RNA–Protein interactions for RNA: ENST00000544223.6

HCFC2-202, Transcript of host cell factor C2, humanhuman

TSL 2

Gene HCFC2, Length 2,538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-202ENST00000544223 CRHBPP24387 322 aa12.73□□□□□ -0.37
HCFC2-202ENST00000544223 TRIM61Q5EBN2 209 aa12.73□□□□□ -0.37
HCFC2-202ENST00000544223 DCST2Q5T1A1 773 aa12.73□□□□□ -0.37
HCFC2-202ENST00000544223 PODNL1Q6PEZ8 512 aa12.73□□□□□ -0.37
HCFC2-202ENST00000544223 KCTD8Q6ZWB6 473 aa12.73□□□□□ -0.37
HCFC2-202ENST00000544223 B3GNT8Q7Z7M8 397 aa12.73□□□□□ -0.37
HCFC2-202ENST00000544223 PLXDC1Q8IUK5 500 aa12.73□□□□□ -0.37
HCFC2-202ENST00000544223 GALNT12Q8IXK2 581 aa12.73□□□□□ -0.37
HCFC2-202ENST00000544223 BBS10Q8TAM1 723 aa12.73□□□□□ -0.37
HCFC2-202ENST00000544223 PTCHD1Q96NR3 888 aa12.73□□□□□ -0.37
HCFC2-202ENST00000544223 CCDC90BQ9GZT6 254 aa12.73□□□□□ -0.37
HCFC2-202ENST00000544223 C11orf16Q9NQ32 467 aa12.73□□□□□ -0.37
HCFC2-202ENST00000544223 FGF21Q9NSA1 209 aa12.73□□□□□ -0.37
HCFC2-202ENST00000544223 PCDHGA6Q9Y5G7 932 aa12.73□□□□□ -0.37
HCFC2-202ENST00000544223 HEMK1Q9Y5R4 338 aaPredicted RBP12.73□□□□□ -0.37
HCFC2-202ENST00000544223 A0A0G2JPF8 293 aa12.72□□□□□ -0.37
HCFC2-202ENST00000544223 A0A1B0GTQ1 180 aa12.72□□□□□ -0.37
HCFC2-202ENST00000544223 HNRNPCL2B2RXH8 293 aa12.72□□□□□ -0.37
HCFC2-202ENST00000544223 HNRNPCL3B7ZW38 293 aa12.72□□□□□ -0.37
HCFC2-202ENST00000544223 PDE9AO76083 593 aa12.72□□□□□ -0.37
HCFC2-202ENST00000544223 THY1P04216 161 aa12.72□□□□□ -0.37
HCFC2-202ENST00000544223 HNRNPCL4P0DMR1 293 aa12.72□□□□□ -0.37
HCFC2-202ENST00000544223 ST13P50502 369 aaKnown RBP12.72□□□□□ -0.37
HCFC2-202ENST00000544223 PSG6Q00889 435 aa12.72□□□□□ -0.37
HCFC2-202ENST00000544223 MVKQ03426 396 aa12.72□□□□□ -0.37
HCFC2-202ENST00000544223 NDUFAF6Q330K2 333 aa12.72□□□□□ -0.37
HCFC2-202ENST00000544223 CNPY1Q3B7I2 92 aa12.72□□□□□ -0.37
HCFC2-202ENST00000544223 COLEC12Q5KU26 742 aa12.72□□□□□ -0.37
HCFC2-202ENST00000544223 ZNF770Q6IQ21 691 aaPredicted RBP12.72□□□□□ -0.37
HCFC2-202ENST00000544223 ZNF836Q6ZNA1 936 aa12.72□□□□□ -0.37
HCFC2-202ENST00000544223 KANSL1Q7Z3B3 1105 aa12.72□□□□□ -0.37
HCFC2-202ENST00000544223 BCDIN3DQ7Z5W3 292 aaKnown RBP12.72□□□□□ -0.37
HCFC2-202ENST00000544223 WDR5BQ86VZ2 330 aa12.72□□□□□ -0.37
HCFC2-202ENST00000544223 IQCF1Q8N6M8 205 aa12.72□□□□□ -0.37
HCFC2-202ENST00000544223 RNF217Q8TC41 542 aa12.72□□□□□ -0.37
HCFC2-202ENST00000544223 MOAP1Q96BY2 351 aa12.72□□□□□ -0.37
HCFC2-202ENST00000544223 CTHRC1Q96CG8 243 aa12.72□□□□□ -0.37
HCFC2-202ENST00000544223 TRNT1Q96Q11 434 aaKnown RBP12.72□□□□□ -0.37
HCFC2-202ENST00000544223 CTRCQ99895 268 aa12.72□□□□□ -0.37
HCFC2-202ENST00000544223 NAA50Q9GZZ1 169 aaKnown RBP12.72□□□□□ -0.37
HCFC2-202ENST00000544223 BCL2L10Q9HD36 194 aa12.72□□□□□ -0.37
HCFC2-202ENST00000544223 APMAPQ9HDC9 416 aa12.72□□□□□ -0.37
HCFC2-202ENST00000544223 SEMA4GQ9NTN9 838 aa12.72□□□□□ -0.37
HCFC2-202ENST00000544223 PTGFRNQ9P2B2 879 aa12.72□□□□□ -0.37
HCFC2-202ENST00000544223 IL20RAQ9UHF4 553 aa12.72□□□□□ -0.37
HCFC2-202ENST00000544223 CDC14CA4D256 554 aa12.72□□□□□ -0.37
HCFC2-202ENST00000544223 SLC16A6O15403 523 aa12.72□□□□□ -0.37
HCFC2-202ENST00000544223 UGT2B17O75795 530 aa12.72□□□□□ -0.37
HCFC2-202ENST00000544223 H1F0P07305 194 aaKnown RBP12.72□□□□□ -0.37
HCFC2-202ENST00000544223 SLC35E2P0CK97 266 aa12.72□□□□□ -0.37
HCFC2-202ENST00000544223 TNNI3P19429 210 aa12.72□□□□□ -0.37
HCFC2-202ENST00000544223 EMDP50402 254 aa12.72□□□□□ -0.37
HCFC2-202ENST00000544223 MAP4K2Q12851 820 aa12.72□□□□□ -0.37
HCFC2-202ENST00000544223 TARDBPQ13148 414 aaKnown RBP eCLIP12.72□□□□□ -0.37
HCFC2-202ENST00000544223 FAM53BQ14153 422 aa12.72□□□□□ -0.37
HCFC2-202ENST00000544223 NDUFA9Q16795 377 aa12.72□□□□□ -0.37
HCFC2-202ENST00000544223 HEPHL1Q6MZM0 1159 aa12.72□□□□□ -0.37
HCFC2-202ENST00000544223 CCDC103Q8IW40 242 aa12.72□□□□□ -0.37
HCFC2-202ENST00000544223 SLC30A8Q8IWU4 369 aa12.72□□□□□ -0.37
HCFC2-202ENST00000544223 ENTHD1Q8IYW4 607 aa12.72□□□□□ -0.37
HCFC2-202ENST00000544223 FAM81AQ8TBF8 368 aa12.72□□□□□ -0.37
HCFC2-202ENST00000544223 APH1BQ8WW43 257 aa12.72□□□□□ -0.37
HCFC2-202ENST00000544223 ZNF285Q96NJ3 590 aa12.72□□□□□ -0.37
HCFC2-202ENST00000544223 NRSN2Q9GZP1 204 aa12.72□□□□□ -0.37
HCFC2-202ENST00000544223 ERVMER34-1Q9H9K5 563 aa12.72□□□□□ -0.37
HCFC2-202ENST00000544223 POLR1BQ9H9Y6 1135 aa12.72□□□□□ -0.37
HCFC2-202ENST00000544223 CTSFQ9UBX1 484 aa12.72□□□□□ -0.37
HCFC2-202ENST00000544223 KCND3Q9UK17 655 aa12.72□□□□□ -0.37
HCFC2-202ENST00000544223 NDRG4Q9ULP0 352 aaKnown RBP12.72□□□□□ -0.37
HCFC2-202ENST00000544223 HEATR5AQ86XA9 2040 aa12.72□□□□□ -0.37
HCFC2-202ENST00000544223 DSPPQ9NZW4 1301 aa12.72□□□□□ -0.37
HCFC2-202ENST00000544223 PRRC2CQ9Y520 2896 aaKnown RBP12.72□□□□□ -0.37
HCFC2-202ENST00000544223 IGHV3-20A0A0C4DH32 117 aa12.71□□□□□ -0.37
HCFC2-202ENST00000544223 C17orf51A8MQB3 221 aa12.71□□□□□ -0.37
HCFC2-202ENST00000544223 SLC1A7O00341 560 aa12.71□□□□□ -0.37
HCFC2-202ENST00000544223 PLOD3O60568 738 aa12.71□□□□□ -0.37
HCFC2-202ENST00000544223 ADAM11O75078 769 aa12.71□□□□□ -0.37
HCFC2-202ENST00000544223 ALOX5P09917 674 aa12.71□□□□□ -0.37
HCFC2-202ENST00000544223 NR4A1P22736 598 aa12.71□□□□□ -0.37
HCFC2-202ENST00000544223 PLAURQ03405 335 aa12.71□□□□□ -0.37
HCFC2-202ENST00000544223 CCDC157Q569K6 752 aa12.71□□□□□ -0.37
HCFC2-202ENST00000544223 NPSR1Q6W5P4 371 aa12.71□□□□□ -0.37
HCFC2-202ENST00000544223 P3H2Q8IVL5 708 aa12.71□□□□□ -0.37
HCFC2-202ENST00000544223 NKAIN4Q8IVV8 208 aa12.71□□□□□ -0.37
HCFC2-202ENST00000544223 FNDC11Q9BVV2 318 aa12.71□□□□□ -0.37
HCFC2-202ENST00000544223 SELENONQ9NZV5 590 aa12.71□□□□□ -0.37
HCFC2-202ENST00000544223 CNIH4Q9P003 139 aa12.71□□□□□ -0.37
HCFC2-202ENST00000544223 NTMQ9P121 344 aa12.71□□□□□ -0.37
HCFC2-202ENST00000544223 EPHA6Q9UF33 1036 aa12.71□□□□□ -0.37
HCFC2-202ENST00000544223 RNF6Q9Y252 685 aa12.71□□□□□ -0.37
HCFC2-202ENST00000544223 HCN4Q9Y3Q4 1203 aa12.71□□□□□ -0.37
HCFC2-202ENST00000544223 ADAMTS20P59510 1910 aa12.71□□□□□ -0.37
HCFC2-202ENST00000544223 GMFGO60234 142 aa12.71□□□□□ -0.37
HCFC2-202ENST00000544223 CTNSO60931 367 aa12.71□□□□□ -0.37
HCFC2-202ENST00000544223 WBP4O75554 376 aaKnown RBP12.71□□□□□ -0.37
HCFC2-202ENST00000544223 ANGPTL1O95841 491 aa12.71□□□□□ -0.37
HCFC2-202ENST00000544223 ITGAMP11215 1152 aa12.71□□□□□ -0.37
HCFC2-202ENST00000544223 FUT1P19526 365 aa12.71□□□□□ -0.37
HCFC2-202ENST00000544223 CBLP22681 906 aa12.71□□□□□ -0.37
HCFC2-202ENST00000544223 MAP2K4P45985 399 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms