RNA–Protein interactions for RNA: ENST00000543048.5

TNFRSF1A-214, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-214ENST00000543048 TSPAN2O60636 221 aa8.9□□□□□ -0.98
TNFRSF1A-214ENST00000543048 COQ9O75208 318 aa8.9□□□□□ -0.98
TNFRSF1A-214ENST00000543048 UGT2B11O75310 529 aa8.9□□□□□ -0.98
TNFRSF1A-214ENST00000543048 NME6O75414 186 aaPredicted RBP8.9□□□□□ -0.98
TNFRSF1A-214ENST00000543048 HPNP05981 417 aa8.9□□□□□ -0.98
TNFRSF1A-214ENST00000543048 IFI6P09912 130 aa8.9□□□□□ -0.98
TNFRSF1A-214ENST00000543048 BCKDHAP12694 445 aa8.9□□□□□ -0.98
TNFRSF1A-214ENST00000543048 DDX5P17844 614 aaKnown RBP8.9□□□□□ -0.98
TNFRSF1A-214ENST00000543048 SDC1P18827 310 aa8.9□□□□□ -0.98
TNFRSF1A-214ENST00000543048 ACVR2AP27037 513 aa8.9□□□□□ -0.98
TNFRSF1A-214ENST00000543048 GDF1P27539 372 aa8.9□□□□□ -0.98
TNFRSF1A-214ENST00000543048 ARRB2P32121 409 aa8.9□□□□□ -0.98
TNFRSF1A-214ENST00000543048 KRT20P35900 424 aa8.9□□□□□ -0.98
TNFRSF1A-214ENST00000543048 SERPINB4P48594 390 aa8.9□□□□□ -0.98
TNFRSF1A-214ENST00000543048 PNLIPRP2P54317 469 aa8.9□□□□□ -0.98
TNFRSF1A-214ENST00000543048 CORO7P57737 925 aa8.9□□□□□ -0.98
TNFRSF1A-214ENST00000543048 RPL38P63173 70 aaKnown RBP8.9□□□□□ -0.98
TNFRSF1A-214ENST00000543048 MRPS22P82650 360 aaKnown RBP8.9□□□□□ -0.98
TNFRSF1A-214ENST00000543048 PMPCAQ10713 525 aa8.9□□□□□ -0.98
TNFRSF1A-214ENST00000543048 EFR3AQ14156 821 aa8.9□□□□□ -0.98
TNFRSF1A-214ENST00000543048 WLSQ5T9L3 541 aa8.9□□□□□ -0.98
TNFRSF1A-214ENST00000543048 FNDC7Q5VTL7 733 aa8.9□□□□□ -0.98
TNFRSF1A-214ENST00000543048 TIGD3Q6B0B8 471 aa8.9□□□□□ -0.98
TNFRSF1A-214ENST00000543048 TMEM107Q6UX40 140 aa8.9□□□□□ -0.98
TNFRSF1A-214ENST00000543048 NCCRP1Q6ZVX7 275 aaPredicted RBP8.9□□□□□ -0.98
TNFRSF1A-214ENST00000543048 LARP4Q71RC2 724 aaKnown RBP eCLIP8.9□□□□□ -0.98
TNFRSF1A-214ENST00000543048 VASH1Q7L8A9 365 aaPredicted RBP8.9□□□□□ -0.98
TNFRSF1A-214ENST00000543048 R3HCC1LQ7Z5L2 792 aaKnown RBP8.9□□□□□ -0.98
TNFRSF1A-214ENST00000543048 SLC44A2Q8IWA5 706 aaPredicted RBP8.9□□□□□ -0.98
TNFRSF1A-214ENST00000543048 LIX1Q8N485 282 aa8.9□□□□□ -0.98
TNFRSF1A-214ENST00000543048 ARFGAP2Q8N6H7 521 aa8.9□□□□□ -0.98
TNFRSF1A-214ENST00000543048 OR1J4Q8NGS1 313 aa8.9□□□□□ -0.98
TNFRSF1A-214ENST00000543048 NEIL3Q8TAT5 605 aa8.9□□□□□ -0.98
TNFRSF1A-214ENST00000543048 AGR3Q8TD06 166 aa8.9□□□□□ -0.98
TNFRSF1A-214ENST00000543048 ASB5Q8WWX0 329 aa8.9□□□□□ -0.98
TNFRSF1A-214ENST00000543048 RND1Q92730 232 aa8.9□□□□□ -0.98
TNFRSF1A-214ENST00000543048 MTERF3Q96E29 417 aa8.9□□□□□ -0.98
TNFRSF1A-214ENST00000543048 SLC35A4Q96G79 324 aa8.9□□□□□ -0.98
TNFRSF1A-214ENST00000543048 ZNF764Q96H86 408 aaPredicted RBP8.9□□□□□ -0.98
TNFRSF1A-214ENST00000543048 TSSK3Q96PN8 268 aa8.9□□□□□ -0.98
TNFRSF1A-214ENST00000543048 ADOQ96SZ5 270 aa8.9□□□□□ -0.98
TNFRSF1A-214ENST00000543048 KCNK9Q9NPC2 374 aa8.9□□□□□ -0.98
TNFRSF1A-214ENST00000543048 ALKBH4Q9NXW9 302 aa8.9□□□□□ -0.98
TNFRSF1A-214ENST00000543048 SH3BP4Q9P0V3 963 aa8.9□□□□□ -0.98
TNFRSF1A-214ENST00000543048 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.9□□□□□ -0.98
TNFRSF1A-214ENST00000543048 OR10H1Q9Y4A9 318 aa8.9□□□□□ -0.98
TNFRSF1A-214ENST00000543048 PCDHGB3Q9Y5G1 929 aa8.9□□□□□ -0.98
TNFRSF1A-214ENST00000543048 APCP25054 2843 aa8.9□□□□□ -0.99
TNFRSF1A-214ENST00000543048 DCHS2Q6V1P9 2916 aa8.89□□□□□ -0.99
TNFRSF1A-214ENST00000543048 CREBBPQ92793 2442 aa8.89□□□□□ -0.99
TNFRSF1A-214ENST00000543048 TTC36A6NLP5 189 aa8.89□□□□□ -0.99
TNFRSF1A-214ENST00000543048 FIGNL2A6NMB9 653 aa8.89□□□□□ -0.99
TNFRSF1A-214ENST00000543048 AHRRA9YTQ3 701 aa8.89□□□□□ -0.99
TNFRSF1A-214ENST00000543048 TMEM114B3SHH9 223 aa8.89□□□□□ -0.99
TNFRSF1A-214ENST00000543048 UPK1AO00322 258 aa8.89□□□□□ -0.99
TNFRSF1A-214ENST00000543048 GNB5O14775 395 aa8.89□□□□□ -0.99
TNFRSF1A-214ENST00000543048 PDPK1O15530 556 aa8.89□□□□□ -0.99
TNFRSF1A-214ENST00000543048 WDR1O75083 606 aa8.89□□□□□ -0.99
TNFRSF1A-214ENST00000543048 PEX11AO75192 247 aa8.89□□□□□ -0.99
TNFRSF1A-214ENST00000543048 CBR3O75828 277 aa8.89□□□□□ -0.99
TNFRSF1A-214ENST00000543048 SNUPNO95149 360 aaKnown RBP8.89□□□□□ -0.99
TNFRSF1A-214ENST00000543048 ZWINTO95229 277 aa8.89□□□□□ -0.99
TNFRSF1A-214ENST00000543048 SERPINE1P05121 402 aa8.89□□□□□ -0.99
TNFRSF1A-214ENST00000543048 GABRA1P14867 456 aa8.89□□□□□ -0.99
TNFRSF1A-214ENST00000543048 ELAVL4P26378 380 aaKnown RBP8.89□□□□□ -0.99
TNFRSF1A-214ENST00000543048 MAPK1P28482 360 aa8.89□□□□□ -0.99
TNFRSF1A-214ENST00000543048 GRNP28799 593 aaKnown RBP8.89□□□□□ -0.99
TNFRSF1A-214ENST00000543048 IL12BP29460 328 aa8.89□□□□□ -0.99
TNFRSF1A-214ENST00000543048 GPC1P35052 558 aa8.89□□□□□ -0.99
TNFRSF1A-214ENST00000543048 PTGDSP41222 190 aa8.89□□□□□ -0.99
TNFRSF1A-214ENST00000543048 MC3RP41968 323 aa8.89□□□□□ -0.99
TNFRSF1A-214ENST00000543048 TRPC1P48995 793 aa8.89□□□□□ -0.99
TNFRSF1A-214ENST00000543048 CDK9P50750 372 aaKnown RBP8.89□□□□□ -0.99
TNFRSF1A-214ENST00000543048 MANFP55145 182 aaKnown RBP8.89□□□□□ -0.99
TNFRSF1A-214ENST00000543048 NUP107P57740 925 aa8.89□□□□□ -0.99
TNFRSF1A-214ENST00000543048 ABCE1P61221 599 aaKnown RBP8.89□□□□□ -0.99
TNFRSF1A-214ENST00000543048 PPP2R2AP63151 447 aa8.89□□□□□ -0.99
TNFRSF1A-214ENST00000543048 GAB1Q13480 694 aa8.89□□□□□ -0.99
TNFRSF1A-214ENST00000543048 TOMM20Q15388 145 aa8.89□□□□□ -0.99
TNFRSF1A-214ENST00000543048 CDSNQ15517 529 aa8.89□□□□□ -0.99
TNFRSF1A-214ENST00000543048 ZNHIT3Q15649 155 aaPredicted RBP8.89□□□□□ -0.99
TNFRSF1A-214ENST00000543048 CYP27C1Q4G0S4 372 aa8.89□□□□□ -0.99
TNFRSF1A-214ENST00000543048 ATP6AP1LQ52LC2 224 aa8.89□□□□□ -0.99
TNFRSF1A-214ENST00000543048 XKR7Q5GH72 579 aa8.89□□□□□ -0.99
TNFRSF1A-214ENST00000543048 C6orf136Q5SQH8 315 aa8.89□□□□□ -0.99
TNFRSF1A-214ENST00000543048 ANKRD26P1Q6NSI1 321 aa8.89□□□□□ -0.99
TNFRSF1A-214ENST00000543048 ANGPTL8Q6UXH0 198 aa8.89□□□□□ -0.99
TNFRSF1A-214ENST00000543048 NPSR1Q6W5P4 371 aa8.89□□□□□ -0.99
TNFRSF1A-214ENST00000543048 ZNF551Q7Z340 670 aaPredicted RBP8.89□□□□□ -0.99
TNFRSF1A-214ENST00000543048 OR2L13Q8N349 312 aa8.89□□□□□ -0.99
TNFRSF1A-214ENST00000543048 MARVELD2Q8N4S9 558 aa8.89□□□□□ -0.99
TNFRSF1A-214ENST00000543048 OR4N2Q8NGD1 307 aa8.89□□□□□ -0.99
TNFRSF1A-214ENST00000543048 LILRB4Q8NHJ6 448 aa8.89□□□□□ -0.99
TNFRSF1A-214ENST00000543048 CEP70Q8NHQ1 597 aa8.89□□□□□ -0.99
TNFRSF1A-214ENST00000543048 ZFP28Q8NHY6 868 aa8.89□□□□□ -0.99
TNFRSF1A-214ENST00000543048 CA5BP1Q8WTZ4 195 aa8.89□□□□□ -0.99
TNFRSF1A-214ENST00000543048 SDCCAG3Q96C92 435 aa8.89□□□□□ -0.99
TNFRSF1A-214ENST00000543048 PPCDCQ96CD2 204 aa8.89□□□□□ -0.99
TNFRSF1A-214ENST00000543048 C3orf30Q96M34 536 aa8.89□□□□□ -0.99
TNFRSF1A-214ENST00000543048 OSBPL11Q9BXB4 747 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms