RNA–Protein interactions for RNA: ENST00000545083.1

CHD4-212, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 511 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-212ENST00000545083 SLC35A4Q96G79 324 aa8.39□□□□□ -1.07
CHD4-212ENST00000545083 RHOJQ9H4E5 214 aa8.39□□□□□ -1.07
CHD4-212ENST00000545083 ANKRA2Q9H9E1 313 aa8.39□□□□□ -1.07
CHD4-212ENST00000545083 BARX1Q9HBU1 254 aaPredicted RBP8.39□□□□□ -1.07
CHD4-212ENST00000545083 SMYD2Q9NRG4 433 aa8.39□□□□□ -1.07
CHD4-212ENST00000545083 WHRNQ9P202 907 aa8.39□□□□□ -1.07
CHD4-212ENST00000545083 CES1P1Q9UKY3 287 aa8.39□□□□□ -1.07
CHD4-212ENST00000545083 CFL2Q9Y281 166 aa8.39□□□□□ -1.07
CHD4-212ENST00000545083 B3GALT5Q9Y2C3 310 aa8.39□□□□□ -1.07
CHD4-212ENST00000545083 GPR52Q9Y2T5 361 aa8.39□□□□□ -1.07
CHD4-212ENST00000545083 GPR55Q9Y2T6 319 aaPredicted RBP8.39□□□□□ -1.07
CHD4-212ENST00000545083 EMC9Q9Y3B6 208 aa8.39□□□□□ -1.07
CHD4-212ENST00000545083 TSC22D4Q9Y3Q8 395 aa8.39□□□□□ -1.07
CHD4-212ENST00000545083 TEX264Q9Y6I9 313 aa8.39□□□□□ -1.07
CHD4-212ENST00000545083 ELOA3DA6NLF2 546 aaPredicted RBP8.38□□□□□ -1.07
CHD4-212ENST00000545083 SHISA8B8ZZ34 492 aa8.38□□□□□ -1.07
CHD4-212ENST00000545083 K7EPI3 171 aa8.38□□□□□ -1.07
CHD4-212ENST00000545083 UBFD1O14562 309 aaKnown RBP8.38□□□□□ -1.07
CHD4-212ENST00000545083 SCO2O43819 266 aa8.38□□□□□ -1.07
CHD4-212ENST00000545083 LMX1BO60663 402 aa8.38□□□□□ -1.07
CHD4-212ENST00000545083 SS18L1O75177 396 aaPredicted RBP8.38□□□□□ -1.07
CHD4-212ENST00000545083 GCM2O75603 506 aaPredicted RBP8.38□□□□□ -1.07
CHD4-212ENST00000545083 CT45A8P0DMV1 189 aa8.38□□□□□ -1.07
CHD4-212ENST00000545083 CT45A9P0DMV2 189 aa8.38□□□□□ -1.07
CHD4-212ENST00000545083 PCSK2P16519 638 aa8.38□□□□□ -1.07
CHD4-212ENST00000545083 IL11P20809 199 aa8.38□□□□□ -1.07
CHD4-212ENST00000545083 PIK3CGP48736 1102 aa8.38□□□□□ -1.07
CHD4-212ENST00000545083 CORO7P57737 925 aa8.38□□□□□ -1.07
CHD4-212ENST00000545083 ATP6V0D1P61421 351 aa8.38□□□□□ -1.07
CHD4-212ENST00000545083 IRX1P78414 480 aaPredicted RBP8.38□□□□□ -1.07
CHD4-212ENST00000545083 MRPS35P82673 323 aaKnown RBP8.38□□□□□ -1.07
CHD4-212ENST00000545083 CUL3Q13618 768 aa8.38□□□□□ -1.07
CHD4-212ENST00000545083 TAB1Q15750 504 aa8.38□□□□□ -1.07
CHD4-212ENST00000545083 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.38□□□□□ -1.07
CHD4-212ENST00000545083 ELOA3BQ3SY89 546 aa8.38□□□□□ -1.07
CHD4-212ENST00000545083 CT45A2Q5DJT8 189 aa8.38□□□□□ -1.07
CHD4-212ENST00000545083 UBAP2Q5T6F2 1119 aaKnown RBP8.38□□□□□ -1.07
CHD4-212ENST00000545083 PPP4R4Q6NUP7 873 aa8.38□□□□□ -1.07
CHD4-212ENST00000545083 FAM180BQ6P0A1 224 aa8.38□□□□□ -1.07
CHD4-212ENST00000545083 NPSR1Q6W5P4 371 aa8.38□□□□□ -1.07
CHD4-212ENST00000545083 DNAJC14Q6Y2X3 702 aaPredicted RBP8.38□□□□□ -1.07
CHD4-212ENST00000545083 GGNQ86UU5 652 aa8.38□□□□□ -1.07
CHD4-212ENST00000545083 DTX2Q86UW9 622 aa8.38□□□□□ -1.07
CHD4-212ENST00000545083 TEX9Q8N6V9 391 aa8.38□□□□□ -1.07
CHD4-212ENST00000545083 ELOA3Q8NG57 546 aa8.38□□□□□ -1.07
CHD4-212ENST00000545083 UBTD2Q8WUN7 234 aa8.38□□□□□ -1.07
CHD4-212ENST00000545083 HTRA1Q92743 480 aa8.38□□□□□ -1.07
CHD4-212ENST00000545083 C1orf159Q96HA4 380 aa8.38□□□□□ -1.07
CHD4-212ENST00000545083 TACO1Q9BSH4 297 aaKnown RBP8.38□□□□□ -1.07
CHD4-212ENST00000545083 RTN4RQ9BZR6 473 aa8.38□□□□□ -1.07
CHD4-212ENST00000545083 TRIM2Q9C040 744 aa8.38□□□□□ -1.07
CHD4-212ENST00000545083 STMN4Q9H169 189 aaPredicted RBP8.38□□□□□ -1.07
CHD4-212ENST00000545083 OR10A4Q9H209 315 aa8.38□□□□□ -1.07
CHD4-212ENST00000545083 ALG9Q9H6U8 611 aa8.38□□□□□ -1.07
CHD4-212ENST00000545083 MANSC1Q9H8J5 431 aa8.38□□□□□ -1.07
CHD4-212ENST00000545083 L2HGDHQ9H9P8 463 aa8.38□□□□□ -1.07
CHD4-212ENST00000545083 FOLH1BQ9HBA9 442 aa8.38□□□□□ -1.07
CHD4-212ENST00000545083 ZBTB26Q9HCK0 441 aa8.38□□□□□ -1.07
CHD4-212ENST00000545083 MED11Q9P086 117 aa8.38□□□□□ -1.07
CHD4-212ENST00000545083 OPTCQ9UBM4 332 aa8.38□□□□□ -1.07
CHD4-212ENST00000545083 PLCE1Q9P212 2302 aa8.38□□□□□ -1.07
CHD4-212ENST00000545083 UQCRHLA0A096LP55 91 aa8.37□□□□□ -1.07
CHD4-212ENST00000545083 DPRXA6NFQ7 191 aa8.37□□□□□ -1.07
CHD4-212ENST00000545083 UBXN8O00124 270 aa8.37□□□□□ -1.07
CHD4-212ENST00000545083 RAMP1O60894 148 aa8.37□□□□□ -1.07
CHD4-212ENST00000545083 NTN1O95631 604 aa8.37□□□□□ -1.07
CHD4-212ENST00000545083 ALDOAP04075 364 aaKnown RBP8.37□□□□□ -1.07
CHD4-212ENST00000545083 S100BP04271 92 aaPredicted RBP8.37□□□□□ -1.07
CHD4-212ENST00000545083 ATP1B1P05026 303 aa8.37□□□□□ -1.07
CHD4-212ENST00000545083 PGRP06401 933 aa8.37□□□□□ -1.07
CHD4-212ENST00000545083 KLK1P06870 262 aa8.37□□□□□ -1.07
CHD4-212ENST00000545083 FCGR2AP12318 317 aa8.37□□□□□ -1.07
CHD4-212ENST00000545083 IVDP26440 423 aa8.37□□□□□ -1.07
CHD4-212ENST00000545083 CFPP27918 469 aa8.37□□□□□ -1.07
CHD4-212ENST00000545083 NUDT6P53370 316 aa8.37□□□□□ -1.07
CHD4-212ENST00000545083 SLC12A2P55011 1212 aa8.37□□□□□ -1.07
CHD4-212ENST00000545083 CTBP2P56545 445 aa8.37□□□□□ -1.07
CHD4-212ENST00000545083 C21orf58P58505 322 aa8.37□□□□□ -1.07
CHD4-212ENST00000545083 POU4F1Q01851 419 aa8.37□□□□□ -1.07
CHD4-212ENST00000545083 BSPH1Q075Z2 132 aa8.37□□□□□ -1.07
CHD4-212ENST00000545083 DLG1Q12959 904 aa8.37□□□□□ -1.07
CHD4-212ENST00000545083 FRG1Q14331 258 aaKnown RBP8.37□□□□□ -1.07
CHD4-212ENST00000545083 SLMAPQ14BN4 828 aa8.37□□□□□ -1.07
CHD4-212ENST00000545083 FASTKD3Q14CZ7 662 aaKnown RBP8.37□□□□□ -1.07
CHD4-212ENST00000545083 SGCBQ16585 318 aa8.37□□□□□ -1.07
CHD4-212ENST00000545083 FAM120AOSQ5T036 256 aa8.37□□□□□ -1.07
CHD4-212ENST00000545083 CYB5R2Q6BCY4 276 aa8.37□□□□□ -1.07
CHD4-212ENST00000545083 MFSD12Q6NUT3 480 aa8.37□□□□□ -1.07
CHD4-212ENST00000545083 SLC48A1Q6P1K1 146 aa8.37□□□□□ -1.07
CHD4-212ENST00000545083 FIGNL1Q6PIW4 674 aa8.37□□□□□ -1.07
CHD4-212ENST00000545083 BEND4Q6ZU67 534 aa8.37□□□□□ -1.07
CHD4-212ENST00000545083 LARP4Q71RC2 724 aaKnown RBP eCLIP8.37□□□□□ -1.07
CHD4-212ENST00000545083 ANKMY2Q8IV38 441 aa8.37□□□□□ -1.07
CHD4-212ENST00000545083 ZNF525Q8N782 197 aa8.37□□□□□ -1.07
CHD4-212ENST00000545083 GBP7Q8N8V2 638 aaPredicted RBP8.37□□□□□ -1.07
CHD4-212ENST00000545083 OR4N2Q8NGD1 307 aa8.37□□□□□ -1.07
CHD4-212ENST00000545083 WDR20Q8TBZ3 569 aa8.37□□□□□ -1.07
CHD4-212ENST00000545083 GFM2Q969S9 779 aaKnown RBP8.37□□□□□ -1.07
CHD4-212ENST00000545083 EFHD2Q96C19 240 aaPredicted RBP8.37□□□□□ -1.07
CHD4-212ENST00000545083 DTNBP1Q96EV8 351 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms