RNA–Protein interactions for RNA: ENST00000544504.5

YBX3-215, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 583 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-215ENST00000544504 OR1N1Q8NGS0 311 aa8.84□□□□□ -0.99
YBX3-215ENST00000544504 PNPT1Q8TCS8 783 aaKnown RBP8.84□□□□□ -0.99
YBX3-215ENST00000544504 SLC2A12Q8TD20 617 aa8.84□□□□□ -0.99
YBX3-215ENST00000544504 PTPMT1Q8WUK0 201 aaPredicted RBP8.84□□□□□ -0.99
YBX3-215ENST00000544504 NKD1Q969G9 470 aa8.84□□□□□ -0.99
YBX3-215ENST00000544504 NCLNQ969V3 563 aa8.84□□□□□ -0.99
YBX3-215ENST00000544504 UTP4Q969X6 686 aaKnown RBP8.84□□□□□ -0.99
YBX3-215ENST00000544504 VMP1Q96GC9 406 aa8.84□□□□□ -0.99
YBX3-215ENST00000544504 CLPTM1LQ96KA5 538 aa8.84□□□□□ -0.99
YBX3-215ENST00000544504 LMF2Q9BU23 707 aaKnown RBP8.84□□□□□ -0.99
YBX3-215ENST00000544504 SPATA5L1Q9BVQ7 753 aa8.84□□□□□ -0.99
YBX3-215ENST00000544504 OR8D2Q9GZM6 311 aa8.84□□□□□ -0.99
YBX3-215ENST00000544504 ZNF700Q9H0M5 742 aa8.84□□□□□ -0.99
YBX3-215ENST00000544504 OR10A5Q9H207 317 aa8.84□□□□□ -0.99
YBX3-215ENST00000544504 OR51I1Q9H343 314 aa8.84□□□□□ -0.99
YBX3-215ENST00000544504 PIGUQ9H490 435 aa8.84□□□□□ -0.99
YBX3-215ENST00000544504 GORASP2Q9H8Y8 452 aa8.84□□□□□ -0.99
YBX3-215ENST00000544504 EQTNQ9NQ60 294 aa8.84□□□□□ -0.99
YBX3-215ENST00000544504 POLE3Q9NRF9 147 aa8.84□□□□□ -0.99
YBX3-215ENST00000544504 MRTO4Q9UKD2 239 aaKnown RBP8.84□□□□□ -0.99
YBX3-215ENST00000544504 ABCA12Q86UK0 2595 aa8.84□□□□□ -0.99
YBX3-215ENST00000544504 NUP214P35658 2090 aaPredicted RBP8.84□□□□□ -0.99
YBX3-215ENST00000544504 GIMAP1-GIMAP5A0A087WTJ2 511 aa8.83□□□□□ -1
YBX3-215ENST00000544504 MYOCOSA0A1B0GUC4 107 aa8.83□□□□□ -1
YBX3-215ENST00000544504 OR2W5A6NFC9 320 aa8.83□□□□□ -1
YBX3-215ENST00000544504 AQP12BA6NM10 295 aa8.83□□□□□ -1
YBX3-215ENST00000544504 A8MUA0 341 aa8.83□□□□□ -1
YBX3-215ENST00000544504 HMGN4O00479 90 aa8.83□□□□□ -1
YBX3-215ENST00000544504 CXCR6O00574 342 aa8.83□□□□□ -1
YBX3-215ENST00000544504 PEX12O00623 359 aa8.83□□□□□ -1
YBX3-215ENST00000544504 ARPC2O15144 300 aa8.83□□□□□ -1
YBX3-215ENST00000544504 SERPINB7O75635 380 aa8.83□□□□□ -1
YBX3-215ENST00000544504 NKX2-2O95096 273 aa8.83□□□□□ -1
YBX3-215ENST00000544504 DDAH2O95865 285 aa8.83□□□□□ -1
YBX3-215ENST00000544504 IGKV3-11P04433 115 aa8.83□□□□□ -1
YBX3-215ENST00000544504 UMODP07911 640 aa8.83□□□□□ -1
YBX3-215ENST00000544504 GUSBP08236 651 aa8.83□□□□□ -1
YBX3-215ENST00000544504 CT62P0C5K7 136 aa8.83□□□□□ -1
YBX3-215ENST00000544504 UMPSP11172 480 aa8.83□□□□□ -1
YBX3-215ENST00000544504 GGT1P19440 569 aa8.83□□□□□ -1
YBX3-215ENST00000544504 LCN1P31025 176 aa8.83□□□□□ -1
YBX3-215ENST00000544504 PPICP45877 212 aa8.83□□□□□ -1
YBX3-215ENST00000544504 EMDP50402 254 aa8.83□□□□□ -1
YBX3-215ENST00000544504 CRISP3P54108 245 aa8.83□□□□□ -1
YBX3-215ENST00000544504 PSMD4P55036 377 aaKnown RBP8.83□□□□□ -1
YBX3-215ENST00000544504 SLC37A1P57057 533 aa8.83□□□□□ -1
YBX3-215ENST00000544504 ACTR3P61158 418 aa8.83□□□□□ -1
YBX3-215ENST00000544504 CDK6Q00534 326 aa8.83□□□□□ -1
YBX3-215ENST00000544504 SCARB2Q14108 478 aa8.83□□□□□ -1
YBX3-215ENST00000544504 EXOSC7Q15024 291 aaKnown RBP8.83□□□□□ -1
YBX3-215ENST00000544504 COX20Q5RI15 118 aa8.83□□□□□ -1
YBX3-215ENST00000544504 FAAH2Q6GMR7 532 aa8.83□□□□□ -1
YBX3-215ENST00000544504 GLYATQ6IB77 296 aa8.83□□□□□ -1
YBX3-215ENST00000544504 LCN8Q6JVE9 175 aa8.83□□□□□ -1
YBX3-215ENST00000544504 ZFP1Q6P2D0 407 aa8.83□□□□□ -1
YBX3-215ENST00000544504 LANCL3Q6ZV70 420 aa8.83□□□□□ -1
YBX3-215ENST00000544504 VASH2Q86V25 355 aa8.83□□□□□ -1
YBX3-215ENST00000544504 ATCAYQ86WG3 371 aa8.83□□□□□ -1
YBX3-215ENST00000544504 DTX1Q86Y01 620 aa8.83□□□□□ -1
YBX3-215ENST00000544504 AQP12AQ8IXF9 295 aa8.83□□□□□ -1
YBX3-215ENST00000544504 ZZZ3Q8IYH5 903 aa8.83□□□□□ -1
YBX3-215ENST00000544504 CLEC4FQ8N1N0 589 aa8.83□□□□□ -1
YBX3-215ENST00000544504 HORMAD2Q8N7B1 307 aa8.83□□□□□ -1
YBX3-215ENST00000544504 ZNF615Q8N8J6 731 aa8.83□□□□□ -1
YBX3-215ENST00000544504 COX18Q8N8Q8 333 aa8.83□□□□□ -1
YBX3-215ENST00000544504 FAM13CQ8NE31 585 aa8.83□□□□□ -1
YBX3-215ENST00000544504 OR8K3Q8NH51 312 aa8.83□□□□□ -1
YBX3-215ENST00000544504 XAGE5Q8WWM1 108 aa8.83□□□□□ -1
YBX3-215ENST00000544504 RASSF5Q8WWW0 418 aa8.83□□□□□ -1
YBX3-215ENST00000544504 OIT3Q8WWZ8 545 aa8.83□□□□□ -1
YBX3-215ENST00000544504 SLC9A6Q92581 669 aa8.83□□□□□ -1
YBX3-215ENST00000544504 HOXB13Q92826 284 aaPredicted RBP8.83□□□□□ -1
YBX3-215ENST00000544504 STMN2Q93045 179 aa8.83□□□□□ -1
YBX3-215ENST00000544504 FAM162AQ96A26 154 aa8.83□□□□□ -1
YBX3-215ENST00000544504 GIMAP5Q96F15 307 aa8.83□□□□□ -1
YBX3-215ENST00000544504 NSMCE2Q96MF7 247 aa8.83□□□□□ -1
YBX3-215ENST00000544504 TRNT1Q96Q11 434 aaKnown RBP8.83□□□□□ -1
YBX3-215ENST00000544504 OR7D2Q96RA2 312 aa8.83□□□□□ -1
YBX3-215ENST00000544504 ZNF607Q96SK3 696 aa8.83□□□□□ -1
YBX3-215ENST00000544504 BTBD2Q9BX70 525 aa8.83□□□□□ -1
YBX3-215ENST00000544504 PIF1Q9H611 641 aa8.83□□□□□ -1
YBX3-215ENST00000544504 AKIRIN1Q9H9L7 192 aaPredicted RBP8.83□□□□□ -1
YBX3-215ENST00000544504 GPN2Q9H9Y4 310 aaPredicted RBP8.83□□□□□ -1
YBX3-215ENST00000544504 FOLH1BQ9HBA9 442 aa8.83□□□□□ -1
YBX3-215ENST00000544504 Q9N2J8 555 aa8.83□□□□□ -1
YBX3-215ENST00000544504 RPS6KA6Q9UK32 745 aa8.83□□□□□ -1
YBX3-215ENST00000544504 SCN2AQ99250 2005 aa8.82□□□□□ -1
YBX3-215ENST00000544504 NSG1A0A0A6YYJ2 146 aa8.82□□□□□ -1
YBX3-215ENST00000544504 A0A0G2JPF8 293 aa8.82□□□□□ -1
YBX3-215ENST00000544504 HNRNPCL2B2RXH8 293 aa8.82□□□□□ -1
YBX3-215ENST00000544504 HNRNPCL3B7ZW38 293 aa8.82□□□□□ -1
YBX3-215ENST00000544504 ANKRD65E5RJM6 399 aa8.82□□□□□ -1
YBX3-215ENST00000544504 ACOT8O14734 319 aa8.82□□□□□ -1
YBX3-215ENST00000544504 ACOX3O15254 700 aa8.82□□□□□ -1
YBX3-215ENST00000544504 CREG1O75629 220 aa8.82□□□□□ -1
YBX3-215ENST00000544504 HPP00738 406 aa8.82□□□□□ -1
YBX3-215ENST00000544504 TFPTP0C1Z6 253 aa8.82□□□□□ -1
YBX3-215ENST00000544504 HNRNPCL4P0DMR1 293 aa8.82□□□□□ -1
YBX3-215ENST00000544504 OR12D1P0DN82 309 aa8.82□□□□□ -1
YBX3-215ENST00000544504 WT1P19544 449 aaPredicted RBP8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms