 BLOC1S5-TXNDC5H3BN57 136 aa13.98□□□□□ -0.17
CUX1-215ENST00000556210 KHNYNO15037 678 aaKnown RBP13.98□□□□□ -0.17
CUX1-215ENST00000556210 MRPS14O60783 128 aaKnown RBP13.98□□□□□ -0.17
CUX1-215ENST00000556210 ADAP00813 363 aa13.98□□□□□ -0.17
CUX1-215ENST00000556210 IL7P13232 177 aa13.98□□□□□ -0.17
CUX1-215ENST00000556210 BCL6P41182 706 aa13.98□□□□□ -0.17
CUX1-215ENST00000556210 DCDC1P59894 354 aa13.98□□□□□ -0.17
CUX1-215ENST00000556210 TTLQ8NG68 377 aa13.98□□□□□ -0.17
CUX1-215ENST00000556210 ZNF566Q969W8 418 aa13.98□□□□□ -0.17
CUX1-215ENST00000556210 NEDD4LQ96PU5 975 aa13.98□□□□□ -0.17
CUX1-215ENST00000556210 CDADC1Q9BWV3 514 aa13.98□□□□□ -0.17
CUX1-215ENST00000556210 FGF22Q9HCT0 170 aa13.98□□□□□ -0.17
CUX1-215ENST00000556210 RANGRFQ9HD47 186 aaPredicted RBP13.98□□□□□ -0.17
CUX1-215ENST00000556210 CYP8B1Q9UNU6 501 aa13.98□□□□□ -0.17
CUX1-215ENST00000556210 SPEF1Q9Y4P9 236 aa13.98□□□□□ -0.17
CUX1-215ENST00000556210 PBX2P40425 430 aa13.97□□□□□ -0.17
CUX1-215ENST00000556210 ASPGQ86U10 573 aa13.97□□□□□ -0.17
CUX1-215ENST00000556210 FBXL6Q8N531 539 aa13.97□□□□□ -0.17
CUX1-215ENST00000556210 LRRC17Q8N6Y2 441 aa13.97□□□□□ -0.17
CUX1-215ENST00000556210 OR52E4Q8NGH9 312 aa13.97□□□□□ -0.17
CUX1-215ENST00000556210 PDXPQ96GD0 296 aa13.97□□□□□ -0.17
CUX1-215ENST00000556210 SAP130Q9H0E3 1048 aa13.97□□□□□ -0.17
CUX1-215ENST00000556210 SEC14L4Q9UDX3 406 aa13.97□□□□□ -0.17
CUX1-215ENST00000556210 SLC7A7Q9UM01 511 aa13.97□□□□□ -0.17
CUX1-215ENST00000556210 PADI2Q9Y2J8 665 aa13.97□□□□□ -0.17
CUX1-215ENST00000556210 KCNE3Q9Y6H6 103 aa13.97□□□□□ -0.17
CUX1-215ENST00000556210 A0A1W2PRG6 482 aa13.97□□□□□ -0.17
CUX1-215ENST00000556210 RIIAD1A6NNX1 92 aa13.97□□□□□ -0.17
CUX1-215ENST00000556210 FOXE1O00358 373 aaPredicted RBP13.97□□□□□ -0.17
CUX1-215ENST00000556210 KIAA0355O15063 1070 aa13.97□□□□□ -0.17
CUX1-215ENST00000556210 PRKYO43930 277 aa13.97□□□□□ -0.17
CUX1-215ENST00000556210 BIKQ13323 160 aa13.97□□□□□ -0.17
CUX1-215ENST00000556210 PARM1Q6UWI2 310 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms