RNA–Protein interactions for RNA: ENST00000545688.5

SNHG1-224, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3

Gene SNHG1, Length 610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-224ENST00000545688 IGKV3-11P04433 115 aa3.06□□□□□ -1.92
SNHG1-224ENST00000545688 HOXB7P09629 217 aa3.06□□□□□ -1.92
SNHG1-224ENST00000545688 SBK2P0C263 348 aa3.06□□□□□ -1.92
SNHG1-224ENST00000545688 PTPRZ1P23471 2315 aaPredicted RBP3.06□□□□□ -1.92
SNHG1-224ENST00000545688 SOAT1P35610 550 aa3.06□□□□□ -1.92
SNHG1-224ENST00000545688 ARHGDIAP52565 204 aa3.06□□□□□ -1.92
SNHG1-224ENST00000545688 MFAP2P55001 183 aa3.06□□□□□ -1.92
SNHG1-224ENST00000545688 NUCB1Q02818 461 aa3.06□□□□□ -1.92
SNHG1-224ENST00000545688 SPHARQ15513 63 aa3.06□□□□□ -1.92
SNHG1-224ENST00000545688 ACER2Q5QJU3 275 aa3.06□□□□□ -1.92
SNHG1-224ENST00000545688 PODNL1Q6PEZ8 512 aa3.06□□□□□ -1.92
SNHG1-224ENST00000545688 C17orf64Q86WR6 236 aa3.06□□□□□ -1.92
SNHG1-224ENST00000545688 OR8H2Q8N162 312 aa3.06□□□□□ -1.92
SNHG1-224ENST00000545688 CRYGNQ8WXF5 182 aa3.06□□□□□ -1.92
SNHG1-224ENST00000545688 PARK7Q99497 189 aaKnown RBP3.06□□□□□ -1.92
SNHG1-224ENST00000545688 LRRC2Q9BYS8 371 aa3.06□□□□□ -1.92
SNHG1-224ENST00000545688 CUEDC2Q9H467 287 aa3.06□□□□□ -1.92
SNHG1-224ENST00000545688 TDRD3Q9H7E2 651 aaKnown RBP3.06□□□□□ -1.92
SNHG1-224ENST00000545688 TIGARQ9NQ88 270 aa3.06□□□□□ -1.92
SNHG1-224ENST00000545688 SEC14L4Q9UDX3 406 aa3.06□□□□□ -1.92
SNHG1-224ENST00000545688 PRODH2Q9UF12 536 aa3.06□□□□□ -1.92
SNHG1-224ENST00000545688 NUDCQ9Y266 331 aa3.06□□□□□ -1.92
SNHG1-224ENST00000545688 MYO9BQ13459 2157 aa3.05□□□□□ -1.92
SNHG1-224ENST00000545688 PANO1I0J062 215 aa3.05□□□□□ -1.92
SNHG1-224ENST00000545688 CHUKO15111 745 aa3.05□□□□□ -1.92
SNHG1-224ENST00000545688 GJB5O95377 273 aa3.05□□□□□ -1.92
SNHG1-224ENST00000545688 IGKV5-2P06315 115 aa3.05□□□□□ -1.92
SNHG1-224ENST00000545688 MEF2DQ14814 521 aa3.05□□□□□ -1.92
SNHG1-224ENST00000545688 MICAQ29983 383 aa3.05□□□□□ -1.92
SNHG1-224ENST00000545688 APOBEC3HQ6NTF7 200 aaKnown RBP3.05□□□□□ -1.92
SNHG1-224ENST00000545688 Q6ZRG5 221 aa3.05□□□□□ -1.92
SNHG1-224ENST00000545688 LAX1Q8IWV1 398 aa3.05□□□□□ -1.92
SNHG1-224ENST00000545688 CEND1Q8N111 149 aa3.05□□□□□ -1.92
SNHG1-224ENST00000545688 PRCCQ92733 491 aaPredicted RBP3.05□□□□□ -1.92
SNHG1-224ENST00000545688 OR5M11Q96RB7 305 aa3.05□□□□□ -1.92
SNHG1-224ENST00000545688 SSX3Q99909 188 aa3.05□□□□□ -1.92
SNHG1-224ENST00000545688 ZNF559Q9BR84 538 aa3.05□□□□□ -1.92
SNHG1-224ENST00000545688 RNF41Q9H4P4 317 aaPredicted RBP3.05□□□□□ -1.92
SNHG1-224ENST00000545688 KLRF1Q9NZS2 232 aa3.05□□□□□ -1.92
SNHG1-224ENST00000545688 TMEM9Q9P0T7 183 aa3.05□□□□□ -1.92
SNHG1-224ENST00000545688 GTF3C1Q12789 2109 aa3.05□□□□□ -1.92
SNHG1-224ENST00000545688 CFAP47Q6ZTR5 3102 aa3.05□□□□□ -1.92
SNHG1-224ENST00000545688 ECM29Q5VYK3 1845 aa3.05□□□□□ -1.92
SNHG1-224ENST00000545688 MYO15AQ9UKN7 3530 aa3.05□□□□□ -1.92
SNHG1-224ENST00000545688 CHD8Q9HCK8 2581 aa3.05□□□□□ -1.92
SNHG1-224ENST00000545688 CACNA1GO43497 2377 aa3.04□□□□□ -1.92
SNHG1-224ENST00000545688 CACNA1BQ00975 2339 aa3.04□□□□□ -1.92
SNHG1-224ENST00000545688 TRIOO75962 3097 aa3.04□□□□□ -1.92
SNHG1-224ENST00000545688 EPG5Q9HCE0 2579 aa3.04□□□□□ -1.92
SNHG1-224ENST00000545688 TRAV34A0A0B4J273 112 aa3.04□□□□□ -1.92
SNHG1-224ENST00000545688 HSFX4A0A1B0GTS1 333 aaPredicted RBP3.04□□□□□ -1.92
SNHG1-224ENST00000545688 HSFX3A0A1B0GWH4 333 aaPredicted RBP3.04□□□□□ -1.92
SNHG1-224ENST00000545688 MAGEB16A2A368 324 aa3.04□□□□□ -1.92
SNHG1-224ENST00000545688 TRABD2BA6NFA1 517 aa3.04□□□□□ -1.92
SNHG1-224ENST00000545688 H0YIG0 161 aa3.04□□□□□ -1.92
SNHG1-224ENST00000545688 STAM2O75886 525 aa3.04□□□□□ -1.92
SNHG1-224ENST00000545688 LAMP1P11279 417 aa3.04□□□□□ -1.92
SNHG1-224ENST00000545688 KCTD2Q14681 263 aa3.04□□□□□ -1.92
SNHG1-224ENST00000545688 WSCD2Q2TBF2 565 aa3.04□□□□□ -1.92
SNHG1-224ENST00000545688 TMEM31Q5JXX7 168 aa3.04□□□□□ -1.92
SNHG1-224ENST00000545688 CELF3Q5SZQ8 465 aaKnown RBP3.04□□□□□ -1.92
SNHG1-224ENST00000545688 ITIH5Q86UX2 942 aa3.04□□□□□ -1.92
SNHG1-224ENST00000545688 AQP12AQ8IXF9 295 aa3.04□□□□□ -1.92
SNHG1-224ENST00000545688 GOLGA5Q8TBA6 731 aa3.04□□□□□ -1.92
SNHG1-224ENST00000545688 HES7Q9BYE0 225 aa3.04□□□□□ -1.92
SNHG1-224ENST00000545688 ISG20L2Q9H9L3 353 aaKnown RBP3.04□□□□□ -1.92
SNHG1-224ENST00000545688 HYPKQ9NX55 129 aa3.04□□□□□ -1.92
SNHG1-224ENST00000545688 CWC25Q9NXE8 425 aaPredicted RBP3.04□□□□□ -1.92
SNHG1-224ENST00000545688 TRANK1O15050 2925 aa3.04□□□□□ -1.92
SNHG1-224ENST00000545688 DDX60LQ5H9U9 1706 aaKnown RBP3.04□□□□□ -1.92
SNHG1-224ENST00000545688 ARAP2Q8WZ64 1704 aa3.04□□□□□ -1.92
SNHG1-224ENST00000545688 SPTBN4Q9H254 2564 aa3.04□□□□□ -1.92
SNHG1-224ENST00000545688 RIF1Q5UIP0 2472 aaKnown RBP3.03□□□□□ -1.92
SNHG1-224ENST00000545688 TPRP12270 2363 aaKnown RBP3.03□□□□□ -1.92
SNHG1-224ENST00000545688 BRWD1Q9NSI6 2320 aa3.03□□□□□ -1.92
SNHG1-224ENST00000545688 LTBP2Q14767 1821 aa3.03□□□□□ -1.92
SNHG1-224ENST00000545688 DNAH14Q0VDD8 3507 aa3.03□□□□□ -1.92
SNHG1-224ENST00000545688 A0A087X0K7 114 aa3.03□□□□□ -1.92
SNHG1-224ENST00000545688 SLC15A5A6NIM6 579 aa3.03□□□□□ -1.92
SNHG1-224ENST00000545688 A8MX80 341 aa3.03□□□□□ -1.92
SNHG1-224ENST00000545688 ACTL6AO96019 429 aa3.03□□□□□ -1.92
SNHG1-224ENST00000545688 GSTA2P09210 222 aa3.03□□□□□ -1.92
SNHG1-224ENST00000545688 ZNF853P0CG23 659 aa3.03□□□□□ -1.92
SNHG1-224ENST00000545688 CPN1P15169 458 aa3.03□□□□□ -1.92
SNHG1-224ENST00000545688 ZNF17P17021 662 aa3.03□□□□□ -1.92
SNHG1-224ENST00000545688 GP5P40197 560 aa3.03□□□□□ -1.92
SNHG1-224ENST00000545688 KCNJ1P48048 391 aa3.03□□□□□ -1.92
SNHG1-224ENST00000545688 WNT4P56705 351 aa3.03□□□□□ -1.92
SNHG1-224ENST00000545688 P2RY14Q15391 338 aa3.03□□□□□ -1.92
SNHG1-224ENST00000545688 ACKR1Q16570 336 aa3.03□□□□□ -1.92
SNHG1-224ENST00000545688 CAVIN1Q6NZI2 390 aaKnown RBP3.03□□□□□ -1.92
SNHG1-224ENST00000545688 TATDN1Q6P1N9 297 aa3.03□□□□□ -1.92
SNHG1-224ENST00000545688 ZNF677Q86XU0 584 aa3.03□□□□□ -1.92
SNHG1-224ENST00000545688 Q8N9G6 341 aaPredicted RBP3.03□□□□□ -1.92
SNHG1-224ENST00000545688 UBLCP1Q8WVY7 318 aaPredicted RBP3.03□□□□□ -1.92
SNHG1-224ENST00000545688 FAM151AQ8WW52 585 aa3.03□□□□□ -1.92
SNHG1-224ENST00000545688 CORO2AQ92828 525 aa3.03□□□□□ -1.92
SNHG1-224ENST00000545688 CFAP53Q96M91 514 aa3.03□□□□□ -1.92
SNHG1-224ENST00000545688 GBP5Q96PP8 586 aa3.03□□□□□ -1.92
SNHG1-224ENST00000545688 BAG1Q99933 345 aaPredicted RBP3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms