RNA–Protein interactions for RNA: ENST00000545707.5

LDLR-204, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-204ENST00000545707 RRM2BQ7LG56 351 aa14.82□□□□□ -0.04
LDLR-204ENST00000545707 ASCC1Q8N9N2 400 aaKnown RBP14.82□□□□□ -0.04
LDLR-204ENST00000545707 SPPL3Q8TCT6 385 aa14.82□□□□□ -0.04
LDLR-204ENST00000545707 SUSD6Q92537 303 aa14.82□□□□□ -0.04
LDLR-204ENST00000545707 MS4A6EQ96DS6 147 aa14.82□□□□□ -0.04
LDLR-204ENST00000545707 SLX1AQ9BQ83 275 aa14.82□□□□□ -0.04
LDLR-204ENST00000545707 ARHGAP9Q9BRR9 750 aa14.82□□□□□ -0.04
LDLR-204ENST00000545707 SPATA5L1Q9BVQ7 753 aa14.82□□□□□ -0.04
LDLR-204ENST00000545707 PCBD2Q9H0N5 130 aa14.82□□□□□ -0.04
LDLR-204ENST00000545707 PRDM7Q9NQW5 492 aa14.82□□□□□ -0.04
LDLR-204ENST00000545707 ADAM29Q9UKF5 820 aa14.82□□□□□ -0.04
LDLR-204ENST00000545707 LTBP2Q14767 1821 aa14.82□□□□□ -0.04
LDLR-204ENST00000545707 TRPM6Q9BX84 2022 aa14.82□□□□□ -0.04
LDLR-204ENST00000545707 FAM172BPA6NC97 362 aa14.82□□□□□ -0.04
LDLR-204ENST00000545707 CD8B2A6NJW9 211 aa14.82□□□□□ -0.04
LDLR-204ENST00000545707 FAM183AA6NL82 134 aa14.82□□□□□ -0.04
LDLR-204ENST00000545707 CACNB4O00305 520 aaPredicted RBP14.82□□□□□ -0.04
LDLR-204ENST00000545707 STK25O00506 426 aa14.82□□□□□ -0.04
LDLR-204ENST00000545707 ZIC2O95409 532 aaPredicted RBP14.82□□□□□ -0.04
LDLR-204ENST00000545707 CD8BP10966 210 aa14.82□□□□□ -0.04
LDLR-204ENST00000545707 HIST1H1TP22492 207 aaPredicted RBP14.82□□□□□ -0.04
LDLR-204ENST00000545707 SLC1A3P43003 542 aa14.82□□□□□ -0.04
LDLR-204ENST00000545707 MINDY4Q4G0A6 757 aa14.82□□□□□ -0.04
LDLR-204ENST00000545707 VWA5B2Q8N398 1253 aa14.82□□□□□ -0.04
LDLR-204ENST00000545707 DTX3Q8N9I9 347 aa14.82□□□□□ -0.04
LDLR-204ENST00000545707 TMEM145Q8NBT3 493 aa14.82□□□□□ -0.04
LDLR-204ENST00000545707 LILRB4Q8NHJ6 448 aa14.82□□□□□ -0.04
LDLR-204ENST00000545707 GNPDA2Q8TDQ7 276 aa14.82□□□□□ -0.04
LDLR-204ENST00000545707 ZNF707Q96C28 371 aaPredicted RBP14.82□□□□□ -0.04
LDLR-204ENST00000545707 ART5Q96L15 291 aa14.82□□□□□ -0.04
LDLR-204ENST00000545707 NECTIN4Q96NY8 510 aa14.82□□□□□ -0.04
LDLR-204ENST00000545707 FCRL4Q96PJ5 515 aa14.82□□□□□ -0.04
LDLR-204ENST00000545707 FAIM2Q9BWQ8 316 aa14.82□□□□□ -0.04
LDLR-204ENST00000545707 PINK1Q9BXM7 581 aa14.82□□□□□ -0.04
LDLR-204ENST00000545707 PRSS16Q9NQE7 514 aa14.82□□□□□ -0.04
LDLR-204ENST00000545707 SERGEFQ9UGK8 458 aa14.82□□□□□ -0.04
LDLR-204ENST00000545707 CLCA3PQ9Y6N3 262 aa14.82□□□□□ -0.04
LDLR-204ENST00000545707 TTC36A6NLP5 189 aa14.81□□□□□ -0.04
LDLR-204ENST00000545707 GUCY1B2O75343 617 aa14.81□□□□□ -0.04
LDLR-204ENST00000545707 THY1P04216 161 aa14.81□□□□□ -0.04
LDLR-204ENST00000545707 GSTM3P21266 225 aa14.81□□□□□ -0.04
LDLR-204ENST00000545707 ATP5A1P25705 553 aaKnown RBP14.81□□□□□ -0.04
LDLR-204ENST00000545707 DMPKQ09013 629 aa14.81□□□□□ -0.04
LDLR-204ENST00000545707 KRT33BQ14525 404 aa14.81□□□□□ -0.04
LDLR-204ENST00000545707 CDK10Q15131 360 aa14.81□□□□□ -0.04
LDLR-204ENST00000545707 VASH1Q7L8A9 365 aaPredicted RBP14.81□□□□□ -0.04
LDLR-204ENST00000545707 RDH10Q8IZV5 341 aa14.81□□□□□ -0.04
LDLR-204ENST00000545707 GDPD1Q8N9F7 314 aa14.81□□□□□ -0.04
LDLR-204ENST00000545707 NUP43Q8NFH3 380 aa14.81□□□□□ -0.04
LDLR-204ENST00000545707 SENP5Q96HI0 755 aaPredicted RBP14.81□□□□□ -0.04
LDLR-204ENST00000545707 FRMD6Q96NE9 622 aa14.81□□□□□ -0.04
LDLR-204ENST00000545707 NDEL1Q9GZM8 345 aa14.81□□□□□ -0.04
LDLR-204ENST00000545707 NT5DC2Q9H857 520 aa14.81□□□□□ -0.04
LDLR-204ENST00000545707 RNF121Q9H920 327 aa14.81□□□□□ -0.04
LDLR-204ENST00000545707 SLC6A20Q9NP91 592 aa14.81□□□□□ -0.04
LDLR-204ENST00000545707 B3GAT2Q9NPZ5 323 aa14.81□□□□□ -0.04
LDLR-204ENST00000545707 SPHK1Q9NYA1 384 aa14.81□□□□□ -0.04
LDLR-204ENST00000545707 SLC13A4Q9UKG4 626 aa14.81□□□□□ -0.04
LDLR-204ENST00000545707 INSL6Q9Y581 213 aa14.81□□□□□ -0.04
LDLR-204ENST00000545707 A0A0G2JPF8 293 aa14.81□□□□□ -0.04
LDLR-204ENST00000545707 ZC3H12DA2A288 527 aaKnown RBP14.81□□□□□ -0.04
LDLR-204ENST00000545707 HNRNPCL2B2RXH8 293 aa14.81□□□□□ -0.04
LDLR-204ENST00000545707 HNRNPCL3B7ZW38 293 aa14.81□□□□□ -0.04
LDLR-204ENST00000545707 SOCS6O14544 535 aa14.81□□□□□ -0.04
LDLR-204ENST00000545707 MID1O15344 667 aa14.81□□□□□ -0.04
LDLR-204ENST00000545707 HNRNPCL4P0DMR1 293 aa14.81□□□□□ -0.04
LDLR-204ENST00000545707 GABRA5P31644 462 aa14.81□□□□□ -0.04
LDLR-204ENST00000545707 DRD3P35462 400 aa14.81□□□□□ -0.04
LDLR-204ENST00000545707 HSD17B2P37059 387 aa14.81□□□□□ -0.04
LDLR-204ENST00000545707 OMPP47874 163 aa14.81□□□□□ -0.04
LDLR-204ENST00000545707 SOX9P48436 509 aa14.81□□□□□ -0.04
LDLR-204ENST00000545707 PRMT2P55345 433 aa14.81□□□□□ -0.04
LDLR-204ENST00000545707 UBE3AQ05086 875 aa14.81□□□□□ -0.04
LDLR-204ENST00000545707 TSPAN31Q12999 210 aa14.81□□□□□ -0.04
LDLR-204ENST00000545707 CAMK1Q14012 370 aa14.81□□□□□ -0.04
LDLR-204ENST00000545707 C6orf132Q5T0Z8 1188 aa14.81□□□□□ -0.04
LDLR-204ENST00000545707 KIAA1211LQ6NV74 962 aa14.81□□□□□ -0.04
LDLR-204ENST00000545707 ABHD17CQ6PCB6 329 aa14.81□□□□□ -0.04
LDLR-204ENST00000545707 MARCH9Q86YJ5 346 aa14.81□□□□□ -0.04
LDLR-204ENST00000545707 NRMQ8IXM6 262 aa14.81□□□□□ -0.04
LDLR-204ENST00000545707 REM2Q8IYK8 340 aaPredicted RBP14.81□□□□□ -0.04
LDLR-204ENST00000545707 Q8N402 240 aa14.81□□□□□ -0.04
LDLR-204ENST00000545707 ZNF485Q8NCK3 441 aa14.81□□□□□ -0.04
LDLR-204ENST00000545707 ENKURQ8TC29 256 aa14.81□□□□□ -0.04
LDLR-204ENST00000545707 DIO2Q92813 273 aa14.81□□□□□ -0.04
LDLR-204ENST00000545707 COL26A1Q96A83 441 aa14.81□□□□□ -0.04
LDLR-204ENST00000545707 ARSGQ96EG1 525 aa14.81□□□□□ -0.04
LDLR-204ENST00000545707 PAWRQ96IZ0 340 aaKnown RBP14.81□□□□□ -0.04
LDLR-204ENST00000545707 SLC38A2Q96QD8 506 aa14.81□□□□□ -0.04
LDLR-204ENST00000545707 MRPS30Q9NP92 439 aaKnown RBP14.81□□□□□ -0.04
LDLR-204ENST00000545707 MRPS18AQ9NVS2 196 aaKnown RBP14.81□□□□□ -0.04
LDLR-204ENST00000545707 LIPT1Q9Y234 373 aa14.81□□□□□ -0.04
LDLR-204ENST00000545707 GSTK1Q9Y2Q3 226 aa14.81□□□□□ -0.04
LDLR-204ENST00000545707 ANKRD34BA5PLL1 514 aa14.8□□□□□ -0.04
LDLR-204ENST00000545707 HRO43593 1189 aa14.8□□□□□ -0.04
LDLR-204ENST00000545707 ALPPP05187 535 aa14.8□□□□□ -0.04
LDLR-204ENST00000545707 CCNYL3P0C7X3 344 aa14.8□□□□□ -0.04
LDLR-204ENST00000545707 SLC2A2P11168 524 aaPredicted RBP14.8□□□□□ -0.04
LDLR-204ENST00000545707 PSKH1P11801 424 aa14.8□□□□□ -0.04
LDLR-204ENST00000545707 FUT1P19526 365 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms