RNA–Protein interactions for RNA: ENST00000547018.5

SCAF11-209, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 5

Gene SCAF11, Length 3,271 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-209ENST00000547018 SLC38A1Q9H2H9 487 aa11.91□□□□□ -0.5
SCAF11-209ENST00000547018 TTYH1Q9H313 450 aaPredicted RBP11.91□□□□□ -0.5
SCAF11-209ENST00000547018 KLHL28Q9NXS3 571 aa11.91□□□□□ -0.5
SCAF11-209ENST00000547018 DAPP1Q9UN19 280 aa11.91□□□□□ -0.5
SCAF11-209ENST00000547018 TRIM64A6NGJ6 449 aa11.91□□□□□ -0.5
SCAF11-209ENST00000547018 C2orf74A8MZ97 194 aa11.91□□□□□ -0.5
SCAF11-209ENST00000547018 PRKYO43930 277 aa11.91□□□□□ -0.5
SCAF11-209ENST00000547018 EPPINO95925 133 aa11.91□□□□□ -0.5
SCAF11-209ENST00000547018 HNRNPCP07910 306 aaKnown RBP eCLIP11.91□□□□□ -0.5
SCAF11-209ENST00000547018 ITIH1P19827 911 aa11.91□□□□□ -0.5
SCAF11-209ENST00000547018 GFERP55789 205 aa11.91□□□□□ -0.5
SCAF11-209ENST00000547018 RPL6Q02878 288 aaKnown RBP11.91□□□□□ -0.5
SCAF11-209ENST00000547018 STX4Q12846 297 aa11.91□□□□□ -0.5
SCAF11-209ENST00000547018 FZD2Q14332 565 aa11.91□□□□□ -0.5
SCAF11-209ENST00000547018 TBC1D25Q3MII6 688 aa11.91□□□□□ -0.5
SCAF11-209ENST00000547018 SHISA6Q6ZSJ9 500 aa11.91□□□□□ -0.5
SCAF11-209ENST00000547018 PRSS48Q7RTY5 328 aa11.91□□□□□ -0.5
SCAF11-209ENST00000547018 MCFD2Q8NI22 146 aa11.91□□□□□ -0.5
SCAF11-209ENST00000547018 TMEM255BQ8WV15 326 aa11.91□□□□□ -0.5
SCAF11-209ENST00000547018 GAL3ST3Q96A11 431 aa11.91□□□□□ -0.5
SCAF11-209ENST00000547018 GSDMCQ9BYG8 508 aa11.91□□□□□ -0.5
SCAF11-209ENST00000547018 THSD1Q9NS62 852 aa11.91□□□□□ -0.5
SCAF11-209ENST00000547018 NLGN3Q9NZ94 848 aa11.91□□□□□ -0.5
SCAF11-209ENST00000547018 PSORS1C1Q9UIG5 152 aa11.91□□□□□ -0.5
SCAF11-209ENST00000547018 A0A087WUU8 490 aa11.9□□□□□ -0.5
SCAF11-209ENST00000547018 PRAMEF26H0Y7S4 382 aa11.9□□□□□ -0.5
SCAF11-209ENST00000547018 APBB3O95704 486 aa11.9□□□□□ -0.5
SCAF11-209ENST00000547018 CT62P0C5K7 136 aa11.9□□□□□ -0.5
SCAF11-209ENST00000547018 GNSP15586 552 aa11.9□□□□□ -0.5
SCAF11-209ENST00000547018 SSTR4P31391 388 aa11.9□□□□□ -0.5
SCAF11-209ENST00000547018 GABARAPL2P60520 117 aa11.9□□□□□ -0.5
SCAF11-209ENST00000547018 BTG2P78543 158 aa11.9□□□□□ -0.5
SCAF11-209ENST00000547018 CCINQ13939 588 aa11.9□□□□□ -0.5
SCAF11-209ENST00000547018 INAQ16352 499 aa11.9□□□□□ -0.5
SCAF11-209ENST00000547018 MAPK14Q16539 360 aa11.9□□□□□ -0.5
SCAF11-209ENST00000547018 NDUFAF6Q330K2 333 aa11.9□□□□□ -0.5
SCAF11-209ENST00000547018 DGAT2L6Q6ZPD8 337 aa11.9□□□□□ -0.5
SCAF11-209ENST00000547018 USP30Q70CQ3 517 aa11.9□□□□□ -0.5
SCAF11-209ENST00000547018 Q7L0L9 218 aa11.9□□□□□ -0.5
SCAF11-209ENST00000547018 ZAR1Q86SH2 424 aa11.9□□□□□ -0.5
SCAF11-209ENST00000547018 C7orf57Q8NEG2 295 aa11.9□□□□□ -0.5
SCAF11-209ENST00000547018 OR56A1Q8NGH5 318 aa11.9□□□□□ -0.5
SCAF11-209ENST00000547018 SLC38A4Q969I6 547 aa11.9□□□□□ -0.5
SCAF11-209ENST00000547018 CSNK1G3Q9Y6M4 447 aa11.9□□□□□ -0.5
SCAF11-209ENST00000547018 CNOT1A5YKK6 2376 aaKnown RBP11.9□□□□□ -0.5
SCAF11-209ENST00000547018 ATG2AQ2TAZ0 1938 aa11.9□□□□□ -0.5
SCAF11-209ENST00000547018 SLC2A10O95528 541 aa11.9□□□□□ -0.5
SCAF11-209ENST00000547018 ADORA3P0DMS8 318 aa11.9□□□□□ -0.5
SCAF11-209ENST00000547018 PORP16435 677 aaPredicted RBP11.9□□□□□ -0.5
SCAF11-209ENST00000547018 RXRGP48443 463 aa11.9□□□□□ -0.5
SCAF11-209ENST00000547018 EMP3P54852 163 aa11.9□□□□□ -0.5
SCAF11-209ENST00000547018 ZNF267Q14586 743 aaPredicted RBP11.9□□□□□ -0.5
SCAF11-209ENST00000547018 KLHL12Q53G59 568 aa11.9□□□□□ -0.5
SCAF11-209ENST00000547018 OR2G6Q5TZ20 316 aa11.9□□□□□ -0.5
SCAF11-209ENST00000547018 LIPKQ5VXJ0 399 aa11.9□□□□□ -0.5
SCAF11-209ENST00000547018 FAAH2Q6GMR7 532 aa11.9□□□□□ -0.5
SCAF11-209ENST00000547018 OR51A7Q8NH64 312 aa11.9□□□□□ -0.5
SCAF11-209ENST00000547018 MMABQ96EY8 250 aaPredicted RBP11.9□□□□□ -0.5
SCAF11-209ENST00000547018 TUBA1CQ9BQE3 449 aa11.9□□□□□ -0.5
SCAF11-209ENST00000547018 ITPAQ9BY32 194 aa11.9□□□□□ -0.5
SCAF11-209ENST00000547018 USP36Q9P275 1121 aaKnown RBP11.9□□□□□ -0.5
SCAF11-209ENST00000547018 SPACA6W5XKT8 324 aa11.9□□□□□ -0.5
SCAF11-209ENST00000547018 ZC3H12DA2A288 527 aaKnown RBP11.89□□□□□ -0.51
SCAF11-209ENST00000547018 ZIC2O95409 532 aaPredicted RBP11.89□□□□□ -0.51
SCAF11-209ENST00000547018 OSMP13725 252 aa11.89□□□□□ -0.51
SCAF11-209ENST00000547018 IDUAP35475 653 aa11.89□□□□□ -0.51
SCAF11-209ENST00000547018 GSTM5P46439 218 aa11.89□□□□□ -0.51
SCAF11-209ENST00000547018 RPS7P62081 194 aaKnown RBP11.89□□□□□ -0.51
SCAF11-209ENST00000547018 GXYLT1Q4G148 440 aa11.89□□□□□ -0.51
SCAF11-209ENST00000547018 ENTPD8Q5MY95 495 aa11.89□□□□□ -0.51
SCAF11-209ENST00000547018 COL13A1Q5TAT6 717 aaPredicted RBP11.89□□□□□ -0.51
SCAF11-209ENST00000547018 TMEM64Q6YI46 380 aa11.89□□□□□ -0.51
SCAF11-209ENST00000547018 ABHD13Q7L211 337 aa11.89□□□□□ -0.51
SCAF11-209ENST00000547018 RBM18Q96H35 190 aaKnown RBP11.89□□□□□ -0.51
SCAF11-209ENST00000547018 HSPA12BQ96MM6 686 aa11.89□□□□□ -0.51
SCAF11-209ENST00000547018 PTCHD1Q96NR3 888 aa11.89□□□□□ -0.51
SCAF11-209ENST00000547018 MGLLQ99685 303 aa11.89□□□□□ -0.51
SCAF11-209ENST00000547018 TSSK6Q9BXA6 273 aa11.89□□□□□ -0.51
SCAF11-209ENST00000547018 MED20Q9H944 212 aa11.89□□□□□ -0.51
SCAF11-209ENST00000547018 ADAM29Q9UKF5 820 aa11.89□□□□□ -0.51
SCAF11-209ENST00000547018 CES1P1Q9UKY3 287 aa11.89□□□□□ -0.51
SCAF11-209ENST00000547018 SLC7A7Q9UM01 511 aa11.89□□□□□ -0.51
SCAF11-209ENST00000547018 CLCA3PQ9Y6N3 262 aa11.89□□□□□ -0.51
SCAF11-209ENST00000547018 GVINP1Q7Z2Y8 2422 aa11.89□□□□□ -0.51
SCAF11-209ENST00000547018 SH3PXD2BA1X283 911 aa11.89□□□□□ -0.51
SCAF11-209ENST00000547018 M0R082 166 aa11.89□□□□□ -0.51
SCAF11-209ENST00000547018 MAOAP21397 527 aa11.89□□□□□ -0.51
SCAF11-209ENST00000547018 SERPINB1P30740 379 aa11.89□□□□□ -0.51
SCAF11-209ENST00000547018 KIAA1024LP59773 190 aa11.89□□□□□ -0.51
SCAF11-209ENST00000547018 TNFRSF17Q02223 184 aa11.89□□□□□ -0.51
SCAF11-209ENST00000547018 CSTF1Q05048 431 aaKnown RBP11.89□□□□□ -0.51
SCAF11-209ENST00000547018 DOC2BQ14184 412 aa11.89□□□□□ -0.51
SCAF11-209ENST00000547018 KIR2DS3Q14952 304 aa11.89□□□□□ -0.51
SCAF11-209ENST00000547018 MRM1Q6IN84 353 aaKnown RBP11.89□□□□□ -0.51
SCAF11-209ENST00000547018 TSSK4Q6SA08 328 aa11.89□□□□□ -0.51
SCAF11-209ENST00000547018 ABHD8Q96I13 439 aa11.89□□□□□ -0.51
SCAF11-209ENST00000547018 NECTIN4Q96NY8 510 aa11.89□□□□□ -0.51
SCAF11-209ENST00000547018 ACTRT3Q9BYD9 372 aa11.89□□□□□ -0.51
SCAF11-209ENST00000547018 CCNB1IP1Q9NPC3 277 aa11.89□□□□□ -0.51
SCAF11-209ENST00000547018 ATP13A2Q9NQ11 1180 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms