RNA–Protein interactions for RNA: ENST00000553186.5

RBFOX1-215, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-215ENST00000553186 OR52J3Q8NH60 311 aa18.18■□□□□ 0.5
RBFOX1-215ENST00000553186 VANGL1Q8TAA9 524 aaPredicted RBP18.18■□□□□ 0.5
RBFOX1-215ENST00000553186 MBOAT4Q96T53 435 aa18.18■□□□□ 0.5
RBFOX1-215ENST00000553186 APMAPQ9HDC9 416 aa18.18■□□□□ 0.5
RBFOX1-215ENST00000553186 FBXO34Q9NWN3 711 aa18.18■□□□□ 0.5
RBFOX1-215ENST00000553186 CTSFQ9UBX1 484 aa18.18■□□□□ 0.5
RBFOX1-215ENST00000553186 ACAD8Q9UKU7 415 aa18.18■□□□□ 0.5
RBFOX1-215ENST00000553186 HCN4Q9Y3Q4 1203 aa18.18■□□□□ 0.5
RBFOX1-215ENST00000553186 FER1L5A0AVI2 2057 aa18.18■□□□□ 0.5
RBFOX1-215ENST00000553186 GXYLT2A0PJZ3 443 aa18.18■□□□□ 0.5
RBFOX1-215ENST00000553186 SYT5O00445 386 aa18.18■□□□□ 0.5
RBFOX1-215ENST00000553186 CLIC3O95833 236 aa18.18■□□□□ 0.5
RBFOX1-215ENST00000553186 ALBP02768 609 aa18.18■□□□□ 0.5
RBFOX1-215ENST00000553186 MYF6P23409 242 aa18.18■□□□□ 0.5
RBFOX1-215ENST00000553186 RORAP35398 523 aa18.18■□□□□ 0.5
RBFOX1-215ENST00000553186 TRA2AQ13595 282 aaKnown RBP eCLIP18.18■□□□□ 0.5
RBFOX1-215ENST00000553186 GANABQ14697 944 aaKnown RBP18.18■□□□□ 0.5
RBFOX1-215ENST00000553186 MFSD4BQ5TF39 518 aa18.18■□□□□ 0.5
RBFOX1-215ENST00000553186 LAPTM4BQ86VI4 370 aa18.18■□□□□ 0.5
RBFOX1-215ENST00000553186 OR52P1PQ8NH57 321 aa18.18■□□□□ 0.5
RBFOX1-215ENST00000553186 MYCBPQ99417 103 aaPredicted RBP18.18■□□□□ 0.5
RBFOX1-215ENST00000553186 SLC7A5P2Q9GIP4 190 aa18.18■□□□□ 0.5
RBFOX1-215ENST00000553186 CCDC88CQ9P219 2028 aa18.18■□□□□ 0.5
RBFOX1-215ENST00000553186 TCRBV16S1A1N1A0A5B0 115 aa18.17■□□□□ 0.5
RBFOX1-215ENST00000553186 C17orf105B2RV13 164 aa18.17■□□□□ 0.5
RBFOX1-215ENST00000553186 PRAMEF2O60811 474 aa18.17■□□□□ 0.5
RBFOX1-215ENST00000553186 STX11O75558 287 aa18.17■□□□□ 0.5
RBFOX1-215ENST00000553186 SOX30O94993 753 aa18.17■□□□□ 0.5
RBFOX1-215ENST00000553186 AK1P00568 194 aa18.17■□□□□ 0.5
RBFOX1-215ENST00000553186 PRKAR1BP31321 381 aa18.17■□□□□ 0.5
RBFOX1-215ENST00000553186 MYBPC1Q00872 1141 aa18.17■□□□□ 0.5
RBFOX1-215ENST00000553186 BLMHQ13867 455 aa18.17■□□□□ 0.5
RBFOX1-215ENST00000553186 OR6T1Q8NGN1 323 aa18.17■□□□□ 0.5
RBFOX1-215ENST00000553186 C16orf52Q8NHV5 167 aa18.17■□□□□ 0.5
RBFOX1-215ENST00000553186 OR10A5Q9H207 317 aa18.17■□□□□ 0.5
RBFOX1-215ENST00000553186 RHCGQ9UBD6 479 aa18.17■□□□□ 0.5
RBFOX1-215ENST00000553186 FTSJ1Q9UET6 329 aa18.17■□□□□ 0.5
RBFOX1-215ENST00000553186 C3orf18Q9UK00 162 aa18.17■□□□□ 0.5
RBFOX1-215ENST00000553186 SLC9A8Q9Y2E8 581 aa18.17■□□□□ 0.5
RBFOX1-215ENST00000553186 IGLV3-12A0A075B6K2 115 aa18.17■□□□□ 0.5
RBFOX1-215ENST00000553186 CENPVL1A0A0U1RR11 272 aa18.17■□□□□ 0.5
RBFOX1-215ENST00000553186 AGAP5A6NIR3 686 aa18.17■□□□□ 0.5
RBFOX1-215ENST00000553186 MITFO75030 526 aaPredicted RBP18.17■□□□□ 0.5
RBFOX1-215ENST00000553186 IGFBP5P24593 272 aa18.17■□□□□ 0.5
RBFOX1-215ENST00000553186 PIGAP37287 484 aa18.17■□□□□ 0.5
RBFOX1-215ENST00000553186 POU6F2P78424 691 aaPredicted RBP18.17■□□□□ 0.5
RBFOX1-215ENST00000553186 SF3A2Q15428 464 aaKnown RBP18.17■□□□□ 0.5
RBFOX1-215ENST00000553186 EXOC3L2Q2M3D2 409 aa18.17■□□□□ 0.5
RBFOX1-215ENST00000553186 ZNF385CQ66K41 422 aaPredicted RBP18.17■□□□□ 0.5
RBFOX1-215ENST00000553186 DHRS4L2Q6PKH6 230 aa18.17■□□□□ 0.5
RBFOX1-215ENST00000553186 DEF8Q6ZN54 512 aa18.17■□□□□ 0.5
RBFOX1-215ENST00000553186 PPP1R3BQ86XI6 285 aa18.17■□□□□ 0.5
RBFOX1-215ENST00000553186 BMPERQ8N8U9 685 aa18.17■□□□□ 0.5
RBFOX1-215ENST00000553186 SENP5Q96HI0 755 aaPredicted RBP18.17■□□□□ 0.5
RBFOX1-215ENST00000553186 DHRS1Q96LJ7 313 aa18.17■□□□□ 0.5
RBFOX1-215ENST00000553186 TGIF2Q9GZN2 237 aa18.17■□□□□ 0.5
RBFOX1-215ENST00000553186 VN1R1Q9GZP7 353 aa18.17■□□□□ 0.5
RBFOX1-215ENST00000553186 NMNAT1Q9HAN9 279 aaPredicted RBP18.17■□□□□ 0.5
RBFOX1-215ENST00000553186 KCNK2O95069 426 aa18.16■□□□□ 0.5
RBFOX1-215ENST00000553186 CD59P13987 128 aa18.16■□□□□ 0.5
RBFOX1-215ENST00000553186 TNNI3P19429 210 aa18.16■□□□□ 0.5
RBFOX1-215ENST00000553186 RPS4Y1P22090 263 aaKnown RBP18.16■□□□□ 0.5
RBFOX1-215ENST00000553186 CSTF2P33240 577 aaKnown RBP eCLIP18.16■□□□□ 0.5
RBFOX1-215ENST00000553186 EPS8Q12929 822 aa18.16■□□□□ 0.5
RBFOX1-215ENST00000553186 KCNAB2Q13303 367 aa18.16■□□□□ 0.5
RBFOX1-215ENST00000553186 RFX4Q33E94 735 aa18.16■□□□□ 0.5
RBFOX1-215ENST00000553186 FIGNL1Q6PIW4 674 aa18.16■□□□□ 0.5
RBFOX1-215ENST00000553186 NPSR1Q6W5P4 371 aa18.16■□□□□ 0.5
RBFOX1-215ENST00000553186 ZNF619Q8N2I2 560 aa18.16■□□□□ 0.5
RBFOX1-215ENST00000553186 ARHGDIGQ99819 225 aa18.16■□□□□ 0.5
RBFOX1-215ENST00000553186 PNO1Q9NRX1 252 aaKnown RBP18.16■□□□□ 0.5
RBFOX1-215ENST00000553186 RXFP3Q9NSD7 469 aa18.16■□□□□ 0.5
RBFOX1-215ENST00000553186 FAM118AQ9NWS6 357 aa18.16■□□□□ 0.5
RBFOX1-215ENST00000553186 KCNE5Q9UJ90 142 aa18.16■□□□□ 0.5
RBFOX1-215ENST00000553186 A4GNTQ9UNA3 340 aa18.16■□□□□ 0.5
RBFOX1-215ENST00000553186 GPR55Q9Y2T6 319 aaPredicted RBP18.16■□□□□ 0.5
RBFOX1-215ENST00000553186 IFT52Q9Y366 437 aa18.16■□□□□ 0.5
RBFOX1-215ENST00000553186 PCDH17O14917 1159 aa18.15■□□□□ 0.5
RBFOX1-215ENST00000553186 KIAA0513O60268 411 aa18.15■□□□□ 0.5
RBFOX1-215ENST00000553186 GDF9O60383 454 aa18.15■□□□□ 0.5
RBFOX1-215ENST00000553186 BRINP1O60477 761 aa18.15■□□□□ 0.5
RBFOX1-215ENST00000553186 GADD45GO95257 159 aa18.15■□□□□ 0.5
RBFOX1-215ENST00000553186 ZNF806P0C7X5 589 aa18.15■□□□□ 0.5
RBFOX1-215ENST00000553186 CT45A8P0DMV1 189 aa18.15■□□□□ 0.5
RBFOX1-215ENST00000553186 CT45A9P0DMV2 189 aa18.15■□□□□ 0.5
RBFOX1-215ENST00000553186 FGF5P12034 268 aa18.15■□□□□ 0.5
RBFOX1-215ENST00000553186 ZNHIT3Q15649 155 aaPredicted RBP18.15■□□□□ 0.5
RBFOX1-215ENST00000553186 GPR68Q15743 365 aa18.15■□□□□ 0.5
RBFOX1-215ENST00000553186 NPTX1Q15818 432 aa18.15■□□□□ 0.5
RBFOX1-215ENST00000553186 MAPK14Q16539 360 aa18.15■□□□□ 0.5
RBFOX1-215ENST00000553186 MICAQ29983 383 aa18.15■□□□□ 0.5
RBFOX1-215ENST00000553186 NKAIN1Q4KMZ8 207 aa18.15■□□□□ 0.5
RBFOX1-215ENST00000553186 CT45A2Q5DJT8 189 aa18.15■□□□□ 0.5
RBFOX1-215ENST00000553186 COLEC12Q5KU26 742 aa18.15■□□□□ 0.5
RBFOX1-215ENST00000553186 TSPYL5Q86VY4 417 aaPredicted RBP18.15■□□□□ 0.5
RBFOX1-215ENST00000553186 BPHLQ86WA6 291 aaPredicted RBP18.15■□□□□ 0.5
RBFOX1-215ENST00000553186 TMEM151BQ8IW70 566 aa18.15■□□□□ 0.5
RBFOX1-215ENST00000553186 PEX5LQ8IYB4 626 aa18.15■□□□□ 0.5
RBFOX1-215ENST00000553186 PRSS58Q8IYP2 241 aa18.15■□□□□ 0.5
RBFOX1-215ENST00000553186 CLIP4Q8N3C7 705 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms