RNA–Protein interactions for RNA: ENST00000545856.5

PRPF40A-212, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 1 (best)

Gene PRPF40A, Length 1,358 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-212ENST00000545856 SNX13Q9Y5W8 968 aa14.84□□□□□ -0.03
PRPF40A-212ENST00000545856 CHD8Q9HCK8 2581 aa14.83□□□□□ -0.03
PRPF40A-212ENST00000545856 A0A0G2JPF8 293 aa14.83□□□□□ -0.04
PRPF40A-212ENST00000545856 A8MVJ9 347 aa14.83□□□□□ -0.04
PRPF40A-212ENST00000545856 HNRNPCL2B2RXH8 293 aa14.83□□□□□ -0.04
PRPF40A-212ENST00000545856 HNRNPCL3B7ZW38 293 aa14.83□□□□□ -0.04
PRPF40A-212ENST00000545856 TLX3O43711 291 aaPredicted RBP14.83□□□□□ -0.04
PRPF40A-212ENST00000545856 STX11O75558 287 aa14.83□□□□□ -0.04
PRPF40A-212ENST00000545856 HNRNPCL4P0DMR1 293 aa14.83□□□□□ -0.04
PRPF40A-212ENST00000545856 OR12D1P0DN82 309 aa14.83□□□□□ -0.04
PRPF40A-212ENST00000545856 NQO1P15559 274 aaKnown RBP14.83□□□□□ -0.04
PRPF40A-212ENST00000545856 GGT1P19440 569 aa14.83□□□□□ -0.04
PRPF40A-212ENST00000545856 SPINK2P20155 84 aa14.83□□□□□ -0.04
PRPF40A-212ENST00000545856 ENDOUP21128 410 aaKnown RBP14.83□□□□□ -0.04
PRPF40A-212ENST00000545856 PTGER1P34995 402 aa14.83□□□□□ -0.04
PRPF40A-212ENST00000545856 FOXL2P58012 376 aa14.83□□□□□ -0.04
PRPF40A-212ENST00000545856 CDC20Q12834 499 aa14.83□□□□□ -0.04
PRPF40A-212ENST00000545856 ATP1A4Q13733 1029 aa14.83□□□□□ -0.04
PRPF40A-212ENST00000545856 SCARB2Q14108 478 aa14.83□□□□□ -0.04
PRPF40A-212ENST00000545856 BROXQ5VW32 411 aa14.83□□□□□ -0.04
PRPF40A-212ENST00000545856 LCN8Q6JVE9 175 aa14.83□□□□□ -0.04
PRPF40A-212ENST00000545856 GPALPP1Q8IXQ4 340 aa14.83□□□□□ -0.04
PRPF40A-212ENST00000545856 SLC34A3Q8N130 599 aa14.83□□□□□ -0.04
PRPF40A-212ENST00000545856 CLEC4FQ8N1N0 589 aa14.83□□□□□ -0.04
PRPF40A-212ENST00000545856 FAM110BQ8TC76 370 aa14.83□□□□□ -0.04
PRPF40A-212ENST00000545856 XAGE5Q8WWM1 108 aa14.83□□□□□ -0.04
PRPF40A-212ENST00000545856 ZNF607Q96SK3 696 aa14.83□□□□□ -0.04
PRPF40A-212ENST00000545856 ZNF350Q9GZX5 532 aa14.83□□□□□ -0.04
PRPF40A-212ENST00000545856 HOXD1Q9GZZ0 328 aa14.83□□□□□ -0.04
PRPF40A-212ENST00000545856 SAP130Q9H0E3 1048 aa14.83□□□□□ -0.04
PRPF40A-212ENST00000545856 CACYBPQ9HB71 228 aaKnown RBP14.83□□□□□ -0.04
PRPF40A-212ENST00000545856 MYOTQ9UBF9 498 aa14.83□□□□□ -0.04
PRPF40A-212ENST00000545856 SLC7A8Q9UHI5 535 aa14.83□□□□□ -0.04
PRPF40A-212ENST00000545856 PRDM4Q9UKN5 801 aa14.83□□□□□ -0.04
PRPF40A-212ENST00000545856 PCDHGA10Q9Y5H3 936 aa14.83□□□□□ -0.04
PRPF40A-212ENST00000545856 URB1O60287 2271 aaKnown RBP14.82□□□□□ -0.04
PRPF40A-212ENST00000545856 DSPPQ9NZW4 1301 aa14.82□□□□□ -0.04
PRPF40A-212ENST00000545856 GSTA4O15217 222 aa14.82□□□□□ -0.04
PRPF40A-212ENST00000545856 KLK10O43240 276 aa14.82□□□□□ -0.04
PRPF40A-212ENST00000545856 SERPINB7O75635 380 aa14.82□□□□□ -0.04
PRPF40A-212ENST00000545856 CAPNS1P04632 268 aa14.82□□□□□ -0.04
PRPF40A-212ENST00000545856 NGFRP08138 427 aa14.82□□□□□ -0.04
PRPF40A-212ENST00000545856 NR2F1P10589 423 aa14.82□□□□□ -0.04
PRPF40A-212ENST00000545856 GABRA3P34903 492 aa14.82□□□□□ -0.04
PRPF40A-212ENST00000545856 KRT20P35900 424 aa14.82□□□□□ -0.04
PRPF40A-212ENST00000545856 EIF2S3P41091 472 aaKnown RBP14.82□□□□□ -0.04
PRPF40A-212ENST00000545856 PNLIPRP2P54317 469 aa14.82□□□□□ -0.04
PRPF40A-212ENST00000545856 PCBP3P57721 371 aaKnown RBP14.82□□□□□ -0.04
PRPF40A-212ENST00000545856 RPS26P62854 115 aaKnown RBP14.82□□□□□ -0.04
PRPF40A-212ENST00000545856 EFR3AQ14156 821 aa14.82□□□□□ -0.04
PRPF40A-212ENST00000545856 CRB2Q5IJ48 1285 aa14.82□□□□□ -0.04
PRPF40A-212ENST00000545856 DCST2Q5T1A1 773 aa14.82□□□□□ -0.04
PRPF40A-212ENST00000545856 VASH2Q86V25 355 aa14.82□□□□□ -0.04
PRPF40A-212ENST00000545856 APLFQ8IW19 511 aaPredicted RBP14.82□□□□□ -0.04
PRPF40A-212ENST00000545856 KIF2BQ8N4N8 673 aa14.82□□□□□ -0.04
PRPF40A-212ENST00000545856 OR5D16Q8NGK9 328 aa14.82□□□□□ -0.04
PRPF40A-212ENST00000545856 SLC38A5Q8WUX1 472 aa14.82□□□□□ -0.04
PRPF40A-212ENST00000545856 SLC35A4Q96G79 324 aa14.82□□□□□ -0.04
PRPF40A-212ENST00000545856 GAL3ST4Q96RP7 486 aa14.82□□□□□ -0.04
PRPF40A-212ENST00000545856 TMEM121BQ9BXQ6 578 aaPredicted RBP14.82□□□□□ -0.04
PRPF40A-212ENST00000545856 LHPPQ9H008 270 aa14.82□□□□□ -0.04
PRPF40A-212ENST00000545856 ANKRA2Q9H9E1 313 aa14.82□□□□□ -0.04
PRPF40A-212ENST00000545856 YARS2Q9Y2Z4 477 aaKnown RBP14.82□□□□□ -0.04
PRPF40A-212ENST00000545856 MRPS18BQ9Y676 258 aaKnown RBP14.82□□□□□ -0.04
PRPF40A-212ENST00000545856 CDC14CA4D256 554 aa14.81□□□□□ -0.04
PRPF40A-212ENST00000545856 OR6C70A6NIJ9 312 aa14.81□□□□□ -0.04
PRPF40A-212ENST00000545856 AQP12BA6NM10 295 aa14.81□□□□□ -0.04
PRPF40A-212ENST00000545856 CXCR6O00574 342 aa14.81□□□□□ -0.04
PRPF40A-212ENST00000545856 IL33O95760 270 aa14.81□□□□□ -0.04
PRPF40A-212ENST00000545856 ATP6V1C1P21283 382 aa14.81□□□□□ -0.04
PRPF40A-212ENST00000545856 POLE2P56282 527 aa14.81□□□□□ -0.04
PRPF40A-212ENST00000545856 FAM69BQ5VUD6 431 aa14.81□□□□□ -0.04
PRPF40A-212ENST00000545856 OPN5Q6U736 354 aa14.81□□□□□ -0.04
PRPF40A-212ENST00000545856 NPSR1Q6W5P4 371 aa14.81□□□□□ -0.04
PRPF40A-212ENST00000545856 LRRC69Q6ZNQ3 347 aa14.81□□□□□ -0.04
PRPF40A-212ENST00000545856 IFNEQ86WN2 208 aa14.81□□□□□ -0.04
PRPF40A-212ENST00000545856 DHFR2Q86XF0 187 aa14.81□□□□□ -0.04
PRPF40A-212ENST00000545856 HPS6Q86YV9 775 aa14.81□□□□□ -0.04
PRPF40A-212ENST00000545856 SLC44A2Q8IWA5 706 aaPredicted RBP14.81□□□□□ -0.04
PRPF40A-212ENST00000545856 AQP12AQ8IXF9 295 aa14.81□□□□□ -0.04
PRPF40A-212ENST00000545856 ZNF321PQ8N8H1 164 aa14.81□□□□□ -0.04
PRPF40A-212ENST00000545856 SIMC1Q8NDZ2 872 aa14.81□□□□□ -0.04
PRPF40A-212ENST00000545856 CDS1Q92903 461 aa14.81□□□□□ -0.04
PRPF40A-212ENST00000545856 TMEM19Q96HH6 336 aa14.81□□□□□ -0.04
PRPF40A-212ENST00000545856 ZNF354BQ96LW1 612 aa14.81□□□□□ -0.04
PRPF40A-212ENST00000545856 SECISBP2Q96T21 854 aaKnown RBP14.81□□□□□ -0.04
PRPF40A-212ENST00000545856 SDF2Q99470 211 aa14.81□□□□□ -0.04
PRPF40A-212ENST00000545856 TREX2Q9BQ50 279 aaPredicted RBP14.81□□□□□ -0.04
PRPF40A-212ENST00000545856 NXF5Q9H1B4 397 aaKnown RBP14.81□□□□□ -0.04
PRPF40A-212ENST00000545856 MTHFD2LQ9H903 347 aaPredicted RBP14.81□□□□□ -0.04
PRPF40A-212ENST00000545856 OLAHQ9NV23 265 aa14.81□□□□□ -0.04
PRPF40A-212ENST00000545856 ABI3Q9P2A4 366 aa14.81□□□□□ -0.04
PRPF40A-212ENST00000545856 POMPQ9Y244 141 aa14.81□□□□□ -0.04
PRPF40A-212ENST00000545856 DTX4Q9Y2E6 619 aa14.81□□□□□ -0.04
PRPF40A-212ENST00000545856 IFT52Q9Y366 437 aa14.81□□□□□ -0.04
PRPF40A-212ENST00000545856 SLC28A2O43868 658 aa14.8□□□□□ -0.04
PRPF40A-212ENST00000545856 HS6ST1O60243 411 aa14.8□□□□□ -0.04
PRPF40A-212ENST00000545856 KIAA0513O60268 411 aa14.8□□□□□ -0.04
PRPF40A-212ENST00000545856 KCNK2O95069 426 aa14.8□□□□□ -0.04
PRPF40A-212ENST00000545856 PGM3O95394 542 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms