RNA–Protein interactions for RNA: ENST00000542557.5

PTPRO-208, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRO, Length 2,946 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-208ENST00000542557 SOX3P41225 446 aa6.13□□□□□ -1.43
PTPRO-208ENST00000542557 OMPP47874 163 aa6.13□□□□□ -1.43
PTPRO-208ENST00000542557 SOX9P48436 509 aa6.13□□□□□ -1.43
PTPRO-208ENST00000542557 PPP2CBP62714 309 aa6.13□□□□□ -1.43
PTPRO-208ENST00000542557 PPP2CAP67775 309 aa6.13□□□□□ -1.43
PTPRO-208ENST00000542557 BTN3A2P78410 334 aa6.13□□□□□ -1.43
PTPRO-208ENST00000542557 BNC1Q01954 994 aa6.13□□□□□ -1.43
PTPRO-208ENST00000542557 KIR2DS3Q14952 304 aa6.13□□□□□ -1.43
PTPRO-208ENST00000542557 FAM214AQ32MH5 1076 aa6.13□□□□□ -1.43
PTPRO-208ENST00000542557 MFSD12Q6NUT3 480 aa6.13□□□□□ -1.43
PTPRO-208ENST00000542557 CHRDL2Q6WN34 429 aa6.13□□□□□ -1.43
PTPRO-208ENST00000542557 C16orf62Q7Z3J2 963 aa6.13□□□□□ -1.43
PTPRO-208ENST00000542557 PHC2Q8IXK0 858 aa6.13□□□□□ -1.43
PTPRO-208ENST00000542557 LRRC25Q8N386 305 aaPredicted RBP6.13□□□□□ -1.43
PTPRO-208ENST00000542557 POC5Q8NA72 575 aa6.13□□□□□ -1.43
PTPRO-208ENST00000542557 FLVCR1-AS1Q8TAF5 88 aa6.13□□□□□ -1.43
PTPRO-208ENST00000542557 OR1E3Q8WZA6 343 aa6.13□□□□□ -1.43
PTPRO-208ENST00000542557 TM4SF19Q96DZ7 209 aa6.13□□□□□ -1.43
PTPRO-208ENST00000542557 SMIM10Q96HG1 83 aa6.13□□□□□ -1.43
PTPRO-208ENST00000542557 WDR92Q96MX6 357 aa6.13□□□□□ -1.43
PTPRO-208ENST00000542557 SLC38A2Q96QD8 506 aa6.13□□□□□ -1.43
PTPRO-208ENST00000542557 PLA2G12AQ9BZM1 189 aa6.13□□□□□ -1.43
PTPRO-208ENST00000542557 CERS4Q9HA82 394 aa6.13□□□□□ -1.43
PTPRO-208ENST00000542557 SRA1Q9HD15 236 aaKnown RBP6.13□□□□□ -1.43
PTPRO-208ENST00000542557 POLE4Q9NR33 117 aa6.13□□□□□ -1.43
PTPRO-208ENST00000542557 MED17Q9NVC6 651 aa6.13□□□□□ -1.43
PTPRO-208ENST00000542557 QPCTLQ9NXS2 382 aa6.13□□□□□ -1.43
PTPRO-208ENST00000542557 EXOSC1Q9Y3B2 195 aaKnown RBP6.13□□□□□ -1.43
PTPRO-208ENST00000542557 CHST2Q9Y4C5 530 aa6.13□□□□□ -1.43
PTPRO-208ENST00000542557 TICRRQ7Z2Z1 1910 aa6.13□□□□□ -1.43
PTPRO-208ENST00000542557 TBC1D3DA0A087WVF3 549 aa6.13□□□□□ -1.43
PTPRO-208ENST00000542557 TBC1D3IA0A087WXS9 549 aa6.13□□□□□ -1.43
PTPRO-208ENST00000542557 TBC1D3EA0A087X179 549 aa6.13□□□□□ -1.43
PTPRO-208ENST00000542557 TBC1D3KA0A087X1G2 549 aa6.13□□□□□ -1.43
PTPRO-208ENST00000542557 IQCMA0A1B0GVH7 501 aa6.13□□□□□ -1.43
PTPRO-208ENST00000542557 A0A1W2PS29 197 aa6.13□□□□□ -1.43
PTPRO-208ENST00000542557 SLC35F4A4IF30 521 aa6.13□□□□□ -1.43
PTPRO-208ENST00000542557 A6NCN8 305 aa6.13□□□□□ -1.43
PTPRO-208ENST00000542557 TBC1D3FA6NER0 549 aaPredicted RBP6.13□□□□□ -1.43
PTPRO-208ENST00000542557 URADA6NGE7 173 aa6.13□□□□□ -1.43
PTPRO-208ENST00000542557 TBC1D3LB9A6J9 549 aa6.13□□□□□ -1.43
PTPRO-208ENST00000542557 BTN3A3O00478 584 aa6.13□□□□□ -1.43
PTPRO-208ENST00000542557 AP3D1O14617 1153 aa6.13□□□□□ -1.43
PTPRO-208ENST00000542557 APBB3O95704 486 aa6.13□□□□□ -1.43
PTPRO-208ENST00000542557 IFI6P09912 130 aa6.13□□□□□ -1.43
PTPRO-208ENST00000542557 TBC1D3HP0C7X1 549 aa6.13□□□□□ -1.43
PTPRO-208ENST00000542557 ZNF888P0CJ79 500 aaPredicted RBP6.13□□□□□ -1.43
PTPRO-208ENST00000542557 HOXB2P14652 356 aa6.13□□□□□ -1.43
PTPRO-208ENST00000542557 MYL12AP19105 171 aa6.13□□□□□ -1.43
PTPRO-208ENST00000542557 EN2P19622 333 aaPredicted RBP6.13□□□□□ -1.43
PTPRO-208ENST00000542557 MAT2AP31153 395 aaKnown RBP6.13□□□□□ -1.43
PTPRO-208ENST00000542557 PTGER1P34995 402 aa6.13□□□□□ -1.43
PTPRO-208ENST00000542557 STAT5AP42229 794 aa6.13□□□□□ -1.43
PTPRO-208ENST00000542557 RORCP51449 518 aa6.13□□□□□ -1.43
PTPRO-208ENST00000542557 WNT4P56705 351 aa6.13□□□□□ -1.43
PTPRO-208ENST00000542557 DEFA1P59665 94 aa6.13□□□□□ -1.43
PTPRO-208ENST00000542557 DEFA3P59666 94 aa6.13□□□□□ -1.43
PTPRO-208ENST00000542557 SLC13A2Q13183 592 aa6.13□□□□□ -1.43
PTPRO-208ENST00000542557 SUZ12Q15022 739 aaKnown RBP6.13□□□□□ -1.43
PTPRO-208ENST00000542557 SNAPC1Q16533 368 aa6.13□□□□□ -1.43
PTPRO-208ENST00000542557 DECR1Q16698 335 aa6.13□□□□□ -1.43
PTPRO-208ENST00000542557 C9orf50Q5SZB4 431 aa6.13□□□□□ -1.43
PTPRO-208ENST00000542557 TBC1D3GQ6DHY5 549 aa6.13□□□□□ -1.43
PTPRO-208ENST00000542557 TBC1D3CQ6IPX1 549 aa6.13□□□□□ -1.43
PTPRO-208ENST00000542557 FAM111BQ6SJ93 734 aa6.13□□□□□ -1.43
PTPRO-208ENST00000542557 FRRS1Q6ZNA5 592 aa6.13□□□□□ -1.43
PTPRO-208ENST00000542557 BCDIN3DQ7Z5W3 292 aaKnown RBP6.13□□□□□ -1.43
PTPRO-208ENST00000542557 VRK2Q86Y07 508 aa6.13□□□□□ -1.43
PTPRO-208ENST00000542557 TBC1D3Q8IZP1 549 aaPredicted RBP6.13□□□□□ -1.43
PTPRO-208ENST00000542557 OR2L13Q8N349 312 aa6.13□□□□□ -1.43
PTPRO-208ENST00000542557 CLIP4Q8N3C7 705 aa6.13□□□□□ -1.43
PTPRO-208ENST00000542557 CLDN22Q8N7P3 220 aa6.13□□□□□ -1.43
PTPRO-208ENST00000542557 OR52P1PQ8NH57 321 aa6.13□□□□□ -1.43
PTPRO-208ENST00000542557 PIGXQ8TBF5 258 aa6.13□□□□□ -1.43
PTPRO-208ENST00000542557 ADAMTS15Q8TE58 950 aa6.13□□□□□ -1.43
PTPRO-208ENST00000542557 CHAC2Q8WUX2 184 aa6.13□□□□□ -1.43
PTPRO-208ENST00000542557 ACOT11Q8WXI4 607 aaPredicted RBP6.13□□□□□ -1.43
PTPRO-208ENST00000542557 TXNDC15Q96J42 360 aa6.13□□□□□ -1.43
PTPRO-208ENST00000542557 SLC30A2Q9BRI3 323 aa6.13□□□□□ -1.43
PTPRO-208ENST00000542557 QRSL1Q9H0R6 528 aaKnown RBP6.13□□□□□ -1.43
PTPRO-208ENST00000542557 SRMSQ9H3Y6 488 aa6.13□□□□□ -1.43
PTPRO-208ENST00000542557 POLMQ9NP87 494 aaPredicted RBP6.13□□□□□ -1.43
PTPRO-208ENST00000542557 SEMA4GQ9NTN9 838 aa6.13□□□□□ -1.43
PTPRO-208ENST00000542557 PTGFRNQ9P2B2 879 aa6.13□□□□□ -1.43
PTPRO-208ENST00000542557 SSR3Q9UNL2 185 aa6.13□□□□□ -1.43
PTPRO-208ENST00000542557 POM121BA6NF01 834 aa6.12□□□□□ -1.43
PTPRO-208ENST00000542557 ALG1L2C9J202 215 aa6.12□□□□□ -1.43
PTPRO-208ENST00000542557 TNFRSF10CO14798 259 aa6.12□□□□□ -1.43
PTPRO-208ENST00000542557 SLC31A1O15431 190 aa6.12□□□□□ -1.43
PTPRO-208ENST00000542557 KLF4O43474 513 aa6.12□□□□□ -1.43
PTPRO-208ENST00000542557 ZIC2O95409 532 aaPredicted RBP6.12□□□□□ -1.43
PTPRO-208ENST00000542557 EML2O95834 649 aa6.12□□□□□ -1.43
PTPRO-208ENST00000542557 IL1AP01583 271 aa6.12□□□□□ -1.43
PTPRO-208ENST00000542557 THBS1P07996 1170 aa6.12□□□□□ -1.43
PTPRO-208ENST00000542557 CCNYL3P0C7X3 344 aa6.12□□□□□ -1.43
PTPRO-208ENST00000542557 COL9A1P20849 921 aa6.12□□□□□ -1.43
PTPRO-208ENST00000542557 ZNF10P21506 573 aaPredicted RBP6.12□□□□□ -1.43
PTPRO-208ENST00000542557 RPS19P39019 145 aaKnown RBP6.12□□□□□ -1.43
PTPRO-208ENST00000542557 PDX1P52945 283 aa6.12□□□□□ -1.43
PTPRO-208ENST00000542557 LSM11P83369 360 aaKnown RBP eCLIP6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms