RNA–Protein interactions for RNA: ENST00000550219.1

NUP188-211, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 886 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-211ENST00000550219 SLC6A15Q9H2J7 730 aa12.32□□□□□ -0.44
NUP188-211ENST00000550219 REEP4Q9H6H4 257 aa12.32□□□□□ -0.44
NUP188-211ENST00000550219 ZNF703Q9H7S9 590 aaPredicted RBP12.32□□□□□ -0.44
NUP188-211ENST00000550219 WDR41Q9HAD4 459 aa12.32□□□□□ -0.44
NUP188-211ENST00000550219 TAS2R7Q9NYW3 318 aa12.32□□□□□ -0.44
NUP188-211ENST00000550219 SPRR3Q9UBC9 169 aa12.32□□□□□ -0.44
NUP188-211ENST00000550219 ATP6V1HQ9UI12 483 aa12.32□□□□□ -0.44
NUP188-211ENST00000550219 FAM215AQ9Y5M1 114 aa12.32□□□□□ -0.44
NUP188-211ENST00000550219 PKDREJQ9NTG1 2253 aa12.32□□□□□ -0.44
NUP188-211ENST00000550219 GTF3C1Q12789 2109 aa12.32□□□□□ -0.44
NUP188-211ENST00000550219 PDZD2O15018 2839 aa12.31□□□□□ -0.44
NUP188-211ENST00000550219 A0A0G2JNJ9 132 aa12.31□□□□□ -0.44
NUP188-211ENST00000550219 A0A1W2PS29 197 aa12.31□□□□□ -0.44
NUP188-211ENST00000550219 LRRC3CA6NJW4 275 aa12.31□□□□□ -0.44
NUP188-211ENST00000550219 SCAMP2O15127 329 aaKnown RBP12.31□□□□□ -0.44
NUP188-211ENST00000550219 PGRMC2O15173 223 aa12.31□□□□□ -0.44
NUP188-211ENST00000550219 SLC22A2O15244 555 aa12.31□□□□□ -0.44
NUP188-211ENST00000550219 GPR75O95800 540 aa12.31□□□□□ -0.44
NUP188-211ENST00000550219 GLI4P10075 376 aa12.31□□□□□ -0.44
NUP188-211ENST00000550219 IGFBP2P18065 325 aa12.31□□□□□ -0.44
NUP188-211ENST00000550219 CAPN3P20807 821 aa12.31□□□□□ -0.44
NUP188-211ENST00000550219 ENDOUP21128 410 aaKnown RBP12.31□□□□□ -0.44
NUP188-211ENST00000550219 IL12AP29459 219 aa12.31□□□□□ -0.44
NUP188-211ENST00000550219 SSTR4P31391 388 aa12.31□□□□□ -0.44
NUP188-211ENST00000550219 RPL3P39023 403 aaKnown RBP12.31□□□□□ -0.44
NUP188-211ENST00000550219 ZFP36L2P47974 494 aaKnown RBP12.31□□□□□ -0.44
NUP188-211ENST00000550219 TRPC1P48995 793 aa12.31□□□□□ -0.44
NUP188-211ENST00000550219 STX1BP61266 288 aa12.31□□□□□ -0.44
NUP188-211ENST00000550219 EBPQ15125 230 aaKnown RBP12.31□□□□□ -0.44
NUP188-211ENST00000550219 RPS6KA2Q15349 733 aa12.31□□□□□ -0.44
NUP188-211ENST00000550219 SPRED3Q2MJR0 410 aa12.31□□□□□ -0.44
NUP188-211ENST00000550219 RTL6Q6ICC9 239 aa12.31□□□□□ -0.44
NUP188-211ENST00000550219 SLC48A1Q6P1K1 146 aa12.31□□□□□ -0.44
NUP188-211ENST00000550219 TMEM64Q6YI46 380 aa12.31□□□□□ -0.44
NUP188-211ENST00000550219 R3HCC1LQ7Z5L2 792 aaKnown RBP12.31□□□□□ -0.44
NUP188-211ENST00000550219 WDR53Q7Z5U6 358 aaPredicted RBP12.31□□□□□ -0.44
NUP188-211ENST00000550219 MTDHQ86UE4 582 aaKnown RBP12.31□□□□□ -0.44
NUP188-211ENST00000550219 FUNDC1Q8IVP5 155 aa12.31□□□□□ -0.44
NUP188-211ENST00000550219 FBXW8Q8N3Y1 598 aa12.31□□□□□ -0.44
NUP188-211ENST00000550219 KRTCAP2Q8N6L1 136 aa12.31□□□□□ -0.44
NUP188-211ENST00000550219 GLB1L3Q8NCI6 653 aaPredicted RBP12.31□□□□□ -0.44
NUP188-211ENST00000550219 C7orf57Q8NEG2 295 aa12.31□□□□□ -0.44
NUP188-211ENST00000550219 PAQR8Q8TEZ7 354 aa12.31□□□□□ -0.44
NUP188-211ENST00000550219 UCN3Q969E3 161 aa12.31□□□□□ -0.44
NUP188-211ENST00000550219 TESCQ96BS2 214 aa12.31□□□□□ -0.44
NUP188-211ENST00000550219 COQ8BQ96D53 544 aa12.31□□□□□ -0.44
NUP188-211ENST00000550219 TREX2Q9BQ50 279 aaPredicted RBP12.31□□□□□ -0.44
NUP188-211ENST00000550219 DOHHQ9BU89 302 aa12.31□□□□□ -0.44
NUP188-211ENST00000550219 DPY30Q9C005 99 aa12.31□□□□□ -0.44
NUP188-211ENST00000550219 Q9UFV3 132 aa12.31□□□□□ -0.44
NUP188-211ENST00000550219 A0A1B0GVC2 190 aa12.3□□□□□ -0.44
NUP188-211ENST00000550219 AKAP10O43572 662 aa12.3□□□□□ -0.44
NUP188-211ENST00000550219 WDR1O75083 606 aa12.3□□□□□ -0.44
NUP188-211ENST00000550219 SLC22A3O75751 556 aa12.3□□□□□ -0.44
NUP188-211ENST00000550219 FBXO45P0C2W1 286 aa12.3□□□□□ -0.44
NUP188-211ENST00000550219 RFPL3SP0C7P2 107 aa12.3□□□□□ -0.44
NUP188-211ENST00000550219 GDF1P27539 372 aa12.3□□□□□ -0.44
NUP188-211ENST00000550219 HPCAL1P37235 193 aa12.3□□□□□ -0.44
NUP188-211ENST00000550219 ADH7P40394 386 aa12.3□□□□□ -0.44
NUP188-211ENST00000550219 CLNS1AP54105 237 aaKnown RBP12.3□□□□□ -0.44
NUP188-211ENST00000550219 PRSS53Q2L4Q9 553 aa12.3□□□□□ -0.44
NUP188-211ENST00000550219 HYAL4Q2M3T9 481 aa12.3□□□□□ -0.44
NUP188-211ENST00000550219 C6orf163Q5TEZ5 329 aa12.3□□□□□ -0.44
NUP188-211ENST00000550219 FAM91A1Q658Y4 838 aa12.3□□□□□ -0.44
NUP188-211ENST00000550219 OR52E8Q6IFG1 317 aa12.3□□□□□ -0.44
NUP188-211ENST00000550219 DMRTC2Q8IXT2 367 aaPredicted RBP12.3□□□□□ -0.44
NUP188-211ENST00000550219 DIO2Q92813 273 aa12.3□□□□□ -0.44
NUP188-211ENST00000550219 ZNF597Q96LX8 424 aa12.3□□□□□ -0.44
NUP188-211ENST00000550219 CCDC106Q9BWC9 280 aa12.3□□□□□ -0.44
NUP188-211ENST00000550219 SH2D2AQ9NP31 389 aa12.3□□□□□ -0.44
NUP188-211ENST00000550219 ZFP64Q9NPA5 681 aa12.3□□□□□ -0.44
NUP188-211ENST00000550219 B4GALT7Q9UBV7 327 aa12.3□□□□□ -0.44
NUP188-211ENST00000550219 C15orf38-AP3S2A0A0A6YYH1 394 aa12.29□□□□□ -0.44
NUP188-211ENST00000550219 FAM234BA2RU67 622 aa12.29□□□□□ -0.44
NUP188-211ENST00000550219 SUSD5O60279 629 aa12.29□□□□□ -0.44
NUP188-211ENST00000550219 HCN1O60741 890 aa12.29□□□□□ -0.44
NUP188-211ENST00000550219 DCTN3O75935 186 aa12.29□□□□□ -0.44
NUP188-211ENST00000550219 CLPSP04118 112 aa12.29□□□□□ -0.44
NUP188-211ENST00000550219 PIK3R1P27986 724 aa12.29□□□□□ -0.44
NUP188-211ENST00000550219 NME5P56597 212 aa12.29□□□□□ -0.44
NUP188-211ENST00000550219 SLC37A1P57057 533 aa12.29□□□□□ -0.44
NUP188-211ENST00000550219 FBXW4P57775 412 aa12.29□□□□□ -0.44
NUP188-211ENST00000550219 KLF10Q13118 480 aa12.29□□□□□ -0.44
NUP188-211ENST00000550219 BIKQ13323 160 aa12.29□□□□□ -0.44
NUP188-211ENST00000550219 SNTB1Q13884 538 aaKnown RBP12.29□□□□□ -0.44
NUP188-211ENST00000550219 CEBPEQ15744 281 aa12.29□□□□□ -0.44
NUP188-211ENST00000550219 DPY19L1Q2PZI1 675 aa12.29□□□□□ -0.44
NUP188-211ENST00000550219 ZNF385BQ569K4 471 aa12.29□□□□□ -0.44
NUP188-211ENST00000550219 HLA-DQA1Q5Y7H0 255 aa12.29□□□□□ -0.44
NUP188-211ENST00000550219 BLOC1S3Q6QNY0 202 aa12.29□□□□□ -0.44
NUP188-211ENST00000550219 LIX1LQ8IVB5 337 aa12.29□□□□□ -0.44
NUP188-211ENST00000550219 GALNT12Q8IXK2 581 aa12.29□□□□□ -0.44
NUP188-211ENST00000550219 PRR22Q8IZ63 422 aa12.29□□□□□ -0.44
NUP188-211ENST00000550219 TAGAPQ8N103 731 aa12.29□□□□□ -0.44
NUP188-211ENST00000550219 SLC15A4Q8N697 577 aa12.29□□□□□ -0.44
NUP188-211ENST00000550219 OR8J2Q8NGG1 315 aa12.29□□□□□ -0.44
NUP188-211ENST00000550219 OR9I1Q8NGQ6 314 aa12.29□□□□□ -0.44
NUP188-211ENST00000550219 CDC26Q8NHZ8 85 aa12.29□□□□□ -0.44
NUP188-211ENST00000550219 TSPEARQ8WU66 669 aa12.29□□□□□ -0.44
NUP188-211ENST00000550219 NUDT8Q8WV74 236 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms