RNA–Protein interactions for RNA: ENST00000541513.2

DDB1-219, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 958 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-219ENST00000541513 FPR3P25089 353 aa5.07□□□□□ -1.6
DDB1-219ENST00000541513 PSMA2P25787 234 aa5.07□□□□□ -1.6
DDB1-219ENST00000541513 LCN1P31025 176 aa5.07□□□□□ -1.6
DDB1-219ENST00000541513 APOBEC3AP31941 199 aaPredicted RBP5.07□□□□□ -1.6
DDB1-219ENST00000541513 SLC26A2P50443 739 aa5.07□□□□□ -1.6
DDB1-219ENST00000541513 CCR4P51679 360 aa5.07□□□□□ -1.6
DDB1-219ENST00000541513 ATP12AP54707 1039 aa5.07□□□□□ -1.6
DDB1-219ENST00000541513 S100A12P80511 92 aa5.07□□□□□ -1.6
DDB1-219ENST00000541513 ZXDBP98169 803 aa5.07□□□□□ -1.6
DDB1-219ENST00000541513 PJVKQ0ZLH3 352 aa5.07□□□□□ -1.6
DDB1-219ENST00000541513 VEZF1Q14119 521 aa5.07□□□□□ -1.6
DDB1-219ENST00000541513 TMEM132DQ14C87 1099 aa5.07□□□□□ -1.6
DDB1-219ENST00000541513 ANGPT1Q15389 498 aa5.07□□□□□ -1.6
DDB1-219ENST00000541513 LINC01620Q4KN68 170 aa5.07□□□□□ -1.6
DDB1-219ENST00000541513 CT45A2Q5DJT8 189 aa5.07□□□□□ -1.6
DDB1-219ENST00000541513 CAPN13Q6MZZ7 669 aaPredicted RBP5.07□□□□□ -1.6
DDB1-219ENST00000541513 RNASEKQ6P5S7 137 aaKnown RBP5.07□□□□□ -1.6
DDB1-219ENST00000541513 CCDC25Q86WR0 208 aa5.07□□□□□ -1.6
DDB1-219ENST00000541513 CHSY1Q86X52 802 aa5.07□□□□□ -1.6
DDB1-219ENST00000541513 BEST3Q8N1M1 668 aa5.07□□□□□ -1.6
DDB1-219ENST00000541513 LINC00301Q8NCQ3 95 aa5.07□□□□□ -1.6
DDB1-219ENST00000541513 FAM83FQ8NEG4 500 aaPredicted RBP5.07□□□□□ -1.6
DDB1-219ENST00000541513 OR5AU1Q8NGC0 362 aa5.07□□□□□ -1.6
DDB1-219ENST00000541513 ZNF461Q8TAF7 563 aa5.07□□□□□ -1.6
DDB1-219ENST00000541513 LRRC20Q8TCA0 184 aa5.07□□□□□ -1.6
DDB1-219ENST00000541513 DTX3LQ8TDB6 740 aa5.07□□□□□ -1.6
DDB1-219ENST00000541513 SLC38A4Q969I6 547 aa5.07□□□□□ -1.6
DDB1-219ENST00000541513 ZG16BQ96DA0 208 aa5.07□□□□□ -1.6
DDB1-219ENST00000541513 TM4SF19Q96DZ7 209 aa5.07□□□□□ -1.6
DDB1-219ENST00000541513 PBKQ96KB5 322 aa5.07□□□□□ -1.6
DDB1-219ENST00000541513 MARK4Q96L34 752 aa5.07□□□□□ -1.6
DDB1-219ENST00000541513 GLT1D1Q96MS3 346 aa5.07□□□□□ -1.6
DDB1-219ENST00000541513 VSTM2LQ96N03 204 aa5.07□□□□□ -1.6
DDB1-219ENST00000541513 TSNARE1Q96NA8 513 aa5.07□□□□□ -1.6
DDB1-219ENST00000541513 SLC29A1Q99808 456 aa5.07□□□□□ -1.6
DDB1-219ENST00000541513 RAB34Q9BZG1 259 aa5.07□□□□□ -1.6
DDB1-219ENST00000541513 SHCBP1LQ9BZQ2 653 aa5.07□□□□□ -1.6
DDB1-219ENST00000541513 TRIM9Q9C026 710 aa5.07□□□□□ -1.6
DDB1-219ENST00000541513 C11orf49Q9H6J7 331 aa5.07□□□□□ -1.6
DDB1-219ENST00000541513 SLA2Q9H6Q3 261 aa5.07□□□□□ -1.6
DDB1-219ENST00000541513 MCCC2Q9HCC0 563 aa5.07□□□□□ -1.6
DDB1-219ENST00000541513 NOX4Q9NPH5 578 aa5.07□□□□□ -1.6
DDB1-219ENST00000541513 DUSP22Q9NRW4 184 aa5.07□□□□□ -1.6
DDB1-219ENST00000541513 DDX28Q9NUL7 540 aaKnown RBP5.07□□□□□ -1.6
DDB1-219ENST00000541513 AHSPQ9NZD4 102 aa5.07□□□□□ -1.6
DDB1-219ENST00000541513 ZKSCAN7Q9P0L1 754 aaPredicted RBP5.07□□□□□ -1.6
DDB1-219ENST00000541513 UXTQ9UBK9 157 aaPredicted RBP5.07□□□□□ -1.6
DDB1-219ENST00000541513 OAZ3Q9UMX2 235 aa5.07□□□□□ -1.6
DDB1-219ENST00000541513 LTBP2Q14767 1821 aa5.07□□□□□ -1.6
DDB1-219ENST00000541513 COL1A2P08123 1366 aa5.06□□□□□ -1.6
DDB1-219ENST00000541513 SCN5AQ14524 2016 aa5.06□□□□□ -1.6
DDB1-219ENST00000541513 MROH7Q68CQ1 1323 aa5.06□□□□□ -1.6
DDB1-219ENST00000541513 PPIAL4EA0A075B759 164 aa5.06□□□□□ -1.6
DDB1-219ENST00000541513 LOC105378220A0A1B0GUY1 285 aaPredicted RBP5.06□□□□□ -1.6
DDB1-219ENST00000541513 PRSS51A0A1B0GVH4 220 aa5.06□□□□□ -1.6
DDB1-219ENST00000541513 GOLGA8IPA6NC78 632 aa5.06□□□□□ -1.6
DDB1-219ENST00000541513 GOLGA6L9A6NEM1 432 aa5.06□□□□□ -1.6
DDB1-219ENST00000541513 GOLGA8JA6NMD2 632 aa5.06□□□□□ -1.6
DDB1-219ENST00000541513 PDZK1P1A8MUH7 402 aa5.06□□□□□ -1.6
DDB1-219ENST00000541513 FAM90A26D6RGX4 464 aa5.06□□□□□ -1.6
DDB1-219ENST00000541513 GOLGA8RI6L899 631 aa5.06□□□□□ -1.6
DDB1-219ENST00000541513 BTN3A3O00478 584 aa5.06□□□□□ -1.6
DDB1-219ENST00000541513 CHUKO15111 745 aa5.06□□□□□ -1.6
DDB1-219ENST00000541513 RAD51BO15315 384 aa5.06□□□□□ -1.6
DDB1-219ENST00000541513 HCN1O60741 890 aa5.06□□□□□ -1.6
DDB1-219ENST00000541513 MYO1DO94832 1006 aa5.06□□□□□ -1.6
DDB1-219ENST00000541513 OR2F2O95006 317 aa5.06□□□□□ -1.6
DDB1-219ENST00000541513 LYPLA2O95372 231 aa5.06□□□□□ -1.6
DDB1-219ENST00000541513 MT-CO3P00414 261 aa5.06□□□□□ -1.6
DDB1-219ENST00000541513 RAF1P04049 648 aa5.06□□□□□ -1.6
DDB1-219ENST00000541513 ZNF286BP0CG31 522 aa5.06□□□□□ -1.6
DDB1-219ENST00000541513 PPIAL4FP0DN26 164 aa5.06□□□□□ -1.6
DDB1-219ENST00000541513 ACKR3P25106 362 aa5.06□□□□□ -1.6
DDB1-219ENST00000541513 SSTR1P30872 391 aa5.06□□□□□ -1.6
DDB1-219ENST00000541513 NAA10P41227 235 aaPredicted RBP5.06□□□□□ -1.6
DDB1-219ENST00000541513 MAGEA9P43362 315 aa5.06□□□□□ -1.6
DDB1-219ENST00000541513 QARSP47897 775 aaKnown RBP5.06□□□□□ -1.6
DDB1-219ENST00000541513 KCNJ3P48549 501 aa5.06□□□□□ -1.6
DDB1-219ENST00000541513 COMPP49747 757 aaPredicted RBP5.06□□□□□ -1.6
DDB1-219ENST00000541513 COPB1P53618 953 aaKnown RBP5.06□□□□□ -1.6
DDB1-219ENST00000541513 INHBCP55103 352 aa5.06□□□□□ -1.6
DDB1-219ENST00000541513 CDH6P55285 790 aa5.06□□□□□ -1.6
DDB1-219ENST00000541513 KCNK10P57789 538 aa5.06□□□□□ -1.6
DDB1-219ENST00000541513 PSMC5P62195 406 aa5.06□□□□□ -1.6
DDB1-219ENST00000541513 SP4Q02446 784 aa5.06□□□□□ -1.6
DDB1-219ENST00000541513 EEF1A2Q05639 463 aaKnown RBP5.06□□□□□ -1.6
DDB1-219ENST00000541513 FOXM1Q08050 763 aa5.06□□□□□ -1.6
DDB1-219ENST00000541513 RCAN2Q14206 197 aa5.06□□□□□ -1.6
DDB1-219ENST00000541513 GPR176Q14439 515 aa5.06□□□□□ -1.6
DDB1-219ENST00000541513 IL17AQ16552 155 aa5.06□□□□□ -1.6
DDB1-219ENST00000541513 PDZK1Q5T2W1 519 aa5.06□□□□□ -1.6
DDB1-219ENST00000541513 LIPKQ5VXJ0 399 aa5.06□□□□□ -1.6
DDB1-219ENST00000541513 SPECC1LQ69YQ0 1117 aa5.06□□□□□ -1.6
DDB1-219ENST00000541513 NEPROQ6NW34 567 aa5.06□□□□□ -1.6
DDB1-219ENST00000541513 ARMC6Q6NXE6 501 aa5.06□□□□□ -1.6
DDB1-219ENST00000541513 TMEM107Q6UX40 140 aa5.06□□□□□ -1.6
DDB1-219ENST00000541513 CXCL17Q6UXB2 119 aa5.06□□□□□ -1.6
DDB1-219ENST00000541513 GPRIN3Q6ZVF9 776 aa5.06□□□□□ -1.6
DDB1-219ENST00000541513 TGIF2LXQ8IUE1 241 aa5.06□□□□□ -1.6
DDB1-219ENST00000541513 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms