RNA–Protein interactions for RNA: ENST00000551246.1

LSM3P2-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM3P2, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P2-201ENST00000551246 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.98□□□□□ -1.61
LSM3P2-201ENST00000551246 CHST8Q9H2A9 424 aa4.98□□□□□ -1.61
LSM3P2-201ENST00000551246 MFSD1Q9H3U5 465 aa4.98□□□□□ -1.61
LSM3P2-201ENST00000551246 CDCP1Q9H5V8 836 aa4.98□□□□□ -1.61
LSM3P2-201ENST00000551246 OPA3Q9H6K4 179 aa4.98□□□□□ -1.61
LSM3P2-201ENST00000551246 REEP1Q9H902 201 aa4.98□□□□□ -1.61
LSM3P2-201ENST00000551246 AGO3Q9H9G7 860 aaKnown RBP4.98□□□□□ -1.61
LSM3P2-201ENST00000551246 PLEKHA1Q9HB21 404 aa4.98□□□□□ -1.61
LSM3P2-201ENST00000551246 SLC6A20Q9NP91 592 aa4.98□□□□□ -1.61
LSM3P2-201ENST00000551246 FGF20Q9NP95 211 aaPredicted RBP4.98□□□□□ -1.61
LSM3P2-201ENST00000551246 ZFP57Q9NU63 452 aa4.98□□□□□ -1.61
LSM3P2-201ENST00000551246 OSER1Q9NX31 292 aa4.98□□□□□ -1.61
LSM3P2-201ENST00000551246 IMPAD1Q9NX62 359 aa4.98□□□□□ -1.61
LSM3P2-201ENST00000551246 MPP6Q9NZW5 540 aa4.98□□□□□ -1.61
LSM3P2-201ENST00000551246 MGAT4CQ9UBM8 478 aa4.98□□□□□ -1.61
LSM3P2-201ENST00000551246 AFF4Q9UHB7 1163 aaKnown RBP4.98□□□□□ -1.61
LSM3P2-201ENST00000551246 ZNF222Q9UK12 451 aa4.98□□□□□ -1.61
LSM3P2-201ENST00000551246 ACSL6Q9UKU0 697 aa4.98□□□□□ -1.61
LSM3P2-201ENST00000551246 MED16Q9Y2X0 877 aa4.98□□□□□ -1.61
LSM3P2-201ENST00000551246 PLEKHM1Q9Y4G2 1056 aa4.98□□□□□ -1.61
LSM3P2-201ENST00000551246 COL4A4P53420 1690 aaPredicted RBP4.98□□□□□ -1.61
LSM3P2-201ENST00000551246 BRCA1P38398 1863 aaKnown RBP4.98□□□□□ -1.61
LSM3P2-201ENST00000551246 ZNF831Q5JPB2 1677 aa4.97□□□□□ -1.61
LSM3P2-201ENST00000551246 A0A1B0GUH1 482 aa4.97□□□□□ -1.61
LSM3P2-201ENST00000551246 A0A1B0GV90 55 aa4.97□□□□□ -1.61
LSM3P2-201ENST00000551246 A0A1W2PPC1 479 aa4.97□□□□□ -1.61
LSM3P2-201ENST00000551246 TMEM129A0AVI4 362 aa4.97□□□□□ -1.61
LSM3P2-201ENST00000551246 ANKRD61A6NGH8 418 aa4.97□□□□□ -1.61
LSM3P2-201ENST00000551246 OR6C75A6NL08 312 aa4.97□□□□□ -1.61
LSM3P2-201ENST00000551246 DDX39AO00148 427 aaKnown RBP4.97□□□□□ -1.61
LSM3P2-201ENST00000551246 ARVCFO00192 962 aa4.97□□□□□ -1.61
LSM3P2-201ENST00000551246 PSMD9O00233 223 aa4.97□□□□□ -1.61
LSM3P2-201ENST00000551246 CLDN4O14493 209 aa4.97□□□□□ -1.61
LSM3P2-201ENST00000551246 CTDSPLO15194 276 aa4.97□□□□□ -1.61
LSM3P2-201ENST00000551246 SEMA7AO75326 666 aa4.97□□□□□ -1.61
LSM3P2-201ENST00000551246 ENTPD6O75354 484 aa4.97□□□□□ -1.61
LSM3P2-201ENST00000551246 ECI2O75521 394 aa4.97□□□□□ -1.61
LSM3P2-201ENST00000551246 GCM2O75603 506 aaPredicted RBP4.97□□□□□ -1.61
LSM3P2-201ENST00000551246 GRAP2O75791 330 aa4.97□□□□□ -1.61
LSM3P2-201ENST00000551246 KCNK5O95279 499 aa4.97□□□□□ -1.61
LSM3P2-201ENST00000551246 PAPLNO95428 1278 aa4.97□□□□□ -1.61
LSM3P2-201ENST00000551246 C22orf31O95567 290 aa4.97□□□□□ -1.61
LSM3P2-201ENST00000551246 LATS1O95835 1130 aa4.97□□□□□ -1.61
LSM3P2-201ENST00000551246 PAK4O96013 591 aaPredicted RBP4.97□□□□□ -1.61
LSM3P2-201ENST00000551246 CRYABP02511 175 aaKnown RBP4.97□□□□□ -1.61
LSM3P2-201ENST00000551246 HLA-DOAP06340 250 aa4.97□□□□□ -1.61
LSM3P2-201ENST00000551246 ZDHHC11BP0C7U3 371 aa4.97□□□□□ -1.61
LSM3P2-201ENST00000551246 SLC2A1P11166 492 aa4.97□□□□□ -1.61
LSM3P2-201ENST00000551246 RNH1P13489 461 aaKnown RBP4.97□□□□□ -1.61
LSM3P2-201ENST00000551246 NDUFB7P17568 137 aa4.97□□□□□ -1.61
LSM3P2-201ENST00000551246 ERCC2P18074 760 aa4.97□□□□□ -1.61
LSM3P2-201ENST00000551246 ADCYAP1P18509 176 aa4.97□□□□□ -1.61
LSM3P2-201ENST00000551246 OGNP20774 298 aaKnown RBP4.97□□□□□ -1.61
LSM3P2-201ENST00000551246 UQCRC2P22695 453 aa4.97□□□□□ -1.61
LSM3P2-201ENST00000551246 AKT1P31749 480 aa4.97□□□□□ -1.61
LSM3P2-201ENST00000551246 S100A11P31949 105 aa4.97□□□□□ -1.61
LSM3P2-201ENST00000551246 MAS1LP35410 378 aa4.97□□□□□ -1.61
LSM3P2-201ENST00000551246 THBS2P35442 1172 aa4.97□□□□□ -1.61
LSM3P2-201ENST00000551246 GDNFP39905 211 aa4.97□□□□□ -1.61
LSM3P2-201ENST00000551246 ASMTP46597 345 aa4.97□□□□□ -1.61
LSM3P2-201ENST00000551246 PIK3CGP48736 1102 aa4.97□□□□□ -1.61
LSM3P2-201ENST00000551246 XKP51811 444 aa4.97□□□□□ -1.61
LSM3P2-201ENST00000551246 ERVPABLB-1P60509 514 aa4.97□□□□□ -1.61
LSM3P2-201ENST00000551246 SEC61A1P61619 476 aaKnown RBP4.97□□□□□ -1.61
LSM3P2-201ENST00000551246 RPS7P62081 194 aaKnown RBP4.97□□□□□ -1.61
LSM3P2-201ENST00000551246 ERVK-25P63136 954 aa4.97□□□□□ -1.61
LSM3P2-201ENST00000551246 UBE2IP63279 158 aaKnown RBP4.97□□□□□ -1.61
LSM3P2-201ENST00000551246 HSD11B2P80365 405 aa4.97□□□□□ -1.61
LSM3P2-201ENST00000551246 RBBP4Q09028 425 aa4.97□□□□□ -1.61
LSM3P2-201ENST00000551246 MTAPQ13126 283 aa4.97□□□□□ -1.61
LSM3P2-201ENST00000551246 PICALMQ13492 652 aa4.97□□□□□ -1.61
LSM3P2-201ENST00000551246 KLF9Q13886 244 aaPredicted RBP4.97□□□□□ -1.61
LSM3P2-201ENST00000551246 GTF2H3Q13889 308 aa4.97□□□□□ -1.61
LSM3P2-201ENST00000551246 MED22Q15528 200 aa4.97□□□□□ -1.61
LSM3P2-201ENST00000551246 SF1Q15637 639 aaKnown RBP4.97□□□□□ -1.61
LSM3P2-201ENST00000551246 VMACQ2NL98 169 aa4.97□□□□□ -1.61
LSM3P2-201ENST00000551246 SLC25A52Q3SY17 297 aa4.97□□□□□ -1.61
LSM3P2-201ENST00000551246 NOMO2Q5JPE7 1267 aa4.97□□□□□ -1.61
LSM3P2-201ENST00000551246 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.97□□□□□ -1.61
LSM3P2-201ENST00000551246 RAET1GQ6H3X3 334 aa4.97□□□□□ -1.61
LSM3P2-201ENST00000551246 CDC42EP5Q6NZY7 148 aa4.97□□□□□ -1.61
LSM3P2-201ENST00000551246 MZT2AQ6P582 158 aa4.97□□□□□ -1.61
LSM3P2-201ENST00000551246 HHIPL2Q6UWX4 724 aa4.97□□□□□ -1.61
LSM3P2-201ENST00000551246 ABHD15Q6UXT9 468 aa4.97□□□□□ -1.61
LSM3P2-201ENST00000551246 Q6ZTK2 550 aa4.97□□□□□ -1.61
LSM3P2-201ENST00000551246 TMPRSS11FQ6ZWK6 438 aa4.97□□□□□ -1.61
LSM3P2-201ENST00000551246 PDZD4Q76G19 769 aaPredicted RBP4.97□□□□□ -1.61
LSM3P2-201ENST00000551246 ANKRD33Q7Z3H0 272 aa4.97□□□□□ -1.61
LSM3P2-201ENST00000551246 TMEM17Q86X19 198 aa4.97□□□□□ -1.61
LSM3P2-201ENST00000551246 SERPINA12Q8IW75 414 aa4.97□□□□□ -1.61
LSM3P2-201ENST00000551246 NAGSQ8N159 534 aa4.97□□□□□ -1.61
LSM3P2-201ENST00000551246 SYNPOQ8N3V7 929 aa4.97□□□□□ -1.61
LSM3P2-201ENST00000551246 NPWQ8N729 165 aa4.97□□□□□ -1.61
LSM3P2-201ENST00000551246 POMGNT2Q8NAT1 580 aa4.97□□□□□ -1.61
LSM3P2-201ENST00000551246 FAM98AQ8NCA5 519 aaKnown RBP4.97□□□□□ -1.61
LSM3P2-201ENST00000551246 GPR26Q8NDV2 337 aa4.97□□□□□ -1.61
LSM3P2-201ENST00000551246 PPHLN1Q8NEY8 458 aaKnown RBP4.97□□□□□ -1.61
LSM3P2-201ENST00000551246 PXT1Q8NFP0 134 aa4.97□□□□□ -1.61
LSM3P2-201ENST00000551246 OR10G2Q8NGC3 310 aa4.97□□□□□ -1.61
LSM3P2-201ENST00000551246 OR56A4Q8NGH8 313 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms