RNA–Protein interactions for RNA: ENST00000541259.1

DDX55-208, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-208ENST00000541259 ZZZ3Q8IYH5 903 aa8.64□□□□□ -1.03
DDX55-208ENST00000541259 LGI4Q8N135 537 aa8.64□□□□□ -1.03
DDX55-208ENST00000541259 ZNF441Q8N8Z8 693 aa8.64□□□□□ -1.03
DDX55-208ENST00000541259 CDRT4Q8N9R6 151 aa8.64□□□□□ -1.03
DDX55-208ENST00000541259 GPR151Q8TDV0 419 aa8.64□□□□□ -1.03
DDX55-208ENST00000541259 ADAMTS15Q8TE58 950 aa8.64□□□□□ -1.03
DDX55-208ENST00000541259 XAGE5Q8WWM1 108 aa8.64□□□□□ -1.03
DDX55-208ENST00000541259 UTP4Q969X6 686 aaKnown RBP8.64□□□□□ -1.03
DDX55-208ENST00000541259 SH3GL1Q99961 368 aa8.64□□□□□ -1.03
DDX55-208ENST00000541259 DEFB126Q9BYW3 111 aa8.64□□□□□ -1.03
DDX55-208ENST00000541259 NXF5Q9H1B4 397 aaKnown RBP8.64□□□□□ -1.03
DDX55-208ENST00000541259 PIGUQ9H490 435 aa8.64□□□□□ -1.03
DDX55-208ENST00000541259 RAD21L1Q9H4I0 556 aa8.64□□□□□ -1.03
DDX55-208ENST00000541259 FBXO34Q9NWN3 711 aa8.64□□□□□ -1.03
DDX55-208ENST00000541259 PRODH2Q9UF12 536 aa8.64□□□□□ -1.03
DDX55-208ENST00000541259 ZMIZ1Q9ULJ6 1067 aa8.64□□□□□ -1.03
DDX55-208ENST00000541259 CORO2BQ9UQ03 480 aa8.64□□□□□ -1.03
DDX55-208ENST00000541259 GPR55Q9Y2T6 319 aaPredicted RBP8.64□□□□□ -1.03
DDX55-208ENST00000541259 HEATR5AQ86XA9 2040 aa8.63□□□□□ -1.03
DDX55-208ENST00000541259 LOC400499M0QZD8 3231 aa8.63□□□□□ -1.03
DDX55-208ENST00000541259 A8MUI8 341 aa8.63□□□□□ -1.03
DDX55-208ENST00000541259 A8MVJ9 347 aa8.63□□□□□ -1.03
DDX55-208ENST00000541259 TMEM229AB2RXF0 380 aa8.63□□□□□ -1.03
DDX55-208ENST00000541259 ZFAND5O76080 213 aa8.63□□□□□ -1.03
DDX55-208ENST00000541259 IGKV1D-16P01601 117 aa8.63□□□□□ -1.03
DDX55-208ENST00000541259 SERPINA7P05543 415 aa8.63□□□□□ -1.03
DDX55-208ENST00000541259 TFPTP0C1Z6 253 aa8.63□□□□□ -1.03
DDX55-208ENST00000541259 ARAFP10398 606 aa8.63□□□□□ -1.03
DDX55-208ENST00000541259 DRD5P21918 477 aa8.63□□□□□ -1.03
DDX55-208ENST00000541259 PGM1P36871 562 aa8.63□□□□□ -1.03
DDX55-208ENST00000541259 PPICP45877 212 aa8.63□□□□□ -1.03
DDX55-208ENST00000541259 KCNJ2P63252 427 aa8.63□□□□□ -1.03
DDX55-208ENST00000541259 ZNHIT3Q15649 155 aaPredicted RBP8.63□□□□□ -1.03
DDX55-208ENST00000541259 CYP51A1Q16850 503 aa8.63□□□□□ -1.03
DDX55-208ENST00000541259 DEFB109BQ30KR1 87 aa8.63□□□□□ -1.03
DDX55-208ENST00000541259 DNAL1Q4LDG9 190 aa8.63□□□□□ -1.03
DDX55-208ENST00000541259 GCNT6Q5T4J0 391 aa8.63□□□□□ -1.03
DDX55-208ENST00000541259 CCNJQ5T5M9 372 aa8.63□□□□□ -1.03
DDX55-208ENST00000541259 HLA-DQA1Q5Y7H0 255 aa8.63□□□□□ -1.03
DDX55-208ENST00000541259 B3GNTL1Q67FW5 361 aaPredicted RBP8.63□□□□□ -1.03
DDX55-208ENST00000541259 TCTN3Q6NUS6 607 aa8.63□□□□□ -1.03
DDX55-208ENST00000541259 PGM2L1Q6PCE3 622 aa8.63□□□□□ -1.03
DDX55-208ENST00000541259 UNQ6494/PRO21346Q6UXR6 183 aa8.63□□□□□ -1.03
DDX55-208ENST00000541259 ZNF771Q7L3S4 317 aaPredicted RBP8.63□□□□□ -1.03
DDX55-208ENST00000541259 ERMP1Q7Z2K6 904 aa8.63□□□□□ -1.03
DDX55-208ENST00000541259 NET1Q7Z628 596 aaPredicted RBP8.63□□□□□ -1.03
DDX55-208ENST00000541259 SERPINA11Q86U17 422 aa8.63□□□□□ -1.03
DDX55-208ENST00000541259 HPS6Q86YV9 775 aa8.63□□□□□ -1.03
DDX55-208ENST00000541259 KBTBD2Q8IY47 623 aa8.63□□□□□ -1.03
DDX55-208ENST00000541259 PRR22Q8IZ63 422 aa8.63□□□□□ -1.03
DDX55-208ENST00000541259 SIRT6Q8N6T7 355 aa8.63□□□□□ -1.03
DDX55-208ENST00000541259 ANKFN1Q8N957 763 aa8.63□□□□□ -1.03
DDX55-208ENST00000541259 OR8K3Q8NH51 312 aa8.63□□□□□ -1.03
DDX55-208ENST00000541259 NFKBIDQ8NI38 313 aa8.63□□□□□ -1.03
DDX55-208ENST00000541259 BRIX1Q8TDN6 353 aaKnown RBP8.63□□□□□ -1.03
DDX55-208ENST00000541259 PSMF1Q92530 271 aa8.63□□□□□ -1.03
DDX55-208ENST00000541259 THOC3Q96J01 351 aaKnown RBP8.63□□□□□ -1.03
DDX55-208ENST00000541259 VPS50Q96JG6 964 aa8.63□□□□□ -1.03
DDX55-208ENST00000541259 LCORQ96JN0 433 aaPredicted RBP8.63□□□□□ -1.03
DDX55-208ENST00000541259 IP6K3Q96PC2 410 aa8.63□□□□□ -1.03
DDX55-208ENST00000541259 BTBD9Q96Q07 612 aa8.63□□□□□ -1.03
DDX55-208ENST00000541259 STACQ99469 402 aa8.63□□□□□ -1.03
DDX55-208ENST00000541259 PCDHAC1Q9H158 963 aa8.63□□□□□ -1.03
DDX55-208ENST00000541259 CDCP1Q9H5V8 836 aa8.63□□□□□ -1.03
DDX55-208ENST00000541259 CPNE5Q9HCH3 593 aa8.63□□□□□ -1.03
DDX55-208ENST00000541259 ATP13A2Q9NQ11 1180 aa8.63□□□□□ -1.03
DDX55-208ENST00000541259 DUSP22Q9NRW4 184 aa8.63□□□□□ -1.03
DDX55-208ENST00000541259 PRPF19Q9UMS4 504 aaKnown RBP8.63□□□□□ -1.03
DDX55-208ENST00000541259 CFL2Q9Y281 166 aa8.63□□□□□ -1.03
DDX55-208ENST00000541259 FREM3P0C091 2139 aa8.62□□□□□ -1.03
DDX55-208ENST00000541259 FRG2CA6NGY1 282 aa8.62□□□□□ -1.03
DDX55-208ENST00000541259 A6NL46 340 aa8.62□□□□□ -1.03
DDX55-208ENST00000541259 FAM220BPB1ANY3 271 aa8.62□□□□□ -1.03
DDX55-208ENST00000541259 ASNA1O43681 348 aa8.62□□□□□ -1.03
DDX55-208ENST00000541259 SLC28A2O43868 658 aa8.62□□□□□ -1.03
DDX55-208ENST00000541259 FCMRO60667 390 aa8.62□□□□□ -1.03
DDX55-208ENST00000541259 DNAJA2O60884 412 aa8.62□□□□□ -1.03
DDX55-208ENST00000541259 GCM2O75603 506 aaPredicted RBP8.62□□□□□ -1.03
DDX55-208ENST00000541259 DNAJB5O75953 348 aa8.62□□□□□ -1.03
DDX55-208ENST00000541259 KCNK2O95069 426 aa8.62□□□□□ -1.03
DDX55-208ENST00000541259 NADKO95544 446 aaPredicted RBP8.62□□□□□ -1.03
DDX55-208ENST00000541259 IL2RAP01589 272 aa8.62□□□□□ -1.03
DDX55-208ENST00000541259 CHRM4P08173 479 aa8.62□□□□□ -1.03
DDX55-208ENST00000541259 ICAM2P13598 275 aa8.62□□□□□ -1.03
DDX55-208ENST00000541259 HSD17B1P14061 328 aa8.62□□□□□ -1.03
DDX55-208ENST00000541259 NCK1P16333 377 aa8.62□□□□□ -1.03
DDX55-208ENST00000541259 ITGA3P26006 1051 aa8.62□□□□□ -1.03
DDX55-208ENST00000541259 TRHRP34981 398 aaPredicted RBP8.62□□□□□ -1.03
DDX55-208ENST00000541259 RFX3P48380 749 aa8.62□□□□□ -1.03
DDX55-208ENST00000541259 DCAF7P61962 342 aa8.62□□□□□ -1.03
DDX55-208ENST00000541259 POU6F2P78424 691 aaPredicted RBP8.62□□□□□ -1.03
DDX55-208ENST00000541259 MRPS22P82650 360 aaKnown RBP8.62□□□□□ -1.03
DDX55-208ENST00000541259 MS4A2Q01362 244 aa8.62□□□□□ -1.03
DDX55-208ENST00000541259 TLE3Q04726 772 aa8.62□□□□□ -1.03
DDX55-208ENST00000541259 AIMP2Q13155 320 aaKnown RBP8.62□□□□□ -1.03
DDX55-208ENST00000541259 RAPSNQ13702 412 aa8.62□□□□□ -1.03
DDX55-208ENST00000541259 SCARB2Q14108 478 aa8.62□□□□□ -1.03
DDX55-208ENST00000541259 VMACQ2NL98 169 aa8.62□□□□□ -1.03
DDX55-208ENST00000541259 RPS26P11Q5JNZ5 115 aaPredicted RBP8.62□□□□□ -1.03
DDX55-208ENST00000541259 SAMD4BQ5PRF9 694 aaKnown RBP8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms