RNA–Protein interactions for RNA: ENST00000554584.5

SYNE2-212, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5 BASIC

Gene SYNE2, Length 20,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-212ENST00000554584 SLC44A1Q8WWI5 657 aa3.14□□□□□ -1.91
SYNE2-212ENST00000554584 PATE1Q8WXA2 126 aa3.14□□□□□ -1.91
SYNE2-212ENST00000554584 TAMM41Q96BW9 452 aa3.14□□□□□ -1.91
SYNE2-212ENST00000554584 APOPT1Q96IL0 206 aa3.14□□□□□ -1.91
SYNE2-212ENST00000554584 ZCCHC3Q9NUD5 404 aaKnown RBP3.14□□□□□ -1.91
SYNE2-212ENST00000554584 IL36AQ9UHA7 158 aa3.14□□□□□ -1.91
SYNE2-212ENST00000554584 CLASP1Q7Z460 1538 aa3.14□□□□□ -1.91
SYNE2-212ENST00000554584 SPHKAPQ2M3C7 1700 aa3.14□□□□□ -1.91
SYNE2-212ENST00000554584 SONP18583 2426 aaKnown RBP3.14□□□□□ -1.91
SYNE2-212ENST00000554584 CD300LBA8K4G0 201 aa3.14□□□□□ -1.91
SYNE2-212ENST00000554584 PRR5-ARHGAP8B1AHC4 643 aa3.14□□□□□ -1.91
SYNE2-212ENST00000554584 CRTAPO75718 401 aaPredicted RBP3.14□□□□□ -1.91
SYNE2-212ENST00000554584 C1orf105O95561 183 aa3.14□□□□□ -1.91
SYNE2-212ENST00000554584 GSTT2BP0CG30 244 aa3.14□□□□□ -1.91
SYNE2-212ENST00000554584 SLC15A3Q8IY34 581 aa3.14□□□□□ -1.91
SYNE2-212ENST00000554584 ETNPPLQ8TBG4 499 aa3.14□□□□□ -1.91
SYNE2-212ENST00000554584 POPDC2Q9HBU9 364 aa3.14□□□□□ -1.91
SYNE2-212ENST00000554584 KCND1Q9NSA2 647 aa3.14□□□□□ -1.91
SYNE2-212ENST00000554584 LRRK1Q38SD2 2015 aa3.14□□□□□ -1.91
SYNE2-212ENST00000554584 ARPC4-TTLL3A0A0A6YYG9 625 aa3.14□□□□□ -1.91
SYNE2-212ENST00000554584 C4orf47A7E2U8 309 aa3.14□□□□□ -1.91
SYNE2-212ENST00000554584 NRG2O14511 850 aaPredicted RBP3.14□□□□□ -1.91
SYNE2-212ENST00000554584 UBXN7O94888 489 aa3.14□□□□□ -1.91
SYNE2-212ENST00000554584 NTN1O95631 604 aa3.14□□□□□ -1.91
SYNE2-212ENST00000554584 NOVA1P51513 510 aaKnown RBP3.14□□□□□ -1.91
SYNE2-212ENST00000554584 CDH4P55283 916 aa3.14□□□□□ -1.91
SYNE2-212ENST00000554584 ADAM8P78325 824 aa3.14□□□□□ -1.91
SYNE2-212ENST00000554584 SHC2P98077 582 aa3.14□□□□□ -1.91
SYNE2-212ENST00000554584 TMEM88Q6PEY1 159 aa3.14□□□□□ -1.91
SYNE2-212ENST00000554584 SLC7A5P1Q8MH63 180 aa3.14□□□□□ -1.91
SYNE2-212ENST00000554584 NUP37Q8NFH4 326 aa3.14□□□□□ -1.91
SYNE2-212ENST00000554584 LENG8Q96PV6 779 aaPredicted RBP3.14□□□□□ -1.91
SYNE2-212ENST00000554584 PCDHGA7Q9Y5G6 932 aa3.14□□□□□ -1.91
SYNE2-212ENST00000554584 TET1Q8NFU7 2136 aa3.14□□□□□ -1.91
SYNE2-212ENST00000554584 FABP12A6NFH5 140 aa3.14□□□□□ -1.91
SYNE2-212ENST00000554584 LYPLA2O95372 231 aa3.14□□□□□ -1.91
SYNE2-212ENST00000554584 LMAN2Q12907 356 aa3.14□□□□□ -1.91
SYNE2-212ENST00000554584 OR7A5Q15622 319 aa3.14□□□□□ -1.91
SYNE2-212ENST00000554584 AARDQ4LEZ3 155 aa3.14□□□□□ -1.91
SYNE2-212ENST00000554584 SYPL2Q5VXT5 272 aa3.14□□□□□ -1.91
SYNE2-212ENST00000554584 BBS12Q6ZW61 710 aa3.14□□□□□ -1.91
SYNE2-212ENST00000554584 ABRAQ8N0Z2 381 aa3.14□□□□□ -1.91
SYNE2-212ENST00000554584 DMBX1Q8NFW5 382 aa3.14□□□□□ -1.91
SYNE2-212ENST00000554584 ZNF420Q8TAQ5 688 aaPredicted RBP3.14□□□□□ -1.91
SYNE2-212ENST00000554584 TCF12Q99081 682 aa3.14□□□□□ -1.91
SYNE2-212ENST00000554584 SPATA5L1Q9BVQ7 753 aa3.14□□□□□ -1.91
SYNE2-212ENST00000554584 TIPINQ9BVW5 301 aa3.14□□□□□ -1.91
SYNE2-212ENST00000554584 TFB2MQ9H5Q4 396 aaKnown RBP3.14□□□□□ -1.91
SYNE2-212ENST00000554584 CNTN6Q9UQ52 1028 aa3.14□□□□□ -1.91
SYNE2-212ENST00000554584 PSAT1Q9Y617 370 aa3.14□□□□□ -1.91
SYNE2-212ENST00000554584 GLI2P10070 1586 aa3.14□□□□□ -1.91
SYNE2-212ENST00000554584 DHRS12A0PJE2 317 aa3.14□□□□□ -1.91
SYNE2-212ENST00000554584 C2orf78A6NCI8 922 aa3.14□□□□□ -1.91
SYNE2-212ENST00000554584 HEPACAM2A8MVW5 462 aa3.14□□□□□ -1.91
SYNE2-212ENST00000554584 BCKDKO14874 412 aa3.14□□□□□ -1.91
SYNE2-212ENST00000554584 NUAK1O60285 661 aa3.14□□□□□ -1.91
SYNE2-212ENST00000554584 GPANK1O95872 356 aa3.14□□□□□ -1.91
SYNE2-212ENST00000554584 PRB1P04280 392 aa3.14□□□□□ -1.91
SYNE2-212ENST00000554584 ADH5P11766 374 aa3.14□□□□□ -1.91
SYNE2-212ENST00000554584 AQP2P41181 271 aa3.14□□□□□ -1.91
SYNE2-212ENST00000554584 RAD52P43351 418 aa3.14□□□□□ -1.91
SYNE2-212ENST00000554584 SLC9A3R2Q15599 337 aa3.14□□□□□ -1.91
SYNE2-212ENST00000554584 PLCXD3Q63HM9 321 aa3.14□□□□□ -1.91
SYNE2-212ENST00000554584 RBMXL3Q8N7X1 1067 aaKnown RBP3.14□□□□□ -1.91
SYNE2-212ENST00000554584 OR51T1Q8NGJ9 327 aa3.14□□□□□ -1.91
SYNE2-212ENST00000554584 FBXO25Q8TCJ0 367 aa3.14□□□□□ -1.91
SYNE2-212ENST00000554584 PPP3R2Q96LZ3 170 aa3.14□□□□□ -1.91
SYNE2-212ENST00000554584 ONECUT1Q9UBC0 465 aa3.14□□□□□ -1.91
SYNE2-212ENST00000554584 EPHA6Q9UF33 1036 aa3.14□□□□□ -1.91
SYNE2-212ENST00000554584 SLC23A2Q9UGH3 650 aa3.14□□□□□ -1.91
SYNE2-212ENST00000554584 GREB1LQ9C091 1923 aaPredicted RBP3.14□□□□□ -1.91
SYNE2-212ENST00000554584 TRAV34A0A0B4J273 112 aa3.14□□□□□ -1.91
SYNE2-212ENST00000554584 FAM221AA4D161 298 aa3.14□□□□□ -1.91
SYNE2-212ENST00000554584 OR6C70A6NIJ9 312 aa3.14□□□□□ -1.91
SYNE2-212ENST00000554584 POM121CA8CG34 1229 aa3.14□□□□□ -1.91
SYNE2-212ENST00000554584 H7C417 338 aa3.14□□□□□ -1.91
SYNE2-212ENST00000554584 CSNK2A2P19784 350 aaPredicted RBP3.14□□□□□ -1.91
SYNE2-212ENST00000554584 ALX1Q15699 326 aa3.14□□□□□ -1.91
SYNE2-212ENST00000554584 ASTE1Q2TB18 679 aaPredicted RBP3.14□□□□□ -1.91
SYNE2-212ENST00000554584 HSD17B12Q53GQ0 312 aa3.14□□□□□ -1.91
SYNE2-212ENST00000554584 VWA2Q5GFL6 755 aa3.14□□□□□ -1.91
SYNE2-212ENST00000554584 Q6ZPB1 254 aaPredicted RBP3.14□□□□□ -1.91
SYNE2-212ENST00000554584 ABI3BPQ7Z7G0 1075 aa3.14□□□□□ -1.91
SYNE2-212ENST00000554584 IL17RDQ8NFM7 739 aa3.14□□□□□ -1.91
SYNE2-212ENST00000554584 ZNRF4Q8WWF5 429 aa3.14□□□□□ -1.91
SYNE2-212ENST00000554584 TMCO6Q96DC7 493 aa3.14□□□□□ -1.91
SYNE2-212ENST00000554584 ZDHHC15Q96MV8 337 aa3.14□□□□□ -1.91
SYNE2-212ENST00000554584 NXF2Q9GZY0 626 aaKnown RBP3.14□□□□□ -1.91
SYNE2-212ENST00000554584 POLR2J3Q9H1A7 115 aaKnown RBP3.14□□□□□ -1.91
SYNE2-212ENST00000554584 ERVMER34-1Q9H9K5 563 aa3.14□□□□□ -1.91
SYNE2-212ENST00000554584 B4GALT7Q9UBV7 327 aa3.14□□□□□ -1.91
SYNE2-212ENST00000554584 ZNF521Q96K83 1311 aa3.14□□□□□ -1.91
SYNE2-212ENST00000554584 IGHV3-21A0A0B4J1V1 117 aa3.14□□□□□ -1.91
SYNE2-212ENST00000554584 TCN2P20062 427 aa3.14□□□□□ -1.91
SYNE2-212ENST00000554584 ATP5A1P25705 553 aaKnown RBP3.14□□□□□ -1.91
SYNE2-212ENST00000554584 POU6F2P78424 691 aaPredicted RBP3.14□□□□□ -1.91
SYNE2-212ENST00000554584 RCAN2Q14206 197 aa3.14□□□□□ -1.91
SYNE2-212ENST00000554584 ARHGAP11BQ3KRB8 267 aa3.14□□□□□ -1.91
SYNE2-212ENST00000554584 KCNIP4Q6PIL6 250 aa3.14□□□□□ -1.91
SYNE2-212ENST00000554584 ZNF783Q6ZMS7 281 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms