RNA–Protein interactions for RNA: ENST00000556017.1

CHMP4BP1-201, Transcript of charged multivesicular body protein 4B pseudogene 1, humanhuman

BASIC

Gene CHMP4BP1, Length 588 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1-201ENST00000556017 PRODH2Q9UF12 536 aa12.96□□□□□ -0.33
CHMP4BP1-201ENST00000556017 MXRA5Q9NR99 2828 aa12.95□□□□□ -0.34
CHMP4BP1-201ENST00000556017 A8MT66 165 aa12.95□□□□□ -0.34
CHMP4BP1-201ENST00000556017 H7C1Q1 480 aa12.95□□□□□ -0.34
CHMP4BP1-201ENST00000556017 OR4F21O95013 312 aa12.95□□□□□ -0.34
CHMP4BP1-201ENST00000556017 CRHP06850 196 aa12.95□□□□□ -0.34
CHMP4BP1-201ENST00000556017 RBP1P09455 135 aa12.95□□□□□ -0.34
CHMP4BP1-201ENST00000556017 TCEA1P23193 301 aaKnown RBP12.95□□□□□ -0.34
CHMP4BP1-201ENST00000556017 DPP4P27487 766 aa12.95□□□□□ -0.34
CHMP4BP1-201ENST00000556017 DEKP35659 375 aaKnown RBP12.95□□□□□ -0.34
CHMP4BP1-201ENST00000556017 CPOXP36551 454 aa12.95□□□□□ -0.34
CHMP4BP1-201ENST00000556017 CD79BP40259 229 aa12.95□□□□□ -0.34
CHMP4BP1-201ENST00000556017 ARL1P40616 181 aaPredicted RBP12.95□□□□□ -0.34
CHMP4BP1-201ENST00000556017 ALDH9A1P49189 494 aa12.95□□□□□ -0.34
CHMP4BP1-201ENST00000556017 TRA2BP62995 288 aaKnown RBP12.95□□□□□ -0.34
CHMP4BP1-201ENST00000556017 PSG6Q00889 435 aa12.95□□□□□ -0.34
CHMP4BP1-201ENST00000556017 TTC19Q6DKK2 380 aaPredicted RBP12.95□□□□□ -0.34
CHMP4BP1-201ENST00000556017 GRAMD2AQ8IUY3 354 aa12.95□□□□□ -0.34
CHMP4BP1-201ENST00000556017 OR7G2Q8NG99 324 aa12.95□□□□□ -0.34
CHMP4BP1-201ENST00000556017 OR9A2Q8NGT5 310 aa12.95□□□□□ -0.34
CHMP4BP1-201ENST00000556017 SELENOMQ8WWX9 145 aa12.95□□□□□ -0.34
CHMP4BP1-201ENST00000556017 Q96MF0 132 aa12.95□□□□□ -0.34
CHMP4BP1-201ENST00000556017 SFXN2Q96NB2 322 aa12.95□□□□□ -0.34
CHMP4BP1-201ENST00000556017 RAB17Q9H0T7 212 aa12.95□□□□□ -0.34
CHMP4BP1-201ENST00000556017 OPN3Q9H1Y3 402 aaPredicted RBP12.95□□□□□ -0.34
CHMP4BP1-201ENST00000556017 ACBD3Q9H3P7 528 aa12.95□□□□□ -0.34
CHMP4BP1-201ENST00000556017 ZNF395Q9H8N7 513 aaPredicted RBP12.95□□□□□ -0.34
CHMP4BP1-201ENST00000556017 FOLH1BQ9HBA9 442 aa12.95□□□□□ -0.34
CHMP4BP1-201ENST00000556017 UTS2RQ9UKP6 389 aa12.95□□□□□ -0.34
CHMP4BP1-201ENST00000556017 TRIM64A6NGJ6 449 aa12.94□□□□□ -0.34
CHMP4BP1-201ENST00000556017 TRIM64BA6NI03 449 aa12.94□□□□□ -0.34
CHMP4BP1-201ENST00000556017 MANBAO00462 879 aa12.94□□□□□ -0.34
CHMP4BP1-201ENST00000556017 FADS1O60427 444 aa12.94□□□□□ -0.34
CHMP4BP1-201ENST00000556017 ABCB7O75027 752 aa12.94□□□□□ -0.34
CHMP4BP1-201ENST00000556017 GUCY1B2O75343 617 aa12.94□□□□□ -0.34
CHMP4BP1-201ENST00000556017 IL3P08700 152 aa12.94□□□□□ -0.34
CHMP4BP1-201ENST00000556017 UGT2B10P36537 528 aa12.94□□□□□ -0.34
CHMP4BP1-201ENST00000556017 HSD17B3P37058 310 aa12.94□□□□□ -0.34
CHMP4BP1-201ENST00000556017 HTR6P50406 440 aa12.94□□□□□ -0.34
CHMP4BP1-201ENST00000556017 PNLIPRP2P54317 469 aa12.94□□□□□ -0.34
CHMP4BP1-201ENST00000556017 DIO3P55073 304 aa12.94□□□□□ -0.34
CHMP4BP1-201ENST00000556017 UNC50Q53HI1 259 aa12.94□□□□□ -0.34
CHMP4BP1-201ENST00000556017 AAGABQ6PD74 315 aa12.94□□□□□ -0.34
CHMP4BP1-201ENST00000556017 LARP4Q71RC2 724 aaKnown RBP eCLIP12.94□□□□□ -0.34
CHMP4BP1-201ENST00000556017 ZNF550Q7Z398 422 aa12.94□□□□□ -0.34
CHMP4BP1-201ENST00000556017 RELL1Q8IUW5 271 aa12.94□□□□□ -0.34
CHMP4BP1-201ENST00000556017 OR2M3Q8NG83 312 aa12.94□□□□□ -0.34
CHMP4BP1-201ENST00000556017 EFHD2Q96C19 240 aaPredicted RBP12.94□□□□□ -0.34
CHMP4BP1-201ENST00000556017 TMCO6Q96DC7 493 aa12.94□□□□□ -0.34
CHMP4BP1-201ENST00000556017 ERP27Q96DN0 273 aa12.94□□□□□ -0.34
CHMP4BP1-201ENST00000556017 PGM2Q96G03 612 aa12.94□□□□□ -0.34
CHMP4BP1-201ENST00000556017 ACPTQ9BZG2 426 aa12.94□□□□□ -0.34
CHMP4BP1-201ENST00000556017 RNF122Q9H9V4 155 aa12.94□□□□□ -0.34
CHMP4BP1-201ENST00000556017 VPS29Q9UBQ0 182 aa12.94□□□□□ -0.34
CHMP4BP1-201ENST00000556017 NDRG3Q9UGV2 375 aa12.94□□□□□ -0.34
CHMP4BP1-201ENST00000556017 MCM8Q9UJA3 840 aa12.94□□□□□ -0.34
CHMP4BP1-201ENST00000556017 ADAM21Q9UKJ8 722 aa12.94□□□□□ -0.34
CHMP4BP1-201ENST00000556017 ZNF337Q9Y3M9 751 aa12.94□□□□□ -0.34
CHMP4BP1-201ENST00000556017 STAB1Q9NY15 2570 aa12.93□□□□□ -0.34
CHMP4BP1-201ENST00000556017 FREM1Q5H8C1 2179 aa12.93□□□□□ -0.34
CHMP4BP1-201ENST00000556017 SLC22A20A6NK97 555 aa12.93□□□□□ -0.34
CHMP4BP1-201ENST00000556017 PLOD3O60568 738 aa12.93□□□□□ -0.34
CHMP4BP1-201ENST00000556017 PSMG1O95456 288 aa12.93□□□□□ -0.34
CHMP4BP1-201ENST00000556017 OTCP00480 354 aa12.93□□□□□ -0.34
CHMP4BP1-201ENST00000556017 THBDP07204 575 aa12.93□□□□□ -0.34
CHMP4BP1-201ENST00000556017 GCKP35557 465 aa12.93□□□□□ -0.34
CHMP4BP1-201ENST00000556017 CLDN20P56880 219 aa12.93□□□□□ -0.34
CHMP4BP1-201ENST00000556017 EEF1A1P68104 462 aaKnown RBP12.93□□□□□ -0.34
CHMP4BP1-201ENST00000556017 CAPRIN1Q14444 709 aaKnown RBP12.93□□□□□ -0.34
CHMP4BP1-201ENST00000556017 ACKR1Q16570 336 aa12.93□□□□□ -0.34
CHMP4BP1-201ENST00000556017 EEF1A1P5Q5VTE0 462 aa12.93□□□□□ -0.34
CHMP4BP1-201ENST00000556017 PRSS57Q6UWY2 283 aa12.93□□□□□ -0.34
CHMP4BP1-201ENST00000556017 C17orf53Q8N3J3 647 aaPredicted RBP12.93□□□□□ -0.34
CHMP4BP1-201ENST00000556017 ZNF610Q8N9Z0 462 aa12.93□□□□□ -0.34
CHMP4BP1-201ENST00000556017 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.93□□□□□ -0.34
CHMP4BP1-201ENST00000556017 DCAKDQ8WVC6 231 aa12.93□□□□□ -0.34
CHMP4BP1-201ENST00000556017 PIK3IP1Q96FE7 263 aa12.93□□□□□ -0.34
CHMP4BP1-201ENST00000556017 APIPQ96GX9 242 aa12.93□□□□□ -0.34
CHMP4BP1-201ENST00000556017 ZNF845Q96IR2 970 aaPredicted RBP12.93□□□□□ -0.34
CHMP4BP1-201ENST00000556017 PAFAH2Q99487 392 aa12.93□□□□□ -0.34
CHMP4BP1-201ENST00000556017 MRPL57Q9BQC6 102 aaKnown RBP12.93□□□□□ -0.34
CHMP4BP1-201ENST00000556017 CDC42EP4Q9H3Q1 356 aaKnown RBP12.93□□□□□ -0.34
CHMP4BP1-201ENST00000556017 DSN1Q9H410 356 aa12.93□□□□□ -0.34
CHMP4BP1-201ENST00000556017 PSME2Q9UL46 239 aa12.93□□□□□ -0.34
CHMP4BP1-201ENST00000556017 TMCO1Q9UM00 188 aa12.93□□□□□ -0.34
CHMP4BP1-201ENST00000556017 EIF3LQ9Y262 564 aaKnown RBP12.93□□□□□ -0.34
CHMP4BP1-201ENST00000556017 ZNF780BQ9Y6R6 833 aa12.93□□□□□ -0.34
CHMP4BP1-201ENST00000556017 CASKO14936 926 aa12.92□□□□□ -0.34
CHMP4BP1-201ENST00000556017 ARHGEF9O43307 516 aa12.92□□□□□ -0.34
CHMP4BP1-201ENST00000556017 EMC8O43402 210 aa12.92□□□□□ -0.34
CHMP4BP1-201ENST00000556017 SMPD2O60906 423 aa12.92□□□□□ -0.34
CHMP4BP1-201ENST00000556017 SMIM24O75264 130 aa12.92□□□□□ -0.34
CHMP4BP1-201ENST00000556017 SMNDC1O75940 238 aaKnown RBP eCLIP12.92□□□□□ -0.34
CHMP4BP1-201ENST00000556017 COL6A2P12110 1019 aa12.92□□□□□ -0.34
CHMP4BP1-201ENST00000556017 PEPDP12955 493 aa12.92□□□□□ -0.34
CHMP4BP1-201ENST00000556017 CR1P17927 2039 aa12.92□□□□□ -0.34
CHMP4BP1-201ENST00000556017 ECHS1P30084 290 aa12.92□□□□□ -0.34
CHMP4BP1-201ENST00000556017 EVI2BP34910 448 aa12.92□□□□□ -0.34
CHMP4BP1-201ENST00000556017 DSCR4P56555 118 aaPredicted RBP12.92□□□□□ -0.34
CHMP4BP1-201ENST00000556017 CLCQ05315 142 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms