RNA–Protein interactions for RNA: ENST00000553938.5

SPTB-206, Transcript of spectrin beta, erythrocytic, humanhuman

TSL 1 (best)

Gene SPTB, Length 3,456 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTB-206ENST00000553938 DDX53Q86TM3 631 aaKnown RBP11.4□□□□□ -0.58
SPTB-206ENST00000553938 TCEAL8Q8IYN2 117 aa11.4□□□□□ -0.58
SPTB-206ENST00000553938 TREX2Q9BQ50 279 aaPredicted RBP11.4□□□□□ -0.58
SPTB-206ENST00000553938 TRMT61BQ9BVS5 477 aaKnown RBP11.4□□□□□ -0.58
SPTB-206ENST00000553938 SPATA9Q9BWV2 254 aa11.4□□□□□ -0.58
SPTB-206ENST00000553938 TTTY10Q9BZA0 68 aa11.4□□□□□ -0.58
SPTB-206ENST00000553938 BHLHE41Q9C0J9 482 aaPredicted RBP11.4□□□□□ -0.58
SPTB-206ENST00000553938 KLHL31Q9H511 634 aa11.4□□□□□ -0.58
SPTB-206ENST00000553938 BRF2Q9HAW0 419 aa11.4□□□□□ -0.58
SPTB-206ENST00000553938 TMEM5Q9Y2B1 443 aa11.4□□□□□ -0.58
SPTB-206ENST00000553938 KLK4Q9Y5K2 254 aa11.4□□□□□ -0.58
SPTB-206ENST00000553938 STON1Q9Y6Q2 735 aa11.4□□□□□ -0.58
SPTB-206ENST00000553938 FAM183AA6NL82 134 aa11.4□□□□□ -0.59
SPTB-206ENST00000553938 ITGA2P17301 1181 aa11.4□□□□□ -0.59
SPTB-206ENST00000553938 SOX6P35712 828 aa11.4□□□□□ -0.59
SPTB-206ENST00000553938 TM4SF4P48230 202 aa11.4□□□□□ -0.59
SPTB-206ENST00000553938 FABP5Q01469 135 aa11.4□□□□□ -0.59
SPTB-206ENST00000553938 CSTF1Q05048 431 aaKnown RBP11.4□□□□□ -0.59
SPTB-206ENST00000553938 SCRN3Q0VDG4 424 aa11.4□□□□□ -0.59
SPTB-206ENST00000553938 FUT5Q11128 374 aa11.4□□□□□ -0.59
SPTB-206ENST00000553938 FAM27D1Q5T7N8 215 aa11.4□□□□□ -0.59
SPTB-206ENST00000553938 C6orf120Q7Z4R8 191 aa11.4□□□□□ -0.59
SPTB-206ENST00000553938 FAM46DQ8NEK8 389 aa11.4□□□□□ -0.59
SPTB-206ENST00000553938 SENP5Q96HI0 755 aaPredicted RBP11.4□□□□□ -0.59
SPTB-206ENST00000553938 DIRAS2Q96HU8 199 aa11.4□□□□□ -0.59
SPTB-206ENST00000553938 DEFB118Q96PH6 123 aa11.4□□□□□ -0.59
SPTB-206ENST00000553938 TMED9Q9BVK6 235 aa11.4□□□□□ -0.59
SPTB-206ENST00000553938 TRPC4Q9UBN4 977 aa11.4□□□□□ -0.59
SPTB-206ENST00000553938 A4GNTQ9UNA3 340 aa11.4□□□□□ -0.59
SPTB-206ENST00000553938 ASF1AQ9Y294 204 aa11.4□□□□□ -0.59
SPTB-206ENST00000553938 HPGDSO60760 199 aa11.39□□□□□ -0.59
SPTB-206ENST00000553938 GNRH1P01148 92 aa11.39□□□□□ -0.59
SPTB-206ENST00000553938 GDI2P50395 445 aaKnown RBP11.39□□□□□ -0.59
SPTB-206ENST00000553938 ZNF791Q3KP31 576 aaPredicted RBP11.39□□□□□ -0.59
SPTB-206ENST00000553938 ZNF658BQ4V348 819 aaPredicted RBP11.39□□□□□ -0.59
SPTB-206ENST00000553938 LRFN4Q6PJG9 635 aa11.39□□□□□ -0.59
SPTB-206ENST00000553938 NR2C2APQ86WQ0 139 aa11.39□□□□□ -0.59
SPTB-206ENST00000553938 TEX46H3BTG2 121 aa11.39□□□□□ -0.59
SPTB-206ENST00000553938 GTPBP1O00178 669 aaKnown RBP11.39□□□□□ -0.59
SPTB-206ENST00000553938 SLC28A2O43868 658 aa11.39□□□□□ -0.59
SPTB-206ENST00000553938 MOSPD3O75425 235 aa11.39□□□□□ -0.59
SPTB-206ENST00000553938 SYPP08247 313 aa11.39□□□□□ -0.59
SPTB-206ENST00000553938 RHCEP18577 417 aa11.39□□□□□ -0.59
SPTB-206ENST00000553938 DGKGP49619 791 aa11.39□□□□□ -0.59
SPTB-206ENST00000553938 STXBP1P61764 594 aaKnown RBP11.39□□□□□ -0.59
SPTB-206ENST00000553938 GINS1Q14691 196 aa11.39□□□□□ -0.59
SPTB-206ENST00000553938 ZNF284Q2VY69 593 aa11.39□□□□□ -0.59
SPTB-206ENST00000553938 CDKL4Q5MAI5 379 aa11.39□□□□□ -0.59
SPTB-206ENST00000553938 REEP3Q6NUK4 255 aa11.39□□□□□ -0.59
SPTB-206ENST00000553938 NXPE4Q6UWF7 544 aa11.39□□□□□ -0.59
SPTB-206ENST00000553938 CREB3L2Q70SY1 520 aa11.39□□□□□ -0.59
SPTB-206ENST00000553938 PLCZ1Q86YW0 608 aa11.39□□□□□ -0.59
SPTB-206ENST00000553938 OTULINQ96BN8 352 aa11.39□□□□□ -0.59
SPTB-206ENST00000553938 C1GALT1C1Q96EU7 318 aa11.39□□□□□ -0.59
SPTB-206ENST00000553938 FCRL4Q96PJ5 515 aa11.39□□□□□ -0.59
SPTB-206ENST00000553938 REPIN1Q9BWE0 567 aaKnown RBP11.39□□□□□ -0.59
SPTB-206ENST00000553938 TMEM38AQ9H6F2 299 aa11.39□□□□□ -0.59
SPTB-206ENST00000553938 MN1Q10571 1320 aaPredicted RBP11.39□□□□□ -0.59
SPTB-206ENST00000553938 GRM6O15303 877 aa11.39□□□□□ -0.59
SPTB-206ENST00000553938 XPAP23025 273 aaPredicted RBP11.39□□□□□ -0.59
SPTB-206ENST00000553938 MMP12P39900 470 aa11.39□□□□□ -0.59
SPTB-206ENST00000553938 MAPK8P45983 427 aa11.39□□□□□ -0.59
SPTB-206ENST00000553938 RGS1Q08116 209 aa11.39□□□□□ -0.59
SPTB-206ENST00000553938 SREBF2Q12772 1141 aa11.39□□□□□ -0.59
SPTB-206ENST00000553938 DSG2Q14126 1118 aa11.39□□□□□ -0.59
SPTB-206ENST00000553938 SGCAQ16586 387 aa11.39□□□□□ -0.59
SPTB-206ENST00000553938 TMEM95Q3KNT9 176 aa11.39□□□□□ -0.59
SPTB-206ENST00000553938 RNASE12Q5GAN4 147 aaKnown RBP11.39□□□□□ -0.59
SPTB-206ENST00000553938 ZBTB37Q5TC79 503 aa11.39□□□□□ -0.59
SPTB-206ENST00000553938 SAXO2Q658L1 398 aa11.39□□□□□ -0.59
SPTB-206ENST00000553938 TPGS2Q68CL5 300 aa11.39□□□□□ -0.59
SPTB-206ENST00000553938 TRIM40Q6P9F5 258 aa11.39□□□□□ -0.59
SPTB-206ENST00000553938 CCDC149Q6ZUS6 474 aa11.39□□□□□ -0.59
SPTB-206ENST00000553938 OXR1Q8N573 874 aa11.39□□□□□ -0.59
SPTB-206ENST00000553938 TM4SF18Q96CE8 201 aa11.39□□□□□ -0.59
SPTB-206ENST00000553938 TBX5Q99593 518 aa11.39□□□□□ -0.59
SPTB-206ENST00000553938 ZNF416Q9BWM5 594 aa11.39□□□□□ -0.59
SPTB-206ENST00000553938 CPEB1Q9BZB8 566 aaKnown RBP11.39□□□□□ -0.59
SPTB-206ENST00000553938 ZDHHC5Q9C0B5 715 aa11.39□□□□□ -0.59
SPTB-206ENST00000553938 TBC1D17Q9HA65 648 aa11.39□□□□□ -0.59
SPTB-206ENST00000553938 FBXW2Q9UKT8 454 aa11.39□□□□□ -0.59
SPTB-206ENST00000553938 NUP210Q8TEM1 1887 aaPredicted RBP11.38□□□□□ -0.59
SPTB-206ENST00000553938 LOC102723532A0A0G2JNH3 316 aa11.38□□□□□ -0.59
SPTB-206ENST00000553938 CENPVL1A0A0U1RR11 272 aa11.38□□□□□ -0.59
SPTB-206ENST00000553938 CD8B2A6NJW9 211 aa11.38□□□□□ -0.59
SPTB-206ENST00000553938 B4DXG7 233 aa11.38□□□□□ -0.59
SPTB-206ENST00000553938 PRRT4C9JH25 899 aa11.38□□□□□ -0.59
SPTB-206ENST00000553938 SLC16A5O15375 505 aa11.38□□□□□ -0.59
SPTB-206ENST00000553938 POP7O75817 140 aaKnown RBP11.38□□□□□ -0.59
SPTB-206ENST00000553938 CHRM4P08173 479 aa11.38□□□□□ -0.59
SPTB-206ENST00000553938 CD8BP10966 210 aa11.38□□□□□ -0.59
SPTB-206ENST00000553938 OSMP13725 252 aa11.38□□□□□ -0.59
SPTB-206ENST00000553938 SELLP14151 372 aa11.38□□□□□ -0.59
SPTB-206ENST00000553938 PCSK2P16519 638 aa11.38□□□□□ -0.59
SPTB-206ENST00000553938 TBXA2RP21731 343 aa11.38□□□□□ -0.59
SPTB-206ENST00000553938 MYL9P24844 172 aa11.38□□□□□ -0.59
SPTB-206ENST00000553938 HMGA2P52926 109 aa11.38□□□□□ -0.59
SPTB-206ENST00000553938 GAS1P54826 345 aa11.38□□□□□ -0.59
SPTB-206ENST00000553938 C21orf58P58505 322 aa11.38□□□□□ -0.59
SPTB-206ENST00000553938 CCDC85BQ15834 202 aaPredicted RBP11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms