RNA–Protein interactions for RNA: ENST00000545934.5

CPSF7-225, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 565 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-225ENST00000545934 IFT88Q13099 833 aa15.03■□□□□ -0
CPSF7-225ENST00000545934 EFR3AQ14156 821 aa15.03■□□□□ -0
CPSF7-225ENST00000545934 CAPRIN1Q14444 709 aaKnown RBP15.03■□□□□ -0
CPSF7-225ENST00000545934 FAM180BQ6P0A1 224 aa15.03■□□□□ -0
CPSF7-225ENST00000545934 ZDHHC24Q6UX98 284 aa15.03■□□□□ -0
CPSF7-225ENST00000545934 NPSR1Q6W5P4 371 aa15.03■□□□□ -0
CPSF7-225ENST00000545934 ZNF550Q7Z398 422 aa15.03■□□□□ -0
CPSF7-225ENST00000545934 CTAGE4Q8IX94 777 aa15.03■□□□□ -0
CPSF7-225ENST00000545934 PLD6Q8N2A8 252 aaKnown RBP15.03■□□□□ -0
CPSF7-225ENST00000545934 OR4F6Q8NGB9 312 aa15.03■□□□□ -0
CPSF7-225ENST00000545934 CAVIN3Q969G5 261 aa15.03■□□□□ -0
CPSF7-225ENST00000545934 ATP6V1E2Q96A05 226 aa15.03■□□□□ -0
CPSF7-225ENST00000545934 ERP27Q96DN0 273 aa15.03■□□□□ -0
CPSF7-225ENST00000545934 NSUN5Q96P11 429 aaKnown RBP15.03■□□□□ -0
CPSF7-225ENST00000545934 FAM111AQ96PZ2 611 aa15.03■□□□□ -0
CPSF7-225ENST00000545934 ANKRA2Q9H9E1 313 aa15.03■□□□□ -0
CPSF7-225ENST00000545934 FARSBQ9NSD9 589 aaKnown RBP15.03■□□□□ -0
CPSF7-225ENST00000545934 ZNF701Q9NV72 531 aaPredicted RBP15.03■□□□□ -0
CPSF7-225ENST00000545934 PSME2Q9UL46 239 aa15.03■□□□□ -0
CPSF7-225ENST00000545934 C16orf97H3BN30 126 aa15.02■□□□□ -0
CPSF7-225ENST00000545934 TNFRSF21O75509 655 aa15.02■□□□□ -0
CPSF7-225ENST00000545934 SUCLG1P53597 346 aaKnown RBP15.02■□□□□ -0
CPSF7-225ENST00000545934 GNG11P61952 73 aa15.02■□□□□ -0
CPSF7-225ENST00000545934 PPP2R2BQ00005 443 aa15.02■□□□□ -0
CPSF7-225ENST00000545934 KRTAP1-1Q07627 177 aa15.02■□□□□ -0
CPSF7-225ENST00000545934 TTC19Q6DKK2 380 aaPredicted RBP15.02■□□□□ -0
CPSF7-225ENST00000545934 KLC3Q6P597 504 aa15.02■□□□□ -0
CPSF7-225ENST00000545934 FBXO25Q8TCJ0 367 aa15.02■□□□□ -0
CPSF7-225ENST00000545934 ZNF845Q96IR2 970 aaPredicted RBP15.02■□□□□ -0
CPSF7-225ENST00000545934 SLC39A3Q9BRY0 314 aa15.02■□□□□ -0
CPSF7-225ENST00000545934 ELOVL6Q9H5J4 265 aa15.02■□□□□ -0
CPSF7-225ENST00000545934 BRF2Q9HAW0 419 aa15.02■□□□□ -0
CPSF7-225ENST00000545934 TMCO1Q9UM00 188 aa15.02■□□□□ -0
CPSF7-225ENST00000545934 SLC12A4Q9UP95 1085 aa15.02■□□□□ -0
CPSF7-225ENST00000545934 COL6A5A8TX70 2615 aa15.02□□□□□ -0.01
CPSF7-225ENST00000545934 NME6O75414 186 aaPredicted RBP15.01□□□□□ -0.01
CPSF7-225ENST00000545934 PDYNP01213 254 aa15.01□□□□□ -0.01
CPSF7-225ENST00000545934 THBDP07204 575 aa15.01□□□□□ -0.01
CPSF7-225ENST00000545934 RPS17P08708 135 aaKnown RBP15.01□□□□□ -0.01
CPSF7-225ENST00000545934 ARL1P40616 181 aaPredicted RBP15.01□□□□□ -0.01
CPSF7-225ENST00000545934 MAGEA12P43365 314 aa15.01□□□□□ -0.01
CPSF7-225ENST00000545934 PLTPP55058 493 aa15.01□□□□□ -0.01
CPSF7-225ENST00000545934 SIRPAP78324 504 aa15.01□□□□□ -0.01
CPSF7-225ENST00000545934 OCRLQ01968 901 aa15.01□□□□□ -0.01
CPSF7-225ENST00000545934 CAV1Q03135 178 aa15.01□□□□□ -0.01
CPSF7-225ENST00000545934 FGFBP1Q14512 234 aa15.01□□□□□ -0.01
CPSF7-225ENST00000545934 LARP4Q71RC2 724 aaKnown RBP eCLIP15.01□□□□□ -0.01
CPSF7-225ENST00000545934 UBQLNLQ8IYU4 475 aa15.01□□□□□ -0.01
CPSF7-225ENST00000545934 MEIOBQ8N635 442 aa15.01□□□□□ -0.01
CPSF7-225ENST00000545934 ZNF610Q8N9Z0 462 aa15.01□□□□□ -0.01
CPSF7-225ENST00000545934 LRRN4CLQ8ND94 238 aa15.01□□□□□ -0.01
CPSF7-225ENST00000545934 OR2M3Q8NG83 312 aa15.01□□□□□ -0.01
CPSF7-225ENST00000545934 PHF21BQ96EK2 531 aa15.01□□□□□ -0.01
CPSF7-225ENST00000545934 UTS2RQ9UKP6 389 aa15.01□□□□□ -0.01
CPSF7-225ENST00000545934 ZNF175Q9Y473 711 aa15.01□□□□□ -0.01
CPSF7-225ENST00000545934 ZNF780BQ9Y6R6 833 aa15.01□□□□□ -0.01
CPSF7-225ENST00000545934 PRR14LQ5THK1 2151 aa15.01□□□□□ -0.01
CPSF7-225ENST00000545934 H0YC42 278 aa15□□□□□ -0.01
CPSF7-225ENST00000545934 KLF4O43474 513 aa15□□□□□ -0.01
CPSF7-225ENST00000545934 TMCC2O75069 709 aa15□□□□□ -0.01
CPSF7-225ENST00000545934 SOX30O94993 753 aa15□□□□□ -0.01
CPSF7-225ENST00000545934 TCEA1P23193 301 aaKnown RBP15□□□□□ -0.01
CPSF7-225ENST00000545934 TYK2P29597 1187 aa15□□□□□ -0.01
CPSF7-225ENST00000545934 SERPINB8P50452 374 aa15□□□□□ -0.01
CPSF7-225ENST00000545934 TPD52P55327 224 aaPredicted RBP15□□□□□ -0.01
CPSF7-225ENST00000545934 EEFSECP57772 596 aaKnown RBP15□□□□□ -0.01
CPSF7-225ENST00000545934 TRADDQ15628 312 aa15□□□□□ -0.01
CPSF7-225ENST00000545934 SGO1Q5FBB7 561 aa15□□□□□ -0.01
CPSF7-225ENST00000545934 FAM219BQ5XKK7 198 aa15□□□□□ -0.01
CPSF7-225ENST00000545934 LETMD1Q6P1Q0 360 aa15□□□□□ -0.01
CPSF7-225ENST00000545934 PLEKHM3Q6ZWE6 761 aa15□□□□□ -0.01
CPSF7-225ENST00000545934 CHMP1BQ7LBR1 199 aa15□□□□□ -0.01
CPSF7-225ENST00000545934 MILR1Q7Z6M3 343 aa15□□□□□ -0.01
CPSF7-225ENST00000545934 CCDC25Q86WR0 208 aa15□□□□□ -0.01
CPSF7-225ENST00000545934 CCDC116Q8IYX3 515 aa15□□□□□ -0.01
CPSF7-225ENST00000545934 C1orf52Q8N6N3 182 aaKnown RBP15□□□□□ -0.01
CPSF7-225ENST00000545934 SPATA4Q8NEY3 305 aa15□□□□□ -0.01
CPSF7-225ENST00000545934 OR4N2Q8NGD1 307 aa15□□□□□ -0.01
CPSF7-225ENST00000545934 FNDC9Q8TBE3 224 aa15□□□□□ -0.01
CPSF7-225ENST00000545934 ZC3HAV1LQ96H79 300 aaKnown RBP15□□□□□ -0.01
CPSF7-225ENST00000545934 FAIM2Q9BWQ8 316 aa15□□□□□ -0.01
CPSF7-225ENST00000545934 FOLH1BQ9HBA9 442 aa15□□□□□ -0.01
CPSF7-225ENST00000545934 ZNF225Q9UK10 706 aa15□□□□□ -0.01
CPSF7-225ENST00000545934 ZNF337Q9Y3M9 751 aa15□□□□□ -0.01
CPSF7-225ENST00000545934 ROS1P08922 2347 aa15□□□□□ -0.01
CPSF7-225ENST00000545934 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP14.99□□□□□ -0.01
CPSF7-225ENST00000545934 LINC01387J3KSC0 135 aa14.99□□□□□ -0.01
CPSF7-225ENST00000545934 PPP6CO00743 305 aa14.99□□□□□ -0.01
CPSF7-225ENST00000545934 FADS1O60427 444 aa14.99□□□□□ -0.01
CPSF7-225ENST00000545934 PLOD3O60568 738 aa14.99□□□□□ -0.01
CPSF7-225ENST00000545934 CRLF1O75462 422 aa14.99□□□□□ -0.01
CPSF7-225ENST00000545934 TBXA2RP21731 343 aa14.99□□□□□ -0.01
CPSF7-225ENST00000545934 IL12BP29460 328 aa14.99□□□□□ -0.01
CPSF7-225ENST00000545934 EVI2BP34910 448 aa14.99□□□□□ -0.01
CPSF7-225ENST00000545934 ALDH9A1P49189 494 aa14.99□□□□□ -0.01
CPSF7-225ENST00000545934 GANABQ14697 944 aaKnown RBP14.99□□□□□ -0.01
CPSF7-225ENST00000545934 SH2D5Q6ZV89 423 aa14.99□□□□□ -0.01
CPSF7-225ENST00000545934 OR4K17Q8NGC6 315 aa14.99□□□□□ -0.01
CPSF7-225ENST00000545934 OR9A2Q8NGT5 310 aa14.99□□□□□ -0.01
CPSF7-225ENST00000545934 ZNF483Q8TF39 744 aaPredicted RBP14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms