RNA–Protein interactions for RNA: ENST00000551320.1

PRPF40B-214, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-214ENST00000551320 PPP4R4Q6NUP7 873 aa6.19□□□□□ -1.42
PRPF40B-214ENST00000551320 ZNF474Q6S9Z5 364 aaPredicted RBP6.19□□□□□ -1.42
PRPF40B-214ENST00000551320 NPSR1Q6W5P4 371 aa6.19□□□□□ -1.42
PRPF40B-214ENST00000551320 SYDE1Q6ZW31 735 aaPredicted RBP6.19□□□□□ -1.42
PRPF40B-214ENST00000551320 TAOK1Q7L7X3 1001 aa6.19□□□□□ -1.42
PRPF40B-214ENST00000551320 COMMD6Q7Z4G1 85 aa6.19□□□□□ -1.42
PRPF40B-214ENST00000551320 MAATS1Q7Z4T9 603 aa6.19□□□□□ -1.42
PRPF40B-214ENST00000551320 ATG4DQ86TL0 474 aaPredicted RBP6.19□□□□□ -1.42
PRPF40B-214ENST00000551320 TAGAPQ8N103 731 aa6.19□□□□□ -1.42
PRPF40B-214ENST00000551320 ZCCHC7Q8N3Z6 543 aaKnown RBP6.19□□□□□ -1.42
PRPF40B-214ENST00000551320 SLC15A4Q8N697 577 aa6.19□□□□□ -1.42
PRPF40B-214ENST00000551320 CEP112Q8N8E3 955 aa6.19□□□□□ -1.42
PRPF40B-214ENST00000551320 LRRN4CLQ8ND94 238 aa6.19□□□□□ -1.42
PRPF40B-214ENST00000551320 SRFBP1Q8NEF9 429 aaKnown RBP6.19□□□□□ -1.42
PRPF40B-214ENST00000551320 OR4K14Q8NGD5 310 aa6.19□□□□□ -1.42
PRPF40B-214ENST00000551320 MBD3L2Q8NHZ7 208 aaPredicted RBP6.19□□□□□ -1.42
PRPF40B-214ENST00000551320 FBXO25Q8TCJ0 367 aa6.19□□□□□ -1.42
PRPF40B-214ENST00000551320 UBTD2Q8WUN7 234 aa6.19□□□□□ -1.42
PRPF40B-214ENST00000551320 SMPDL3BQ92485 455 aa6.19□□□□□ -1.42
PRPF40B-214ENST00000551320 ATP6V1E2Q96A05 226 aa6.19□□□□□ -1.42
PRPF40B-214ENST00000551320 TM4SF18Q96CE8 201 aa6.19□□□□□ -1.42
PRPF40B-214ENST00000551320 ARSGQ96EG1 525 aa6.19□□□□□ -1.42
PRPF40B-214ENST00000551320 HSPBAP1Q96EW2 488 aa6.19□□□□□ -1.42
PRPF40B-214ENST00000551320 ZNF845Q96IR2 970 aaPredicted RBP6.19□□□□□ -1.42
PRPF40B-214ENST00000551320 FAM111AQ96PZ2 611 aa6.19□□□□□ -1.42
PRPF40B-214ENST00000551320 ADOQ96SZ5 270 aa6.19□□□□□ -1.42
PRPF40B-214ENST00000551320 NAPGQ99747 312 aaPredicted RBP6.19□□□□□ -1.42
PRPF40B-214ENST00000551320 ERP44Q9BS26 406 aa6.19□□□□□ -1.42
PRPF40B-214ENST00000551320 SSBP4Q9BWG4 385 aaPredicted RBP6.19□□□□□ -1.42
PRPF40B-214ENST00000551320 PITHD1Q9GZP4 211 aaPredicted RBP6.19□□□□□ -1.42
PRPF40B-214ENST00000551320 DDX31Q9H8H2 851 aaKnown RBP6.19□□□□□ -1.42
PRPF40B-214ENST00000551320 NMRAL1Q9HBL8 299 aa6.19□□□□□ -1.42
PRPF40B-214ENST00000551320 TAS2R10Q9NYW0 307 aa6.19□□□□□ -1.42
PRPF40B-214ENST00000551320 MAT2BQ9NZL9 334 aa6.19□□□□□ -1.42
PRPF40B-214ENST00000551320 JKAMPQ9P055 326 aa6.19□□□□□ -1.42
PRPF40B-214ENST00000551320 ZNF629Q9UEG4 869 aaPredicted RBP6.19□□□□□ -1.42
PRPF40B-214ENST00000551320 CES1P1Q9UKY3 287 aa6.19□□□□□ -1.42
PRPF40B-214ENST00000551320 SLC12A4Q9UP95 1085 aa6.19□□□□□ -1.42
PRPF40B-214ENST00000551320 ACOT9Q9Y305 439 aa6.19□□□□□ -1.42
PRPF40B-214ENST00000551320 CORINQ9Y5Q5 1042 aa6.19□□□□□ -1.42
PRPF40B-214ENST00000551320 SAR1BQ9Y6B6 198 aa6.19□□□□□ -1.42
PRPF40B-214ENST00000551320 HIVEP2P31629 2446 aa6.19□□□□□ -1.42
PRPF40B-214ENST00000551320 A0A096LPK6 155 aa6.18□□□□□ -1.42
PRPF40B-214ENST00000551320 TNFSF12-TNFSF13A0A0A6YY99 330 aa6.18□□□□□ -1.42
PRPF40B-214ENST00000551320 A0A1W2PNV4 684 aa6.18□□□□□ -1.42
PRPF40B-214ENST00000551320 PRAMEF25A6NGN4 478 aa6.18□□□□□ -1.42
PRPF40B-214ENST00000551320 CD8B2A6NJW9 211 aa6.18□□□□□ -1.42
PRPF40B-214ENST00000551320 DEFB108AA8MXU0 73 aa6.18□□□□□ -1.42
PRPF40B-214ENST00000551320 CES2O00748 559 aa6.18□□□□□ -1.42
PRPF40B-214ENST00000551320 ZSCAN12O43309 604 aa6.18□□□□□ -1.42
PRPF40B-214ENST00000551320 ZIC3O60481 467 aa6.18□□□□□ -1.42
PRPF40B-214ENST00000551320 ERN1O75460 977 aaKnown RBP6.18□□□□□ -1.42
PRPF40B-214ENST00000551320 PPM1BO75688 479 aa6.18□□□□□ -1.42
PRPF40B-214ENST00000551320 TNFSF13O75888 250 aa6.18□□□□□ -1.42
PRPF40B-214ENST00000551320 ALDOAP04075 364 aaKnown RBP6.18□□□□□ -1.42
PRPF40B-214ENST00000551320 PORP16435 677 aaPredicted RBP6.18□□□□□ -1.42
PRPF40B-214ENST00000551320 KRT15P19012 456 aa6.18□□□□□ -1.42
PRPF40B-214ENST00000551320 PTNP21246 168 aa6.18□□□□□ -1.42
PRPF40B-214ENST00000551320 GSTM2P28161 218 aa6.18□□□□□ -1.42
PRPF40B-214ENST00000551320 NTF4P34130 210 aa6.18□□□□□ -1.42
PRPF40B-214ENST00000551320 PIK3CBP42338 1070 aa6.18□□□□□ -1.42
PRPF40B-214ENST00000551320 RFX3P48380 749 aa6.18□□□□□ -1.42
PRPF40B-214ENST00000551320 EMDP50402 254 aa6.18□□□□□ -1.42
PRPF40B-214ENST00000551320 HTR6P50406 440 aa6.18□□□□□ -1.42
PRPF40B-214ENST00000551320 LHX2P50458 406 aa6.18□□□□□ -1.42
PRPF40B-214ENST00000551320 CCNG1P51959 295 aa6.18□□□□□ -1.42
PRPF40B-214ENST00000551320 CLDN18P56856 261 aa6.18□□□□□ -1.42
PRPF40B-214ENST00000551320 CLDN20P56880 219 aa6.18□□□□□ -1.42
PRPF40B-214ENST00000551320 B3GALT5-AS1P59052 145 aa6.18□□□□□ -1.42
PRPF40B-214ENST00000551320 ETF1P62495 437 aaKnown RBP6.18□□□□□ -1.42
PRPF40B-214ENST00000551320 PLCXD2Q0VAA5 305 aa6.18□□□□□ -1.42
PRPF40B-214ENST00000551320 GALNT1Q10472 559 aaPredicted RBP6.18□□□□□ -1.42
PRPF40B-214ENST00000551320 TRAF3Q13114 568 aa6.18□□□□□ -1.42
PRPF40B-214ENST00000551320 CALCOCO2Q13137 446 aa6.18□□□□□ -1.42
PRPF40B-214ENST00000551320 TSC22D1Q15714 1073 aa6.18□□□□□ -1.42
PRPF40B-214ENST00000551320 FBXL19-AS1Q494R0 122 aa6.18□□□□□ -1.42
PRPF40B-214ENST00000551320 TECRLQ5HYJ1 363 aa6.18□□□□□ -1.42
PRPF40B-214ENST00000551320 TEX35Q5T0J7 233 aa6.18□□□□□ -1.42
PRPF40B-214ENST00000551320 OR52E8Q6IFG1 317 aa6.18□□□□□ -1.42
PRPF40B-214ENST00000551320 CDPF1Q6NVV7 123 aa6.18□□□□□ -1.42
PRPF40B-214ENST00000551320 LETMD1Q6P1Q0 360 aa6.18□□□□□ -1.42
PRPF40B-214ENST00000551320 BIVMQ86UB2 503 aa6.18□□□□□ -1.42
PRPF40B-214ENST00000551320 NUDT13Q86X67 352 aa6.18□□□□□ -1.42
PRPF40B-214ENST00000551320 GRAMD2AQ8IUY3 354 aa6.18□□□□□ -1.42
PRPF40B-214ENST00000551320 C1orf52Q8N6N3 182 aaKnown RBP6.18□□□□□ -1.42
PRPF40B-214ENST00000551320 ZNF610Q8N9Z0 462 aa6.18□□□□□ -1.42
PRPF40B-214ENST00000551320 OR4F6Q8NGB9 312 aa6.18□□□□□ -1.42
PRPF40B-214ENST00000551320 OR9A2Q8NGT5 310 aa6.18□□□□□ -1.42
PRPF40B-214ENST00000551320 CDC26Q8NHZ8 85 aa6.18□□□□□ -1.42
PRPF40B-214ENST00000551320 FBLIM1Q8WUP2 373 aa6.18□□□□□ -1.42
PRPF40B-214ENST00000551320 CDKL2Q92772 493 aa6.18□□□□□ -1.42
PRPF40B-214ENST00000551320 NEUROG1Q92886 237 aa6.18□□□□□ -1.42
PRPF40B-214ENST00000551320 UBE2E3Q969T4 207 aa6.18□□□□□ -1.42
PRPF40B-214ENST00000551320 ISL2Q96A47 359 aa6.18□□□□□ -1.42
PRPF40B-214ENST00000551320 EXOSC8Q96B26 276 aaKnown RBP6.18□□□□□ -1.42
PRPF40B-214ENST00000551320 KLHL29Q96CT2 875 aa6.18□□□□□ -1.42
PRPF40B-214ENST00000551320 NTNG2Q96CW9 530 aa6.18□□□□□ -1.42
PRPF40B-214ENST00000551320 MBD6Q96DN6 1003 aa6.18□□□□□ -1.42
PRPF40B-214ENST00000551320 STARD4Q96DR4 205 aa6.18□□□□□ -1.42
PRPF40B-214ENST00000551320 CNRIP1Q96F85 164 aaPredicted RBP6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms