RNA–Protein interactions for RNA: ENST00000544052.6

SCFD1-207, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-207ENST00000544052 ZNF177Q13360 481 aaPredicted RBP3.12□□□□□ -1.91
SCFD1-207ENST00000544052 MLF2Q15773 248 aaPredicted RBP3.12□□□□□ -1.91
SCFD1-207ENST00000544052 WLSQ5T9L3 541 aa3.12□□□□□ -1.91
SCFD1-207ENST00000544052 TBC1D10CQ8IV04 446 aa3.12□□□□□ -1.91
SCFD1-207ENST00000544052 LMNTD2Q8IXW0 634 aa3.12□□□□□ -1.91
SCFD1-207ENST00000544052 AQP11Q8NBQ7 271 aa3.12□□□□□ -1.91
SCFD1-207ENST00000544052 GOLGA5Q8TBA6 731 aa3.12□□□□□ -1.91
SCFD1-207ENST00000544052 TCP11Q8WWU5 503 aa3.12□□□□□ -1.91
SCFD1-207ENST00000544052 PNPLA2Q96AD5 504 aa3.12□□□□□ -1.91
SCFD1-207ENST00000544052 TNFRSF13CQ96RJ3 184 aa3.12□□□□□ -1.91
SCFD1-207ENST00000544052 KRT12Q99456 494 aa3.12□□□□□ -1.91
SCFD1-207ENST00000544052 WDR41Q9HAD4 459 aa3.12□□□□□ -1.91
SCFD1-207ENST00000544052 CD209Q9NNX6 404 aa3.12□□□□□ -1.91
SCFD1-207ENST00000544052 SLC35D1Q9NTN3 355 aa3.12□□□□□ -1.91
SCFD1-207ENST00000544052 THAP10Q9P2Z0 257 aaPredicted RBP3.12□□□□□ -1.91
SCFD1-207ENST00000544052 IGHV3-38A0A0C4DH36 116 aa3.11□□□□□ -1.91
SCFD1-207ENST00000544052 MEX3AA1L020 520 aaKnown RBP3.11□□□□□ -1.91
SCFD1-207ENST00000544052 MEI4A8MW99 385 aa3.11□□□□□ -1.91
SCFD1-207ENST00000544052 INPP4BO15327 924 aa3.11□□□□□ -1.91
SCFD1-207ENST00000544052 CHADO15335 359 aa3.11□□□□□ -1.91
SCFD1-207ENST00000544052 PEX11AO75192 247 aa3.11□□□□□ -1.91
SCFD1-207ENST00000544052 DUSP11O75319 330 aaKnown RBP3.11□□□□□ -1.91
SCFD1-207ENST00000544052 MTRF1O75570 445 aaKnown RBP3.11□□□□□ -1.91
SCFD1-207ENST00000544052 PAICSP22234 425 aaKnown RBP3.11□□□□□ -1.91
SCFD1-207ENST00000544052 KIF5BP33176 963 aa3.11□□□□□ -1.91
SCFD1-207ENST00000544052 MDH1P40925 334 aaKnown RBP3.11□□□□□ -1.91
SCFD1-207ENST00000544052 ZFP36L2P47974 494 aaKnown RBP3.11□□□□□ -1.91
SCFD1-207ENST00000544052 TRPC1P48995 793 aa3.11□□□□□ -1.91
SCFD1-207ENST00000544052 NDST2P52849 883 aa3.11□□□□□ -1.91
SCFD1-207ENST00000544052 CYCSP99999 105 aaKnown RBP3.11□□□□□ -1.91
SCFD1-207ENST00000544052 TMEM30BQ3MIR4 351 aa3.11□□□□□ -1.91
SCFD1-207ENST00000544052 TEX35Q5T0J7 233 aa3.11□□□□□ -1.91
SCFD1-207ENST00000544052 BSPRYQ5W0U4 402 aa3.11□□□□□ -1.91
SCFD1-207ENST00000544052 LCLAT1Q6UWP7 414 aa3.11□□□□□ -1.91
SCFD1-207ENST00000544052 ZNF397Q8NF99 534 aaPredicted RBP3.11□□□□□ -1.91
SCFD1-207ENST00000544052 DNASE2BQ8WZ79 361 aa3.11□□□□□ -1.91
SCFD1-207ENST00000544052 DCPSQ96C86 337 aaKnown RBP3.11□□□□□ -1.91
SCFD1-207ENST00000544052 DCTN5Q9BTE1 182 aa3.11□□□□□ -1.91
SCFD1-207ENST00000544052 KRTAP1-5Q9BYS1 174 aa3.11□□□□□ -1.91
SCFD1-207ENST00000544052 COA1Q9GZY4 146 aa3.11□□□□□ -1.91
SCFD1-207ENST00000544052 MED20Q9H944 212 aa3.11□□□□□ -1.91
SCFD1-207ENST00000544052 WIPI2Q9Y4P8 454 aa3.11□□□□□ -1.91
SCFD1-207ENST00000544052 FRMPD3Q5JV73 1810 aa3.11□□□□□ -1.91
SCFD1-207ENST00000544052 FER1L5A0AVI2 2057 aa3.11□□□□□ -1.91
SCFD1-207ENST00000544052 LOC285556D6RIA3 1793 aa3.11□□□□□ -1.91
SCFD1-207ENST00000544052 MAST2Q6P0Q8 1798 aa3.11□□□□□ -1.91
SCFD1-207ENST00000544052 TRBV5-4A0A0C4DH59 114 aa3.1□□□□□ -1.91
SCFD1-207ENST00000544052 A0A0U1RQV5 110 aa3.1□□□□□ -1.91
SCFD1-207ENST00000544052 CLRN2A0PK11 232 aa3.1□□□□□ -1.91
SCFD1-207ENST00000544052 MPTX1A8MV57 137 aa3.1□□□□□ -1.91
SCFD1-207ENST00000544052 H3BMH7 237 aa3.1□□□□□ -1.91
SCFD1-207ENST00000544052 LGALS8O00214 317 aa3.1□□□□□ -1.91
SCFD1-207ENST00000544052 NDC80O14777 642 aa3.1□□□□□ -1.91
SCFD1-207ENST00000544052 ARPC1BO15143 372 aaKnown RBP3.1□□□□□ -1.91
SCFD1-207ENST00000544052 ZG16O60844 167 aa3.1□□□□□ -1.91
SCFD1-207ENST00000544052 FCER2P06734 321 aa3.1□□□□□ -1.91
SCFD1-207ENST00000544052 MAT2AP31153 395 aaKnown RBP3.1□□□□□ -1.91
SCFD1-207ENST00000544052 ACAA2P42765 397 aaKnown RBP3.1□□□□□ -1.91
SCFD1-207ENST00000544052 MAGEA4P43358 317 aa3.1□□□□□ -1.91
SCFD1-207ENST00000544052 GYG1P46976 350 aa3.1□□□□□ -1.91
SCFD1-207ENST00000544052 NAAAQ02083 359 aa3.1□□□□□ -1.91
SCFD1-207ENST00000544052 PDZK1IP1Q13113 114 aa3.1□□□□□ -1.91
SCFD1-207ENST00000544052 SCGB2A2Q13296 93 aa3.1□□□□□ -1.91
SCFD1-207ENST00000544052 KIAA0141Q14154 515 aaPredicted RBP3.1□□□□□ -1.91
SCFD1-207ENST00000544052 NECTIN1Q15223 517 aa3.1□□□□□ -1.91
SCFD1-207ENST00000544052 HKDC1Q2TB90 917 aa3.1□□□□□ -1.91
SCFD1-207ENST00000544052 AFTPHQ6ULP2 937 aa3.1□□□□□ -1.91
SCFD1-207ENST00000544052 C3P1Q6ZMU1 363 aa3.1□□□□□ -1.91
SCFD1-207ENST00000544052 ASRGL1Q7L266 308 aa3.1□□□□□ -1.91
SCFD1-207ENST00000544052 ARL6IP6Q8N6S5 226 aa3.1□□□□□ -1.91
SCFD1-207ENST00000544052 GVQW1Q8N7I0 195 aa3.1□□□□□ -1.91
SCFD1-207ENST00000544052 BCORP1Q8N888 145 aa3.1□□□□□ -1.91
SCFD1-207ENST00000544052 OR10G7Q8NGN6 311 aa3.1□□□□□ -1.91
SCFD1-207ENST00000544052 OR4F5Q8NH21 305 aa3.1□□□□□ -1.91
SCFD1-207ENST00000544052 RDH11Q8TC12 318 aa3.1□□□□□ -1.91
SCFD1-207ENST00000544052 NCLNQ969V3 563 aa3.1□□□□□ -1.91
SCFD1-207ENST00000544052 ART5Q96L15 291 aa3.1□□□□□ -1.91
SCFD1-207ENST00000544052 ALKBH3Q96Q83 286 aaPredicted RBP3.1□□□□□ -1.91
SCFD1-207ENST00000544052 CARD6Q9BX69 1037 aa3.1□□□□□ -1.91
SCFD1-207ENST00000544052 FAM124BQ9H5Z6 455 aaPredicted RBP3.1□□□□□ -1.91
SCFD1-207ENST00000544052 DCTPP1Q9H773 170 aa3.1□□□□□ -1.91
SCFD1-207ENST00000544052 VAT1LQ9HCJ6 419 aa3.1□□□□□ -1.91
SCFD1-207ENST00000544052 WWOXQ9NZC7 414 aa3.1□□□□□ -1.91
SCFD1-207ENST00000544052 P2RX2Q9UBL9 471 aa3.1□□□□□ -1.91
SCFD1-207ENST00000544052 IKZF3Q9UKT9 509 aa3.1□□□□□ -1.91
SCFD1-207ENST00000544052 MGAT4BQ9UQ53 548 aa3.1□□□□□ -1.91
SCFD1-207ENST00000544052 DDX60LQ5H9U9 1706 aaKnown RBP3.1□□□□□ -1.91
SCFD1-207ENST00000544052 SZT2Q5T011 3432 aa3.1□□□□□ -1.91
SCFD1-207ENST00000544052 FAM230AA0A1W2PPH8 454 aa3.1□□□□□ -1.91
SCFD1-207ENST00000544052 TSPAN2O60636 221 aa3.1□□□□□ -1.91
SCFD1-207ENST00000544052 VPS26AO75436 327 aa3.1□□□□□ -1.91
SCFD1-207ENST00000544052 TOM1L1O75674 476 aa3.1□□□□□ -1.91
SCFD1-207ENST00000544052 CA3P07451 260 aa3.1□□□□□ -1.91
SCFD1-207ENST00000544052 FCGR2BP31994 310 aaPredicted RBP3.1□□□□□ -1.91
SCFD1-207ENST00000544052 FCGR2CP31995 323 aa3.1□□□□□ -1.91
SCFD1-207ENST00000544052 RAPSNQ13702 412 aa3.1□□□□□ -1.91
SCFD1-207ENST00000544052 ZSWIM7Q19AV6 140 aa3.1□□□□□ -1.91
SCFD1-207ENST00000544052 ECSCRQ19T08 205 aa3.1□□□□□ -1.91
SCFD1-207ENST00000544052 ZNF699Q32M78 642 aa3.1□□□□□ -1.91
SCFD1-207ENST00000544052 RABL6Q3YEC7 729 aaPredicted RBP3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms