RNA–Protein interactions for RNA: ENST00000544750.1

USP28-212, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 5

Gene USP28, Length 542 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-212ENST00000544750 TEX9Q8N6V9 391 aa11.56□□□□□ -0.56
USP28-212ENST00000544750 ZNF611Q8N823 705 aa11.56□□□□□ -0.56
USP28-212ENST00000544750 ZNF610Q8N9Z0 462 aa11.56□□□□□ -0.56
USP28-212ENST00000544750 MAPK1IP1LQ8NDC0 245 aa11.56□□□□□ -0.56
USP28-212ENST00000544750 RHEBL1Q8TAI7 183 aa11.56□□□□□ -0.56
USP28-212ENST00000544750 ZNF845Q96IR2 970 aaPredicted RBP11.56□□□□□ -0.56
USP28-212ENST00000544750 SFXN2Q96NB2 322 aa11.56□□□□□ -0.56
USP28-212ENST00000544750 SLC39A3Q9BRY0 314 aa11.56□□□□□ -0.56
USP28-212ENST00000544750 TMEM204Q9BSN7 226 aa11.56□□□□□ -0.56
USP28-212ENST00000544750 PRM3Q9NNZ6 103 aa11.56□□□□□ -0.56
USP28-212ENST00000544750 EHD3Q9NZN3 535 aa11.56□□□□□ -0.56
USP28-212ENST00000544750 CFL2Q9Y281 166 aa11.56□□□□□ -0.56
USP28-212ENST00000544750 EXOC1LA0A1B0GW35 172 aa11.55□□□□□ -0.56
USP28-212ENST00000544750 OR6C70A6NIJ9 312 aa11.55□□□□□ -0.56
USP28-212ENST00000544750 SUPT3HB4E1H0 165 aa11.55□□□□□ -0.56
USP28-212ENST00000544750 TRIM49D1C9J1S8 452 aa11.55□□□□□ -0.56
USP28-212ENST00000544750 RNF223E7ERA6 249 aa11.55□□□□□ -0.56
USP28-212ENST00000544750 FOXE1O00358 373 aaPredicted RBP11.55□□□□□ -0.56
USP28-212ENST00000544750 UGDHO60701 494 aa11.55□□□□□ -0.56
USP28-212ENST00000544750 SUPT3HO75486 399 aa11.55□□□□□ -0.56
USP28-212ENST00000544750 SEMA3DO95025 777 aa11.55□□□□□ -0.56
USP28-212ENST00000544750 ATP1B1P05026 303 aa11.55□□□□□ -0.56
USP28-212ENST00000544750 NT5EP21589 574 aa11.55□□□□□ -0.56
USP28-212ENST00000544750 TBXA2RP21731 343 aa11.55□□□□□ -0.56
USP28-212ENST00000544750 DRD5P21918 477 aa11.55□□□□□ -0.56
USP28-212ENST00000544750 PPICP45877 212 aa11.55□□□□□ -0.56
USP28-212ENST00000544750 EMDP50402 254 aa11.55□□□□□ -0.56
USP28-212ENST00000544750 SUCLG1P53597 346 aaKnown RBP11.55□□□□□ -0.56
USP28-212ENST00000544750 DUSP2Q05923 314 aa11.55□□□□□ -0.56
USP28-212ENST00000544750 SLC29A2Q14542 456 aa11.55□□□□□ -0.56
USP28-212ENST00000544750 ACAP2Q15057 778 aa11.55□□□□□ -0.56
USP28-212ENST00000544750 BEX5Q5H9J7 111 aa11.55□□□□□ -0.56
USP28-212ENST00000544750 ANKRD34AQ69YU3 496 aa11.55□□□□□ -0.56
USP28-212ENST00000544750 ZNF704Q6ZNC4 412 aaPredicted RBP11.55□□□□□ -0.56
USP28-212ENST00000544750 P4HA3Q7Z4N8 544 aa11.55□□□□□ -0.56
USP28-212ENST00000544750 L3MBTL4Q8NA19 623 aa11.55□□□□□ -0.56
USP28-212ENST00000544750 SLC35A4Q96G79 324 aa11.55□□□□□ -0.56
USP28-212ENST00000544750 VPS11Q9H270 941 aa11.55□□□□□ -0.56
USP28-212ENST00000544750 CXorf56Q9H5V9 222 aa11.55□□□□□ -0.56
USP28-212ENST00000544750 RNF122Q9H9V4 155 aa11.55□□□□□ -0.56
USP28-212ENST00000544750 ALPK2Q86TB3 2170 aa11.54□□□□□ -0.56
USP28-212ENST00000544750 CCDC189A1A4V9 331 aa11.54□□□□□ -0.56
USP28-212ENST00000544750 C17orf51A8MQB3 221 aa11.54□□□□□ -0.56
USP28-212ENST00000544750 H0YC42 278 aa11.54□□□□□ -0.56
USP28-212ENST00000544750 OVOL3O00110 214 aa11.54□□□□□ -0.56
USP28-212ENST00000544750 HS3ST1O14792 307 aa11.54□□□□□ -0.56
USP28-212ENST00000544750 TLX2O43763 284 aaPredicted RBP11.54□□□□□ -0.56
USP28-212ENST00000544750 CD5LO43866 347 aa11.54□□□□□ -0.56
USP28-212ENST00000544750 TSPAN2O60636 221 aa11.54□□□□□ -0.56
USP28-212ENST00000544750 TNFRSF21O75509 655 aa11.54□□□□□ -0.56
USP28-212ENST00000544750 F12P00748 615 aaPredicted RBP11.54□□□□□ -0.56
USP28-212ENST00000544750 C8BP07358 591 aa11.54□□□□□ -0.56
USP28-212ENST00000544750 THBS1P07996 1170 aa11.54□□□□□ -0.56
USP28-212ENST00000544750 PEPDP12955 493 aa11.54□□□□□ -0.56
USP28-212ENST00000544750 DPP4P27487 766 aa11.54□□□□□ -0.56
USP28-212ENST00000544750 NEK2P51955 445 aa11.54□□□□□ -0.56
USP28-212ENST00000544750 TPD52P55327 224 aaPredicted RBP11.54□□□□□ -0.56
USP28-212ENST00000544750 SIRPAP78324 504 aa11.54□□□□□ -0.56
USP28-212ENST00000544750 PHEXP78562 749 aa11.54□□□□□ -0.56
USP28-212ENST00000544750 CPSF6Q16630 551 aaKnown RBP eCLIP11.54□□□□□ -0.56
USP28-212ENST00000544750 CLEC12BQ2HXU8 276 aa11.54□□□□□ -0.56
USP28-212ENST00000544750 FAM83EQ2M2I3 478 aa11.54□□□□□ -0.56
USP28-212ENST00000544750 C6orf163Q5TEZ5 329 aa11.54□□□□□ -0.56
USP28-212ENST00000544750 SLC48A1Q6P1K1 146 aa11.54□□□□□ -0.56
USP28-212ENST00000544750 DNM1P46Q6ZS02 220 aa11.54□□□□□ -0.56
USP28-212ENST00000544750 MZB1Q8WU39 189 aa11.54□□□□□ -0.56
USP28-212ENST00000544750 TMEM158Q8WZ71 300 aa11.54□□□□□ -0.56
USP28-212ENST00000544750 TMBIM1Q969X1 311 aa11.54□□□□□ -0.56
USP28-212ENST00000544750 REPS1Q96D71 796 aa11.54□□□□□ -0.56
USP28-212ENST00000544750 TMCO6Q96DC7 493 aa11.54□□□□□ -0.56
USP28-212ENST00000544750 COL21A1Q96P44 957 aa11.54□□□□□ -0.56
USP28-212ENST00000544750 BRINP2Q9C0B6 783 aa11.54□□□□□ -0.56
USP28-212ENST00000544750 ADAM29Q9UKF5 820 aa11.54□□□□□ -0.56
USP28-212ENST00000544750 GPR55Q9Y2T6 319 aaPredicted RBP11.54□□□□□ -0.56
USP28-212ENST00000544750 PLLPQ9Y342 182 aa11.54□□□□□ -0.56
USP28-212ENST00000544750 RNF11Q9Y3C5 154 aa11.54□□□□□ -0.56
USP28-212ENST00000544750 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.54□□□□□ -0.56
USP28-212ENST00000544750 ESPNB1AK53 854 aa11.53□□□□□ -0.56
USP28-212ENST00000544750 IFNA2P01563 188 aa11.53□□□□□ -0.56
USP28-212ENST00000544750 SHBGP04278 402 aa11.53□□□□□ -0.56
USP28-212ENST00000544750 SNRPAP09012 282 aaKnown RBP11.53□□□□□ -0.56
USP28-212ENST00000544750 SBK3P0C264 359 aa11.53□□□□□ -0.56
USP28-212ENST00000544750 CT45A8P0DMV1 189 aa11.53□□□□□ -0.56
USP28-212ENST00000544750 CT45A9P0DMV2 189 aa11.53□□□□□ -0.56
USP28-212ENST00000544750 GRK2P25098 689 aa11.53□□□□□ -0.56
USP28-212ENST00000544750 KCNJ5P48544 419 aa11.53□□□□□ -0.56
USP28-212ENST00000544750 TRMT12Q53H54 448 aaKnown RBP11.53□□□□□ -0.56
USP28-212ENST00000544750 CT45A2Q5DJT8 189 aa11.53□□□□□ -0.56
USP28-212ENST00000544750 OR5M10Q6IEU7 315 aa11.53□□□□□ -0.56
USP28-212ENST00000544750 TIFABQ6ZNK6 161 aa11.53□□□□□ -0.56
USP28-212ENST00000544750 MILR1Q7Z6M3 343 aa11.53□□□□□ -0.56
USP28-212ENST00000544750 MYLK4Q86YV6 388 aaPredicted RBP11.53□□□□□ -0.56
USP28-212ENST00000544750 GBP7Q8N8V2 638 aaPredicted RBP11.53□□□□□ -0.56
USP28-212ENST00000544750 FADS6Q8N9I5 356 aa11.53□□□□□ -0.56
USP28-212ENST00000544750 OR52R1Q8NGF1 315 aa11.53□□□□□ -0.56
USP28-212ENST00000544750 FNDC9Q8TBE3 224 aa11.53□□□□□ -0.56
USP28-212ENST00000544750 ZNF681Q96N22 645 aa11.53□□□□□ -0.56
USP28-212ENST00000544750 SERPINI1Q99574 410 aa11.53□□□□□ -0.56
USP28-212ENST00000544750 REG4Q9BYZ8 158 aa11.53□□□□□ -0.56
USP28-212ENST00000544750 BCAP29Q9UHQ4 241 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms