RNA–Protein interactions for RNA: ENST00000545493.1

SCARB1-210, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-210ENST00000545493 SLC24A3Q9HC58 644 aa19.2■□□□□ 0.66
SCARB1-210ENST00000545493 TAS2R9Q9NYW1 312 aa19.2■□□□□ 0.66
SCARB1-210ENST00000545493 NPIPB8E9PQR5 432 aa19.19■□□□□ 0.66
SCARB1-210ENST00000545493 CBR3O75828 277 aa19.19■□□□□ 0.66
SCARB1-210ENST00000545493 SLITRK5O94991 958 aa19.19■□□□□ 0.66
SCARB1-210ENST00000545493 ZWINTO95229 277 aa19.19■□□□□ 0.66
SCARB1-210ENST00000545493 IL2RAP01589 272 aa19.19■□□□□ 0.66
SCARB1-210ENST00000545493 CYP4B1P13584 511 aa19.19■□□□□ 0.66
SCARB1-210ENST00000545493 CPA3P15088 417 aa19.19■□□□□ 0.66
SCARB1-210ENST00000545493 NTSP30990 170 aa19.19■□□□□ 0.66
SCARB1-210ENST00000545493 SRD5A2P31213 254 aa19.19■□□□□ 0.66
SCARB1-210ENST00000545493 UQCRC1P31930 480 aa19.19■□□□□ 0.66
SCARB1-210ENST00000545493 PNLIPRP2P54317 469 aa19.19■□□□□ 0.66
SCARB1-210ENST00000545493 CES4AQ5XG92 561 aa19.19■□□□□ 0.66
SCARB1-210ENST00000545493 IFNEQ86WN2 208 aa19.19■□□□□ 0.66
SCARB1-210ENST00000545493 C10orf107Q8IVU9 208 aa19.19■□□□□ 0.66
SCARB1-210ENST00000545493 OR2T11Q8NH01 316 aa19.19■□□□□ 0.66
SCARB1-210ENST00000545493 NRGNQ92686 78 aa19.19■□□□□ 0.66
SCARB1-210ENST00000545493 EGLN2Q96KS0 407 aa19.19■□□□□ 0.66
SCARB1-210ENST00000545493 FCRL1Q96LA6 429 aa19.19■□□□□ 0.66
SCARB1-210ENST00000545493 AMDHD1Q96NU7 426 aa19.19■□□□□ 0.66
SCARB1-210ENST00000545493 TUBA1CQ9BQE3 449 aa19.19■□□□□ 0.66
SCARB1-210ENST00000545493 G6PC3Q9BUM1 346 aa19.19■□□□□ 0.66
SCARB1-210ENST00000545493 RRAGDQ9NQL2 400 aaPredicted RBP19.19■□□□□ 0.66
SCARB1-210ENST00000545493 MKS1Q9NXB0 559 aa19.19■□□□□ 0.66
SCARB1-210ENST00000545493 TAS2R7Q9NYW3 318 aa19.19■□□□□ 0.66
SCARB1-210ENST00000545493 FLRT3Q9NZU0 649 aa19.19■□□□□ 0.66
SCARB1-210ENST00000545493 CRIM1Q9NZV1 1036 aa19.19■□□□□ 0.66
SCARB1-210ENST00000545493 ZNF629Q9UEG4 869 aaPredicted RBP19.19■□□□□ 0.66
SCARB1-210ENST00000545493 C19orf53Q9UNZ5 99 aaPredicted RBP19.19■□□□□ 0.66
SCARB1-210ENST00000545493 UPK1AO00322 258 aa19.18■□□□□ 0.66
SCARB1-210ENST00000545493 PLOD2O00469 737 aa19.18■□□□□ 0.66
SCARB1-210ENST00000545493 GRK2P25098 689 aa19.18■□□□□ 0.66
SCARB1-210ENST00000545493 EVI2BP34910 448 aa19.18■□□□□ 0.66
SCARB1-210ENST00000545493 KRT20P35900 424 aa19.18■□□□□ 0.66
SCARB1-210ENST00000545493 PLXDC2Q6UX71 529 aa19.18■□□□□ 0.66
SCARB1-210ENST00000545493 ADGRE4PQ86SQ3 457 aa19.18■□□□□ 0.66
SCARB1-210ENST00000545493 OR2L13Q8N349 312 aa19.18■□□□□ 0.66
SCARB1-210ENST00000545493 OR2W6PQ8NHA6 318 aa19.18■□□□□ 0.66
SCARB1-210ENST00000545493 ZPLD1Q8TCW7 415 aa19.18■□□□□ 0.66
SCARB1-210ENST00000545493 RNASE6Q93091 150 aaKnown RBP19.18■□□□□ 0.66
SCARB1-210ENST00000545493 GATA5Q9BWX5 397 aaPredicted RBP19.18■□□□□ 0.66
SCARB1-210ENST00000545493 ANKZF1Q9H8Y5 726 aa19.18■□□□□ 0.66
SCARB1-210ENST00000545493 TAS2R10Q9NYW0 307 aa19.18■□□□□ 0.66
SCARB1-210ENST00000545493 OR10H1Q9Y4A9 318 aa19.18■□□□□ 0.66
SCARB1-210ENST00000545493 ZFHX3Q15911 3703 aa19.18■□□□□ 0.66
SCARB1-210ENST00000545493 SPG11Q96JI7 2443 aa19.17■□□□□ 0.66
SCARB1-210ENST00000545493 H0Y3Z8 333 aa19.17■□□□□ 0.66
SCARB1-210ENST00000545493 SYT5O00445 386 aa19.17■□□□□ 0.66
SCARB1-210ENST00000545493 CPN1P15169 458 aa19.17■□□□□ 0.66
SCARB1-210ENST00000545493 GCKP35557 465 aa19.17■□□□□ 0.66
SCARB1-210ENST00000545493 LHX2P50458 406 aa19.17■□□□□ 0.66
SCARB1-210ENST00000545493 AGFG1P52594 562 aaKnown RBP19.17■□□□□ 0.66
SCARB1-210ENST00000545493 RCAN2Q14206 197 aa19.17■□□□□ 0.66
SCARB1-210ENST00000545493 SF3B4Q15427 424 aaKnown RBP eCLIP19.17■□□□□ 0.66
SCARB1-210ENST00000545493 OR5M10Q6IEU7 315 aa19.17■□□□□ 0.66
SCARB1-210ENST00000545493 APOPT1Q96IL0 206 aa19.17■□□□□ 0.66
SCARB1-210ENST00000545493 TUBB1Q9H4B7 451 aa19.17■□□□□ 0.66
SCARB1-210ENST00000545493 CALHM2Q9HA72 323 aa19.17■□□□□ 0.66
SCARB1-210ENST00000545493 DDX18Q9NVP1 670 aaKnown RBP19.17■□□□□ 0.66
SCARB1-210ENST00000545493 CLCF1Q9UBD9 225 aa19.17■□□□□ 0.66
SCARB1-210ENST00000545493 MID2Q9UJV3 735 aa19.17■□□□□ 0.66
SCARB1-210ENST00000545493 DKKL1Q9UK85 242 aa19.17■□□□□ 0.66
SCARB1-210ENST00000545493 WBP11Q9Y2W2 641 aaKnown RBP19.17■□□□□ 0.66
SCARB1-210ENST00000545493 FIS1Q9Y3D6 152 aa19.17■□□□□ 0.66
SCARB1-210ENST00000545493 AZIN1O14977 448 aa19.16■□□□□ 0.66
SCARB1-210ENST00000545493 SCO2O43819 266 aa19.16■□□□□ 0.66
SCARB1-210ENST00000545493 CTAG2O75638 210 aa19.16■□□□□ 0.66
SCARB1-210ENST00000545493 TCEA1P23193 301 aaKnown RBP19.16■□□□□ 0.66
SCARB1-210ENST00000545493 KIR2DL3P43628 341 aa19.16■□□□□ 0.66
SCARB1-210ENST00000545493 STARP49675 285 aa19.16■□□□□ 0.66
SCARB1-210ENST00000545493 CLDN18P56856 261 aa19.16■□□□□ 0.66
SCARB1-210ENST00000545493 ZNF385BQ569K4 471 aa19.16■□□□□ 0.66
SCARB1-210ENST00000545493 SH2D4BQ5SQS7 431 aa19.16■□□□□ 0.66
SCARB1-210ENST00000545493 KANK2Q63ZY3 851 aa19.16■□□□□ 0.66
SCARB1-210ENST00000545493 ANKRD26P1Q6NSI1 321 aa19.16■□□□□ 0.66
SCARB1-210ENST00000545493 RNF165Q6ZSG1 346 aa19.16■□□□□ 0.66
SCARB1-210ENST00000545493 Q6ZSR9 355 aa19.16■□□□□ 0.66
SCARB1-210ENST00000545493 TRIM42Q8IWZ5 723 aa19.16■□□□□ 0.66
SCARB1-210ENST00000545493 FADS6Q8N9I5 356 aa19.16■□□□□ 0.66
SCARB1-210ENST00000545493 GFM2Q969S9 779 aaKnown RBP19.16■□□□□ 0.66
SCARB1-210ENST00000545493 ELP4Q96EB1 424 aa19.16■□□□□ 0.66
SCARB1-210ENST00000545493 METTL2AQ96IZ6 378 aaKnown RBP19.16■□□□□ 0.66
SCARB1-210ENST00000545493 SFXN2Q96NB2 322 aa19.16■□□□□ 0.66
SCARB1-210ENST00000545493 LRTM1Q9HBL6 345 aa19.16■□□□□ 0.66
SCARB1-210ENST00000545493 JKAMPQ9P055 326 aa19.16■□□□□ 0.66
SCARB1-210ENST00000545493 CLCA1A8K7I4 914 aa19.15■□□□□ 0.66
SCARB1-210ENST00000545493 SDC1P18827 310 aa19.15■□□□□ 0.66
SCARB1-210ENST00000545493 CTSSP25774 331 aa19.15■□□□□ 0.66
SCARB1-210ENST00000545493 B3GALT5-AS1P59052 145 aa19.15■□□□□ 0.66
SCARB1-210ENST00000545493 SRYQ05066 204 aa19.15■□□□□ 0.66
SCARB1-210ENST00000545493 FOXF2Q12947 444 aa19.15■□□□□ 0.66
SCARB1-210ENST00000545493 FLYWCH1Q4VC44 716 aa19.15■□□□□ 0.66
SCARB1-210ENST00000545493 ENPP6Q6UWR7 440 aa19.15■□□□□ 0.66
SCARB1-210ENST00000545493 ZNF551Q7Z340 670 aaPredicted RBP19.15■□□□□ 0.66
SCARB1-210ENST00000545493 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP19.15■□□□□ 0.661e-10■■■■■ 65.8
SCARB1-210ENST00000545493 CIDECQ96AQ7 238 aaPredicted RBP19.15■□□□□ 0.66
SCARB1-210ENST00000545493 ZNF764Q96H86 408 aaPredicted RBP19.15■□□□□ 0.66
SCARB1-210ENST00000545493 CCT7Q99832 543 aa19.15■□□□□ 0.66
SCARB1-210ENST00000545493 GPATCH1Q9BRR8 931 aaKnown RBP19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms