RNA–Protein interactions for RNA: ENST00000549271.1

DDX54-206, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-206ENST00000549271 CCDC153Q494R4 210 aa11.07□□□□□ -0.64
DDX54-206ENST00000549271 HLA-DQA1Q5Y7H0 255 aa11.07□□□□□ -0.64
DDX54-206ENST00000549271 SLC48A1Q6P1K1 146 aa11.07□□□□□ -0.64
DDX54-206ENST00000549271 SCIMPQ6UWF3 145 aa11.07□□□□□ -0.64
DDX54-206ENST00000549271 C4orf33Q8N1A6 199 aa11.07□□□□□ -0.64
DDX54-206ENST00000549271 MEIOBQ8N635 442 aa11.07□□□□□ -0.64
DDX54-206ENST00000549271 CCDC126Q96EE4 140 aa11.07□□□□□ -0.64
DDX54-206ENST00000549271 C11orf24Q96F05 449 aaPredicted RBP11.07□□□□□ -0.64
DDX54-206ENST00000549271 OR10A5Q9H207 317 aa11.07□□□□□ -0.64
DDX54-206ENST00000549271 CALHM2Q9HA72 323 aa11.07□□□□□ -0.64
DDX54-206ENST00000549271 TNFRSF12AQ9NP84 129 aa11.07□□□□□ -0.64
DDX54-206ENST00000549271 MID1IP1Q9NPA3 183 aa11.07□□□□□ -0.64
DDX54-206ENST00000549271 OXSMQ9NWU1 459 aa11.07□□□□□ -0.64
DDX54-206ENST00000549271 MED12Q93074 2177 aa11.07□□□□□ -0.64
DDX54-206ENST00000549271 TLDC2A0PJX2 215 aa11.06□□□□□ -0.64
DDX54-206ENST00000549271 C1orf226A1L170 272 aa11.06□□□□□ -0.64
DDX54-206ENST00000549271 COPEO14579 308 aa11.06□□□□□ -0.64
DDX54-206ENST00000549271 ERN1O75460 977 aaKnown RBP11.06□□□□□ -0.64
DDX54-206ENST00000549271 LRATO95237 230 aa11.06□□□□□ -0.64
DDX54-206ENST00000549271 SLU7O95391 586 aaKnown RBP11.06□□□□□ -0.64
DDX54-206ENST00000549271 ABCB1P08183 1280 aaPredicted RBP11.06□□□□□ -0.64
DDX54-206ENST00000549271 CPMP14384 443 aa11.06□□□□□ -0.64
DDX54-206ENST00000549271 CPA3P15088 417 aa11.06□□□□□ -0.64
DDX54-206ENST00000549271 PORP16435 677 aaPredicted RBP11.06□□□□□ -0.64
DDX54-206ENST00000549271 ABCD3P28288 659 aa11.06□□□□□ -0.64
DDX54-206ENST00000549271 PTPN6P29350 595 aa11.06□□□□□ -0.64
DDX54-206ENST00000549271 TRA2BP62995 288 aaKnown RBP11.06□□□□□ -0.64
DDX54-206ENST00000549271 HMGCS1Q01581 520 aa11.06□□□□□ -0.64
DDX54-206ENST00000549271 DUSP2Q05923 314 aa11.06□□□□□ -0.64
DDX54-206ENST00000549271 BICRALQ6AI39 1079 aa11.06□□□□□ -0.64
DDX54-206ENST00000549271 TIGD3Q6B0B8 471 aa11.06□□□□□ -0.64
DDX54-206ENST00000549271 WDR93Q6P2C0 686 aa11.06□□□□□ -0.64
DDX54-206ENST00000549271 TMEM64Q6YI46 380 aa11.06□□□□□ -0.64
DDX54-206ENST00000549271 GBP7Q8N8V2 638 aaPredicted RBP11.06□□□□□ -0.64
DDX54-206ENST00000549271 MAPK1IP1LQ8NDC0 245 aa11.06□□□□□ -0.64
DDX54-206ENST00000549271 RDH11Q8TC12 318 aa11.06□□□□□ -0.64
DDX54-206ENST00000549271 ZPLD1Q8TCW7 415 aa11.06□□□□□ -0.64
DDX54-206ENST00000549271 APIPQ96GX9 242 aa11.06□□□□□ -0.64
DDX54-206ENST00000549271 WDYHV1Q96HA8 205 aa11.06□□□□□ -0.64
DDX54-206ENST00000549271 ZNF681Q96N22 645 aa11.06□□□□□ -0.64
DDX54-206ENST00000549271 GNRHR2Q96P88 292 aa11.06□□□□□ -0.64
DDX54-206ENST00000549271 TRIB1Q96RU8 372 aa11.06□□□□□ -0.64
DDX54-206ENST00000549271 UGT2B28Q9BY64 529 aa11.06□□□□□ -0.64
DDX54-206ENST00000549271 ZNF701Q9NV72 531 aaPredicted RBP11.06□□□□□ -0.64
DDX54-206ENST00000549271 HEY2Q9UBP5 337 aa11.06□□□□□ -0.64
DDX54-206ENST00000549271 NDRG3Q9UGV2 375 aa11.06□□□□□ -0.64
DDX54-206ENST00000549271 MCM8Q9UJA3 840 aa11.06□□□□□ -0.64
DDX54-206ENST00000549271 CFL2Q9Y281 166 aa11.06□□□□□ -0.64
DDX54-206ENST00000549271 STK38LQ9Y2H1 464 aa11.06□□□□□ -0.64
DDX54-206ENST00000549271 CD5LO43866 347 aa11.05□□□□□ -0.64
DDX54-206ENST00000549271 GUCY1B2O75343 617 aa11.05□□□□□ -0.64
DDX54-206ENST00000549271 TRAPPC6AO75865 159 aa11.05□□□□□ -0.64
DDX54-206ENST00000549271 ACTL6AO96019 429 aa11.05□□□□□ -0.64
DDX54-206ENST00000549271 TMIGD3P0DMS9 266 aaPredicted RBP11.05□□□□□ -0.64
DDX54-206ENST00000549271 CPN1P15169 458 aa11.05□□□□□ -0.64
DDX54-206ENST00000549271 GPX3P22352 226 aa11.05□□□□□ -0.64
DDX54-206ENST00000549271 FEN1P39748 380 aaKnown RBP11.05□□□□□ -0.64
DDX54-206ENST00000549271 MC3RP41968 323 aa11.05□□□□□ -0.64
DDX54-206ENST00000549271 MASP1P48740 699 aa11.05□□□□□ -0.64
DDX54-206ENST00000549271 NAA20P61599 178 aa11.05□□□□□ -0.64
DDX54-206ENST00000549271 MAP4K2Q12851 820 aa11.05□□□□□ -0.64
DDX54-206ENST00000549271 FOXF2Q12947 444 aa11.05□□□□□ -0.64
DDX54-206ENST00000549271 SNTA1Q13424 505 aa11.05□□□□□ -0.64
DDX54-206ENST00000549271 CHRFAM7AQ494W8 412 aa11.05□□□□□ -0.64
DDX54-206ENST00000549271 SLC30A6Q6NXT4 461 aa11.05□□□□□ -0.64
DDX54-206ENST00000549271 FAM180BQ6P0A1 224 aa11.05□□□□□ -0.64
DDX54-206ENST00000549271 GALNT18Q6P9A2 607 aa11.05□□□□□ -0.64
DDX54-206ENST00000549271 FAM111BQ6SJ93 734 aa11.05□□□□□ -0.64
DDX54-206ENST00000549271 FRMD7Q6ZUT3 714 aa11.05□□□□□ -0.64
DDX54-206ENST00000549271 NUP54Q7Z3B4 507 aa11.05□□□□□ -0.64
DDX54-206ENST00000549271 LUZP2Q86TE4 346 aa11.05□□□□□ -0.64
DDX54-206ENST00000549271 TRABD2AQ86V40 505 aa11.05□□□□□ -0.64
DDX54-206ENST00000549271 C10orf107Q8IVU9 208 aa11.05□□□□□ -0.64
DDX54-206ENST00000549271 BANPQ8N9N5 519 aa11.05□□□□□ -0.64
DDX54-206ENST00000549271 C9orf106Q8NAJ2 232 aa11.05□□□□□ -0.64
DDX54-206ENST00000549271 CAVIN3Q969G5 261 aa11.05□□□□□ -0.64
DDX54-206ENST00000549271 ABTB1Q969K4 478 aaPredicted RBP11.05□□□□□ -0.64
DDX54-206ENST00000549271 PIK3IP1Q96FE7 263 aa11.05□□□□□ -0.64
DDX54-206ENST00000549271 MARK4Q96L34 752 aa11.05□□□□□ -0.64
DDX54-206ENST00000549271 UCN2Q96RP3 112 aa11.05□□□□□ -0.64
DDX54-206ENST00000549271 SFXN3Q9BWM7 321 aa11.05□□□□□ -0.64
DDX54-206ENST00000549271 SIRT5Q9NXA8 310 aa11.05□□□□□ -0.64
DDX54-206ENST00000549271 MKS1Q9NXB0 559 aa11.05□□□□□ -0.64
DDX54-206ENST00000549271 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.05□□□□□ -0.64
DDX54-206ENST00000549271 LGALS13Q9UHV8 139 aa11.05□□□□□ -0.64
DDX54-206ENST00000549271 ZNF639Q9UID6 485 aa11.05□□□□□ -0.64
DDX54-206ENST00000549271 PLLPQ9Y342 182 aa11.05□□□□□ -0.64
DDX54-206ENST00000549271 V9GYY5 206 aaPredicted RBP11.05□□□□□ -0.64
DDX54-206ENST00000549271 RNF223E7ERA6 249 aa11.04□□□□□ -0.64
DDX54-206ENST00000549271 ACOX3O15254 700 aa11.04□□□□□ -0.64
DDX54-206ENST00000549271 PCDH7O60245 1069 aa11.04□□□□□ -0.64
DDX54-206ENST00000549271 ERAL1O75616 437 aaKnown RBP11.04□□□□□ -0.64
DDX54-206ENST00000549271 PPM1BO75688 479 aa11.04□□□□□ -0.64
DDX54-206ENST00000549271 ATP1B1P05026 303 aa11.04□□□□□ -0.64
DDX54-206ENST00000549271 IL3P08700 152 aa11.04□□□□□ -0.64
DDX54-206ENST00000549271 FAM157CP0CG43 387 aa11.04□□□□□ -0.64
DDX54-206ENST00000549271 NT5EP21589 574 aa11.04□□□□□ -0.64
DDX54-206ENST00000549271 CRYGSP22914 178 aa11.04□□□□□ -0.64
DDX54-206ENST00000549271 LOXP28300 417 aaPredicted RBP11.04□□□□□ -0.64
DDX54-206ENST00000549271 DEKP35659 375 aaKnown RBP11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms