RNA–Protein interactions for RNA: ENST00000553989.1

TDP1-208, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-208ENST00000553989 KEAP1Q14145 624 aa8.11□□□□□ -1.11
TDP1-208ENST00000553989 ZNF267Q14586 743 aaPredicted RBP8.11□□□□□ -1.11
TDP1-208ENST00000553989 OR4D1Q15615 310 aa8.11□□□□□ -1.11
TDP1-208ENST00000553989 ZNF791Q3KP31 576 aaPredicted RBP8.11□□□□□ -1.11
TDP1-208ENST00000553989 SPATS1Q496A3 300 aa8.11□□□□□ -1.11
TDP1-208ENST00000553989 FLYWCH1Q4VC44 716 aa8.11□□□□□ -1.11
TDP1-208ENST00000553989 ARL13AQ5H913 290 aaPredicted RBP8.11□□□□□ -1.11
TDP1-208ENST00000553989 CDKL4Q5MAI5 379 aa8.11□□□□□ -1.11
TDP1-208ENST00000553989 PRAMEF9Q5VWM5 478 aa8.11□□□□□ -1.11
TDP1-208ENST00000553989 KHDRBS2Q5VWX1 349 aaKnown RBP8.11□□□□□ -1.11
TDP1-208ENST00000553989 HLA-DQA1Q5Y7H0 255 aa8.11□□□□□ -1.11
TDP1-208ENST00000553989 TMEM198Q66K66 360 aa8.11□□□□□ -1.11
TDP1-208ENST00000553989 C18orf63Q68DL7 685 aa8.11□□□□□ -1.11
TDP1-208ENST00000553989 IZUMO2Q6UXV1 221 aa8.11□□□□□ -1.11
TDP1-208ENST00000553989 UBE3DQ7Z6J8 389 aa8.11□□□□□ -1.11
TDP1-208ENST00000553989 CDC20BQ86Y33 519 aa8.11□□□□□ -1.11
TDP1-208ENST00000553989 DND1Q8IYX4 353 aaKnown RBP8.11□□□□□ -1.11
TDP1-208ENST00000553989 PGAM4Q8N0Y7 254 aa8.11□□□□□ -1.11
TDP1-208ENST00000553989 TAGAPQ8N103 731 aa8.11□□□□□ -1.11
TDP1-208ENST00000553989 MMP21Q8N119 569 aa8.11□□□□□ -1.11
TDP1-208ENST00000553989 PLD6Q8N2A8 252 aaKnown RBP8.11□□□□□ -1.11
TDP1-208ENST00000553989 TMEM151AQ8N4L1 468 aa8.11□□□□□ -1.11
TDP1-208ENST00000553989 SLC15A4Q8N697 577 aa8.11□□□□□ -1.11
TDP1-208ENST00000553989 RELL2Q8NC24 303 aaPredicted RBP8.11□□□□□ -1.11
TDP1-208ENST00000553989 PDPRQ8NCN5 879 aa8.11□□□□□ -1.11
TDP1-208ENST00000553989 FBXO27Q8NI29 283 aa8.11□□□□□ -1.11
TDP1-208ENST00000553989 PAQR8Q8TEZ7 354 aa8.11□□□□□ -1.11
TDP1-208ENST00000553989 FAM222BQ8WU58 562 aa8.11□□□□□ -1.11
TDP1-208ENST00000553989 DIO2Q92813 273 aa8.11□□□□□ -1.11
TDP1-208ENST00000553989 HSPBAP1Q96EW2 488 aa8.11□□□□□ -1.11
TDP1-208ENST00000553989 WDR34Q96EX3 536 aa8.11□□□□□ -1.11
TDP1-208ENST00000553989 CMTM7Q96FZ5 175 aa8.11□□□□□ -1.11
TDP1-208ENST00000553989 FBXL20Q96IG2 436 aa8.11□□□□□ -1.11
TDP1-208ENST00000553989 LRGUKQ96M69 825 aa8.11□□□□□ -1.11
TDP1-208ENST00000553989 ALPK1Q96QP1 1244 aa8.11□□□□□ -1.11
TDP1-208ENST00000553989 SH3GL3Q99963 347 aa8.11□□□□□ -1.11
TDP1-208ENST00000553989 PELOQ9BRX2 385 aaKnown RBP8.11□□□□□ -1.11
TDP1-208ENST00000553989 SORBS1Q9BX66 1292 aaKnown RBP8.11□□□□□ -1.11
TDP1-208ENST00000553989 MRPL1Q9BYD6 325 aaKnown RBP8.11□□□□□ -1.11
TDP1-208ENST00000553989 CD244Q9BZW8 370 aa8.11□□□□□ -1.11
TDP1-208ENST00000553989 CXXC4Q9H2H0 198 aa8.11□□□□□ -1.11
TDP1-208ENST00000553989 ALG9Q9H6U8 611 aa8.11□□□□□ -1.11
TDP1-208ENST00000553989 VCX3AQ9NNX9 186 aa8.11□□□□□ -1.11
TDP1-208ENST00000553989 QPCTLQ9NXS2 382 aa8.11□□□□□ -1.11
TDP1-208ENST00000553989 CNIH4Q9P003 139 aa8.11□□□□□ -1.11
TDP1-208ENST00000553989 OPTCQ9UBM4 332 aa8.11□□□□□ -1.11
TDP1-208ENST00000553989 RAB26Q9ULW5 256 aa8.11□□□□□ -1.11
TDP1-208ENST00000553989 ANGPTL3Q9Y5C1 460 aa8.11□□□□□ -1.11
TDP1-208ENST00000553989 PRRC2AP48634 2157 aaKnown RBP8.1□□□□□ -1.11
TDP1-208ENST00000553989 SMIM31A0A1B0GVY4 71 aa8.1□□□□□ -1.11
TDP1-208ENST00000553989 CCDC189A1A4V9 331 aa8.1□□□□□ -1.11
TDP1-208ENST00000553989 TUBAL3A6NHL2 446 aa8.1□□□□□ -1.11
TDP1-208ENST00000553989 LRRC3CA6NJW4 275 aa8.1□□□□□ -1.11
TDP1-208ENST00000553989 GLOD5A6NK44 160 aa8.1□□□□□ -1.11
TDP1-208ENST00000553989 AHRRA9YTQ3 701 aa8.1□□□□□ -1.11
TDP1-208ENST00000553989 EEF1E1-BLOC1S5C9J1V9 151 aa8.1□□□□□ -1.11
TDP1-208ENST00000553989 TP53I11O14683 189 aa8.1□□□□□ -1.11
TDP1-208ENST00000553989 EEF1E1O43324 174 aaKnown RBP8.1□□□□□ -1.11
TDP1-208ENST00000553989 PROM1O43490 865 aa8.1□□□□□ -1.11
TDP1-208ENST00000553989 SCELO95171 688 aa8.1□□□□□ -1.11
TDP1-208ENST00000553989 STAMBPO95630 424 aa8.1□□□□□ -1.11
TDP1-208ENST00000553989 IGKV3-11P04433 115 aa8.1□□□□□ -1.11
TDP1-208ENST00000553989 ARL1P40616 181 aaPredicted RBP8.1□□□□□ -1.11
TDP1-208ENST00000553989 NAGLUP54802 743 aa8.1□□□□□ -1.11
TDP1-208ENST00000553989 ROR2Q01974 943 aaKnown RBP8.1□□□□□ -1.11
TDP1-208ENST00000553989 DUSP8Q13202 625 aa8.1□□□□□ -1.11
TDP1-208ENST00000553989 BIKQ13323 160 aa8.1□□□□□ -1.11
TDP1-208ENST00000553989 CCNIQ14094 377 aa8.1□□□□□ -1.11
TDP1-208ENST00000553989 ACAP2Q15057 778 aa8.1□□□□□ -1.11
TDP1-208ENST00000553989 RPS6KA2Q15349 733 aa8.1□□□□□ -1.11
TDP1-208ENST00000553989 SF3B4Q15427 424 aaKnown RBP eCLIP8.1□□□□□ -1.11
TDP1-208ENST00000553989 LSM12Q3MHD2 195 aaKnown RBP8.1□□□□□ -1.11
TDP1-208ENST00000553989 MMEL1Q495T6 779 aa8.1□□□□□ -1.11
TDP1-208ENST00000553989 ACSF3Q4G176 576 aaPredicted RBP8.1□□□□□ -1.11
TDP1-208ENST00000553989 SLC9B1Q4ZJI4 515 aa8.1□□□□□ -1.11
TDP1-208ENST00000553989 TBCELQ5QJ74 424 aa8.1□□□□□ -1.11
TDP1-208ENST00000553989 OGFRL1Q5TC84 451 aaPredicted RBP8.1□□□□□ -1.11
TDP1-208ENST00000553989 OR4C11Q6IEV9 310 aa8.1□□□□□ -1.11
TDP1-208ENST00000553989 CYP20A1Q6UW02 462 aa8.1□□□□□ -1.11
TDP1-208ENST00000553989 DGAT2L6Q6ZPD8 337 aa8.1□□□□□ -1.11
TDP1-208ENST00000553989 MAVSQ7Z434 540 aa8.1□□□□□ -1.11
TDP1-208ENST00000553989 CMC1Q7Z7K0 106 aa8.1□□□□□ -1.11
TDP1-208ENST00000553989 GPR180Q86V85 440 aa8.1□□□□□ -1.11
TDP1-208ENST00000553989 LACC1Q8IV20 430 aa8.1□□□□□ -1.11
TDP1-208ENST00000553989 PM20D2Q8IYS1 436 aa8.1□□□□□ -1.11
TDP1-208ENST00000553989 CCDC116Q8IYX3 515 aa8.1□□□□□ -1.11
TDP1-208ENST00000553989 LRRC25Q8N386 305 aaPredicted RBP8.1□□□□□ -1.11
TDP1-208ENST00000553989 ZNF781Q8N8C0 355 aa8.1□□□□□ -1.11
TDP1-208ENST00000553989 NAXEQ8NCW5 288 aa8.1□□□□□ -1.11
TDP1-208ENST00000553989 TNIP2Q8NFZ5 429 aa8.1□□□□□ -1.11
TDP1-208ENST00000553989 STAG3L4Q8TBR4 150 aa8.1□□□□□ -1.11
TDP1-208ENST00000553989 TANKQ92844 425 aa8.1□□□□□ -1.11
TDP1-208ENST00000553989 RIT1Q92963 219 aa8.1□□□□□ -1.11
TDP1-208ENST00000553989 RNASE6Q93091 150 aaKnown RBP8.1□□□□□ -1.11
TDP1-208ENST00000553989 RGMAQ96B86 450 aa8.1□□□□□ -1.11
TDP1-208ENST00000553989 CLPTM1LQ96KA5 538 aa8.1□□□□□ -1.11
TDP1-208ENST00000553989 TRIB1Q96RU8 372 aa8.1□□□□□ -1.11
TDP1-208ENST00000553989 CDRT15Q96T59 188 aa8.1□□□□□ -1.11
TDP1-208ENST00000553989 MTERF1Q99551 399 aaKnown RBP8.1□□□□□ -1.11
TDP1-208ENST00000553989 YIPF4Q9BSR8 244 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms