RNA–Protein interactions for RNA: ENST00000540998.5

CDC42SE1-207, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDC42SE1, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-207ENST00000540998 ZNF689Q96CS4 500 aaPredicted RBP9.73□□□□□ -0.85
CDC42SE1-207ENST00000540998 TMEM43Q9BTV4 400 aa9.73□□□□□ -0.85
CDC42SE1-207ENST00000540998 LGR4Q9BXB1 951 aa9.73□□□□□ -0.85
CDC42SE1-207ENST00000540998 HCAR1Q9BXC0 346 aa9.73□□□□□ -0.85
CDC42SE1-207ENST00000540998 NARFLQ9H6Q4 476 aa9.73□□□□□ -0.85
CDC42SE1-207ENST00000540998 MRPS7Q9Y2R9 242 aaKnown RBP9.73□□□□□ -0.85
CDC42SE1-207ENST00000540998 IRAK3Q9Y616 596 aa9.73□□□□□ -0.85
CDC42SE1-207ENST00000540998 A0A0A6YYJ9 748 aa9.73□□□□□ -0.85
CDC42SE1-207ENST00000540998 EEF1E1O43324 174 aaKnown RBP9.73□□□□□ -0.85
CDC42SE1-207ENST00000540998 PI15O43692 258 aa9.73□□□□□ -0.85
CDC42SE1-207ENST00000540998 FCMRO60667 390 aa9.73□□□□□ -0.85
CDC42SE1-207ENST00000540998 TOXO94900 526 aa9.73□□□□□ -0.85
CDC42SE1-207ENST00000540998 SHC1P29353 583 aa9.73□□□□□ -0.85
CDC42SE1-207ENST00000540998 EVX1P49640 407 aa9.73□□□□□ -0.85
CDC42SE1-207ENST00000540998 PCBP4P57723 403 aaKnown RBP9.73□□□□□ -0.85
CDC42SE1-207ENST00000540998 SLC7A9P82251 487 aa9.73□□□□□ -0.85
CDC42SE1-207ENST00000540998 ZNF33BQ06732 778 aa9.73□□□□□ -0.85
CDC42SE1-207ENST00000540998 FZD5Q13467 585 aa9.73□□□□□ -0.85
CDC42SE1-207ENST00000540998 GPR176Q14439 515 aa9.73□□□□□ -0.85
CDC42SE1-207ENST00000540998 MPP7Q5T2T1 576 aa9.73□□□□□ -0.85
CDC42SE1-207ENST00000540998 NDUFAF5Q5TEU4 345 aa9.73□□□□□ -0.85
CDC42SE1-207ENST00000540998 C18orf63Q68DL7 685 aa9.73□□□□□ -0.85
CDC42SE1-207ENST00000540998 SIGIRRQ6IA17 410 aa9.73□□□□□ -0.85
CDC42SE1-207ENST00000540998 TMEM163Q8TC26 289 aa9.73□□□□□ -0.85
CDC42SE1-207ENST00000540998 TMEM255BQ8WV15 326 aa9.73□□□□□ -0.85
CDC42SE1-207ENST00000540998 IRF7Q92985 503 aa9.73□□□□□ -0.85
CDC42SE1-207ENST00000540998 ZNF607Q96SK3 696 aa9.73□□□□□ -0.85
CDC42SE1-207ENST00000540998 ARHGAP9Q9BRR9 750 aa9.73□□□□□ -0.85
CDC42SE1-207ENST00000540998 C1QTNF6Q9BXI9 259 aa9.73□□□□□ -0.85
CDC42SE1-207ENST00000540998 ZNF222Q9UK12 451 aa9.73□□□□□ -0.85
CDC42SE1-207ENST00000540998 A8MUA0 341 aa9.72□□□□□ -0.85
CDC42SE1-207ENST00000540998 CDC42EP2O14613 210 aa9.72□□□□□ -0.85
CDC42SE1-207ENST00000540998 PRODHO43272 600 aa9.72□□□□□ -0.85
CDC42SE1-207ENST00000540998 REM1O75628 298 aa9.72□□□□□ -0.85
CDC42SE1-207ENST00000540998 UBXN7O94888 489 aa9.72□□□□□ -0.85
CDC42SE1-207ENST00000540998 SMSP52788 366 aa9.72□□□□□ -0.85
CDC42SE1-207ENST00000540998 SLC16A1P53985 500 aa9.72□□□□□ -0.85
CDC42SE1-207ENST00000540998 SRP54P61011 504 aaKnown RBP9.72□□□□□ -0.85
CDC42SE1-207ENST00000540998 RRAS2P62070 204 aaPredicted RBP9.72□□□□□ -0.85
CDC42SE1-207ENST00000540998 EFNB1P98172 346 aa9.72□□□□□ -0.85
CDC42SE1-207ENST00000540998 CAMK1Q14012 370 aa9.72□□□□□ -0.85
CDC42SE1-207ENST00000540998 ELOAQ14241 798 aaKnown RBP9.72□□□□□ -0.85
CDC42SE1-207ENST00000540998 ZNF805Q5CZA5 627 aa9.72□□□□□ -0.85
CDC42SE1-207ENST00000540998 ZDHHC20Q5W0Z9 365 aa9.72□□□□□ -0.85
CDC42SE1-207ENST00000540998 SLC27A4Q6P1M0 643 aa9.72□□□□□ -0.85
CDC42SE1-207ENST00000540998 IZUMO1Q8IYV9 350 aa9.72□□□□□ -0.85
CDC42SE1-207ENST00000540998 ARIH2OSQ8N7S6 290 aa9.72□□□□□ -0.85
CDC42SE1-207ENST00000540998 HSD17B8Q92506 261 aa9.72□□□□□ -0.85
CDC42SE1-207ENST00000540998 DACT3Q96B18 629 aaPredicted RBP9.72□□□□□ -0.85
CDC42SE1-207ENST00000540998 ORAI1Q96D31 301 aa9.72□□□□□ -0.85
CDC42SE1-207ENST00000540998 METTL2AQ96IZ6 378 aaKnown RBP9.72□□□□□ -0.85
CDC42SE1-207ENST00000540998 ZNF558Q96NG5 402 aa9.72□□□□□ -0.85
CDC42SE1-207ENST00000540998 MS4A8Q9BY19 250 aa9.72□□□□□ -0.85
CDC42SE1-207ENST00000540998 SLC28A3Q9HAS3 691 aa9.72□□□□□ -0.85
CDC42SE1-207ENST00000540998 NUDT15Q9NV35 164 aa9.72□□□□□ -0.85
CDC42SE1-207ENST00000540998 WSB2Q9NYS7 404 aaPredicted RBP9.72□□□□□ -0.85
CDC42SE1-207ENST00000540998 MRPL15Q9P015 296 aaKnown RBP9.72□□□□□ -0.85
CDC42SE1-207ENST00000540998 P2RX2Q9UBL9 471 aa9.72□□□□□ -0.85
CDC42SE1-207ENST00000540998 ACAD8Q9UKU7 415 aa9.72□□□□□ -0.85
CDC42SE1-207ENST00000540998 CHST2Q9Y4C5 530 aa9.72□□□□□ -0.85
CDC42SE1-207ENST00000540998 MDC1Q14676 2089 aaKnown RBP9.72□□□□□ -0.85
CDC42SE1-207ENST00000540998 TRPM6Q9BX84 2022 aa9.72□□□□□ -0.85
CDC42SE1-207ENST00000540998 A0A1W2PRQ8 180 aa9.72□□□□□ -0.85
CDC42SE1-207ENST00000540998 HOXA2O43364 376 aa9.72□□□□□ -0.85
CDC42SE1-207ENST00000540998 ZIC2O95409 532 aaPredicted RBP9.72□□□□□ -0.85
CDC42SE1-207ENST00000540998 THY1P04216 161 aa9.72□□□□□ -0.85
CDC42SE1-207ENST00000540998 PRKAR1AP10644 381 aa9.72□□□□□ -0.85
CDC42SE1-207ENST00000540998 ERP29P30040 261 aaKnown RBP9.72□□□□□ -0.85
CDC42SE1-207ENST00000540998 GABRA5P31644 462 aa9.72□□□□□ -0.85
CDC42SE1-207ENST00000540998 IFNA8P32881 189 aa9.72□□□□□ -0.85
CDC42SE1-207ENST00000540998 TPBGQ13641 420 aa9.72□□□□□ -0.85
CDC42SE1-207ENST00000540998 POU4F3Q15319 338 aa9.72□□□□□ -0.85
CDC42SE1-207ENST00000540998 C3orf38Q5JPI3 329 aa9.72□□□□□ -0.85
CDC42SE1-207ENST00000540998 EOGTQ5NDL2 527 aa9.72□□□□□ -0.85
CDC42SE1-207ENST00000540998 ANKRD54Q6NXT1 300 aa9.72□□□□□ -0.85
CDC42SE1-207ENST00000540998 SLC36A4Q6YBV0 504 aa9.72□□□□□ -0.85
CDC42SE1-207ENST00000540998 C17orf64Q86WR6 236 aa9.72□□□□□ -0.85
CDC42SE1-207ENST00000540998 CPOQ8IVL8 374 aa9.72□□□□□ -0.85
CDC42SE1-207ENST00000540998 NRMQ8IXM6 262 aa9.72□□□□□ -0.85
CDC42SE1-207ENST00000540998 TCTE3Q8IZS6 198 aa9.72□□□□□ -0.85
CDC42SE1-207ENST00000540998 TMEM99Q8N816 258 aa9.72□□□□□ -0.85
CDC42SE1-207ENST00000540998 SAMD12Q8N8I0 201 aa9.72□□□□□ -0.85
CDC42SE1-207ENST00000540998 ZNF485Q8NCK3 441 aa9.72□□□□□ -0.85
CDC42SE1-207ENST00000540998 TFGQ92734 400 aaPredicted RBP9.72□□□□□ -0.85
CDC42SE1-207ENST00000540998 NXPE3Q969Y0 559 aa9.72□□□□□ -0.85
CDC42SE1-207ENST00000540998 AMDHD1Q96NU7 426 aa9.72□□□□□ -0.85
CDC42SE1-207ENST00000540998 ORAI3Q9BRQ5 295 aa9.72□□□□□ -0.85
CDC42SE1-207ENST00000540998 MYO9BQ13459 2157 aa9.72□□□□□ -0.85
CDC42SE1-207ENST00000540998 LZTS3O60299 673 aaPredicted RBP9.71□□□□□ -0.85
CDC42SE1-207ENST00000540998 LGI1O95970 557 aa9.71□□□□□ -0.85
CDC42SE1-207ENST00000540998 CD3GP09693 182 aa9.71□□□□□ -0.85
CDC42SE1-207ENST00000540998 CLUP10909 449 aa9.71□□□□□ -0.85
CDC42SE1-207ENST00000540998 C6P13671 934 aa9.71□□□□□ -0.85
CDC42SE1-207ENST00000540998 ZNF250P15622 560 aa9.71□□□□□ -0.85
CDC42SE1-207ENST00000540998 ACADLP28330 430 aa9.71□□□□□ -0.85
CDC42SE1-207ENST00000540998 SSR2P43308 183 aa9.71□□□□□ -0.85
CDC42SE1-207ENST00000540998 CLDN20P56880 219 aa9.71□□□□□ -0.85
CDC42SE1-207ENST00000540998 DCDC1P59894 354 aa9.71□□□□□ -0.85
CDC42SE1-207ENST00000540998 PEX5LQ8IYB4 626 aa9.71□□□□□ -0.85
CDC42SE1-207ENST00000540998 GPR135Q8IZ08 494 aa9.71□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms